Example usage for org.apache.commons.io FilenameUtils getExtension

List of usage examples for org.apache.commons.io FilenameUtils getExtension

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  6. getExtension

Introduction

In this page you can find the example usage for org.apache.commons.io FilenameUtils getExtension.

Prototype

public static String getExtension(String filename)

Source Link

Document

Gets the extension of a filename.

Usage

From source file:model.ARXkAnonymiser.java

public static ArrayList<String[]> kAnonimiseData(File csvFile, kAnonData[] kAnonRecords, int kAnon)
        throws IOException {

    /* Check file is of correct type / !null */
    if (csvFile == null || !FilenameUtils.getExtension(csvFile.getAbsolutePath()).equals("csv")) {
        System.out.println("ARXkAnon : invalid file");
        return null;
    }/*  w w  w  .  ja v  a  2  s . c o m*/

    /* Check kAnonData !null */
    if (kAnonRecords == null) {
        System.out.println("ARXkAnon : invalid records (null) ");
        return null;
    }

    /* Check valid input */
    if (kAnon <= 0) {
        System.out.println("ARXkAnon : invalid k Anon value");
        return null;
    }

    //return Arr;
    String[][] outputArr;

    // Define data
    Data data = Data.create(csvFile, StandardCharsets.UTF_8, ',');

    //create arraylist of hierarchies
    Hierarchy[] hierarchies = new Hierarchy[kAnonRecords.length];

    // Define hierarchies
    //Hierarchy age = Hierarchy.create(ageHeirarchyFile,StandardCharsets.UTF_8,',');

    Hierarchy recordHierarchy;
    AttributeType attribute;

    for (kAnonData record : kAnonRecords) {

        //create the Attribute type:
        switch (record.getAttributeType()) {
        //"Identifier","Quasi-Identifier","Sensitive","Insensitive"
        case "Identifier":
            attribute = AttributeType.IDENTIFYING_ATTRIBUTE;
            break;
        case "Quasi-Identifier":
            attribute = AttributeType.QUASI_IDENTIFYING_ATTRIBUTE;
            break;
        case "Sensitive":
            attribute = AttributeType.SENSITIVE_ATTRIBUTE;
            break;
        case "Insensitive":
            attribute = AttributeType.INSENSITIVE_ATTRIBUTE;
            break;
        default:
            attribute = AttributeType.IDENTIFYING_ATTRIBUTE;
        }

        if (record.getAnonHierarchy() != null) {
            recordHierarchy = Hierarchy.create(record.getAnonHierarchy(), StandardCharsets.UTF_8, ',');
            data.getDefinition().setAttributeType(record.getattributeTitle(), recordHierarchy);
        } else {
            data.getDefinition().setAttributeType(record.getattributeTitle(), attribute);
        }

    }

    // Create an instance of the anonymizer
    ARXAnonymizer anonymizer = new ARXAnonymizer();
    ARXConfiguration config = ARXConfiguration.create();
    config.addCriterion(new KAnonymity(kAnon));
    config.setMaxOutliers(1.0d);

    ARXResult result = anonymizer.anonymize(data, config);

    // Print info
    printResult(result, data);

    ArrayList<String[]> outputArrList = new ArrayList<>();

    // Process results
    //System.out.println(" - Transformed data:");
    Iterator<String[]> transformed = result.getOutput(false).iterator();
    while (transformed.hasNext()) {
        //System.out.print("   ");
        String[] transformedData = transformed.next();
        //System.out.println(Arrays.toString(transformedData));
        outputArrList.add(transformedData);
    }

    return outputArrList;

}

From source file:de.uzk.hki.da.utils.SidecarUtils.java

/**
 * TODO remove duplicate from UnpackAction
 * @param file//  w  w w  . ja  va  2 s. c o  m
 * @return
 * @author Daniel M. de Oliveira
 */
public static boolean hasSidecarExtension(String filename, String sidecarExts) {

    String[] sidecarExtensions;
    if (sidecarExts.contains(","))
        sidecarExtensions = sidecarExts.split(",");
    else
        sidecarExtensions = sidecarExts.split(";");

    for (int i = 0; i < sidecarExtensions.length; i++) {
        if (FilenameUtils.getExtension(filename).toLowerCase().equals(sidecarExtensions[i].toLowerCase())) {
            return true;
        }
    }
    return false;
}

From source file:de.uzk.hki.da.utils.FriendlyFilesUtils.java

/**
 * TODO remove duplicate from UnpackAction
 * @param file//ww  w  . j  av a  2s. co m
 * @return
 * @author Daniel M. de Oliveira
 */
public static boolean isFriendlyFileExtension(String filename, String sidecarExts) {

    String[] sidecarExtensions;
    if (sidecarExts.contains(","))
        sidecarExtensions = sidecarExts.split(",");
    else
        sidecarExtensions = sidecarExts.split(";");

    for (int i = 0; i < sidecarExtensions.length; i++) {
        if (FilenameUtils.getExtension(filename).toLowerCase().equals(sidecarExtensions[i].toLowerCase())) {
            return true;
        }
    }
    return false;
}

From source file:com.dnielfe.manager.dialogs.UnpackDialog.java

public static DialogFragment instantiate(File file1) {
    file = file1;//from  w  w w.  j  a v  a 2s .c  om
    ext = FilenameUtils.getExtension(file1.getName());

    final UnpackDialog dialog = new UnpackDialog();
    return dialog;
}

From source file:de.bund.bfr.fskml.ScriptFactory.java

/**
 * /*w ww.j  av a 2  s.com*/
 * @param file A file containing script code (e.g.: R code)
 * @return instance of Script
 * @throws IOException
 */
public static Script createScript(final File file) throws IOException {
    Script script = null;

    String language = FilenameUtils.getExtension(file.getPath());
    if (language.toLowerCase().startsWith("r")) {
        script = new RScript(file);
    }
    if (language.toLowerCase().startsWith("py")) {
        script = new PythonScript(file);
    }

    return script;
}

From source file:ee.ria.DigiDoc.util.ContainerNameUtils.java

public static boolean hasExtension(String containerName, String extension) {
    return FilenameUtils.getExtension(containerName).equals(extension);
}

From source file:com.gas.common.ui.util.ExecutableFileFilter.java

@Override
public boolean accept(File f) {
    boolean canExe = f.canExecute();
    if (Utilities.isWindows()) {
        String ext = FilenameUtils.getExtension(f.getAbsolutePath());
        return canExe && "exe".equalsIgnoreCase(ext);
    } else if (Utilities.isMac()) {
        return canExe;
    }//  ww  w  .  ja v  a2  s . c o m

    return canExe;
}

From source file:com.lovejoy777sarootool.rootool.dialogs.UnpackDialog.java

public static DialogFragment instantiate(File file1) {
    file = file1;
    ext = FilenameUtils.getExtension(file1.getName());
    return new UnpackDialog();
}

From source file:com.splunk.shuttl.archiver.util.UtilsBucket.java

private static File getTheCsvFileFromBucket(Bucket csvBucket) {
    for (File file : csvBucket.getDirectory().listFiles())
        if (FilenameUtils.getExtension(file.getName()).equals("csv"))
            return file;
    throw new NoCsvFileFoundException();
}

From source file:com.compomics.pride_asa_pipeline.core.logic.spectrum.SpectrumParserFactory.java

public static JMzReader getJMzReader(File inputFile)
        throws ClassNotFoundException, MzXMLParsingException, JMzReaderException {
    currentInputFile = inputFile;/*from www .  j  a  v a2s.c  om*/
    JMzReader parser = null;
    String extension = FilenameUtils.getExtension(inputFile.getAbsolutePath());
    switch (extension.toLowerCase()) {
    case "mzxml":
        LOGGER.info("Detected mzXml file extension.");
        currentType = FileParserType.MZXML;
        parser = new MzXMLFile(inputFile);
        break;
    case "mzml":
        LOGGER.info("Detected mzml file extension.");
        currentType = FileParserType.MZML;
        parser = new MzMlWrapper(inputFile);
        break;
    case "dta":
        LOGGER.info("Detected dta file extension.");
        currentType = FileParserType.DTA;
        parser = new DtaFile(inputFile);
        break;
    case "mgf":
        LOGGER.info("Detected mgf file extension.");
        currentType = FileParserType.MGF;
        parser = new MgfFile(inputFile);
        break;
    case "ms2":
        LOGGER.info("Detected ms2 file extension.");
        currentType = FileParserType.MS2;
        parser = new Ms2File(inputFile);
        break;
    case "mzData":
        LOGGER.info("Detected mzData file extension.");
        currentType = FileParserType.MZDATA;
        parser = new MzDataFile(inputFile);
        break;
    case "xml":
        LOGGER.info("Detected xml file extension.");
        currentType = FileParserType.PRIDEXML;
        parser = new PRIDEXmlWrapper(inputFile);
        break;
    case "pkl":
        LOGGER.info("Detected pkl file extension.");
        currentType = FileParserType.PKL;
        parser = new PklFile(inputFile);
        break;
    default:
        throw new ClassNotFoundException("No suitable parser was found for the inputfile.");
    }
    return parser;
}