Example usage for org.apache.commons.io FilenameUtils getBaseName

List of usage examples for org.apache.commons.io FilenameUtils getBaseName

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Introduction

In this page you can find the example usage for org.apache.commons.io FilenameUtils getBaseName.

Prototype

public static String getBaseName(String filename)

Source Link

Document

Gets the base name, minus the full path and extension, from a full filename.

Usage

From source file:de.xirp.profile.ProfileGenerator.java

/**
 * Generates a BOT file with the given path from the given 
 * {@link de.xirp.profile.Robot robot} bean.
 * /*from   w  w  w  . j  a  v a 2 s . co m*/
 * @param robot
 *          The robot to generate the XML for. 
 * @param botFile
 *          The file to write the result to. Must be the full path.
 * 
 * @throws JAXBException if the given robot was null, or something 
 *                    went wrong generating the xml.
 * @throws FileNotFoundException if something went wrong generating the xml.
 */
public static void generateBOT(Robot robot, File botFile) throws FileNotFoundException, JAXBException {

    if (robot == null) {
        throw new JAXBException(I18n.getString("ProfileGenerator.exception.robotNull")); //$NON-NLS-1$
    }

    String fileName = FilenameUtils.getBaseName(botFile.getName());

    JAXBContext jc = JAXBContext.newInstance(Robot.class);
    Marshaller m = jc.createMarshaller();
    m.setProperty(Marshaller.JAXB_FORMATTED_OUTPUT, Boolean.TRUE);
    m.marshal(robot, new FileOutputStream(
            Constants.CONF_ROBOTS_DIR + File.separator + fileName + Constants.ROBOT_POSTFIX));
}

From source file:de.tudarmstadt.ukp.dkpro.core.testing.IOTestRunner.java

public static void testOneWay2(Class<? extends CollectionReader> aReader,
        Class<? extends AnalysisComponent> aWriter, String aExpectedFile, String aOutputFile, String aFile,
        Object... aExtraParams) throws Exception {
    String outputFolder = aReader.getSimpleName() + "-" + FilenameUtils.getBaseName(aFile);
    if (DkproTestContext.get() != null) {
        outputFolder = DkproTestContext.get().getTestOutputFolderName();
    }/*w ww  .  jav a 2 s.  com*/

    File reference = new File("src/test/resources/" + aExpectedFile);
    File input = new File("src/test/resources/" + aFile);
    File output = new File("target/test-output/" + outputFolder);

    List<Object> extraReaderParams = new ArrayList<>();
    extraReaderParams.add(ComponentParameters.PARAM_SOURCE_LOCATION);
    extraReaderParams.add(input);
    extraReaderParams.addAll(asList(aExtraParams));

    CollectionReaderDescription reader = createReaderDescription(aReader, extraReaderParams.toArray());

    List<Object> extraWriterParams = new ArrayList<>();
    if (!ArrayUtils.contains(aExtraParams, ComponentParameters.PARAM_TARGET_LOCATION)) {
        extraWriterParams.add(ComponentParameters.PARAM_TARGET_LOCATION);
        extraWriterParams.add(output);
    }
    extraWriterParams.add(ComponentParameters.PARAM_STRIP_EXTENSION);
    extraWriterParams.add(true);
    extraWriterParams.addAll(asList(aExtraParams));

    AnalysisEngineDescription writer = createEngineDescription(aWriter, extraWriterParams.toArray());

    runPipeline(reader, writer);

    String expected = FileUtils.readFileToString(reference, "UTF-8");
    String actual = FileUtils.readFileToString(new File(output, aOutputFile), "UTF-8");
    assertEquals(expected.trim(), actual.trim());
}

From source file:gov.nih.nci.caarray.plugins.illumina.BgxDesignHandler.java

/**
 * {@inheritDoc}/*from  ww w  . ja v  a  2  s.c  om*/
 */
@Override
public void load(ArrayDesign arrayDesign) {
    arrayDesign.setName(FilenameUtils.getBaseName(this.designFile.getName()));
    arrayDesign.setLsidForEntity(IlluminaCsvDesignHandler.LSID_AUTHORITY + ":"
            + IlluminaCsvDesignHandler.LSID_NAMESPACE + ":" + arrayDesign.getName());
    try {
        arrayDesign.setNumberOfFeatures(getNumberOfFeatures());
    } catch (final IOException e) {
        LOG.error(e);
        throw new IllegalStateException("Couldn't read file: ", e);
    }
}

From source file:jp.co.tis.gsp.tools.dba.mojo.LoadDataMojo.java

@Override
protected void executeMojoSpec() throws MojoExecutionException, MojoFailureException {
    List<File> files = CollectionsUtil
            .newArrayList(FileUtils.listFiles(dataDirectory, new String[] { "csv" }, true));
    DriverManagerUtil.registerDriver(driver);
    Connection conn = null;/* www  .  j  ava2 s  .c  o  m*/
    try {
        conn = DriverManager.getConnection(url, user, password);
        conn.setAutoCommit(false);
    } catch (SQLException e) {
        getLog().error(
                "DB?????????driver??url?????????????");
        throw new MojoExecutionException("", e);
    }

    // ????
    EntityDependencyParser parser = new EntityDependencyParser();
    Dialect dialect = DialectFactory.getDialect(url);
    parser.parse(conn, url, dialect.normalizeSchemaName(schema));
    final List<String> tableList = parser.getTableList();
    Collections.sort(files, new Comparator<File>() {
        @Override
        public int compare(File f1, File f2) {
            return getIndex(FilenameUtils.getBaseName(f1.getName()))
                    - getIndex(FilenameUtils.getBaseName(f2.getName()));
        }

        private int getIndex(String tableName) {
            for (int i = 0; i < tableList.size(); i++) {
                if (StringUtil.equalsIgnoreCase(tableName, tableList.get(i))) {
                    return i;
                }
            }
            return 0;
        }

    });
    try {
        for (File file : files) {
            CsvReader reader = null;
            String fileName = file.getName();
            FileInputStream in = FileInputStreamUtil.create(file);
            try {
                getLog().info("????:" + fileName);
                if (specifiedEncodingFiles != null && specifiedEncodingFiles.containsKey(fileName)) {
                    String encoding = (String) specifiedEncodingFiles.get(fileName);
                    reader = new CsvReader(in, Charset.forName(encoding));
                    getLog().info(" -- encoding:" + encoding);
                } else {
                    reader = new CsvReader(in, SJIS);
                }
                String tableName = StringUtils.upperCase(FilenameUtils.getBaseName(fileName));
                reader.readHeaders();
                String[] headers = reader.getHeaders();
                CsvInsertHandler insertHandler = new CsvInsertHandler(conn, dialect,
                        dialect.normalizeSchemaName(schema), tableName, headers);
                insertHandler.prepare();

                while (reader.readRecord()) {
                    String[] values = reader.getValues();

                    for (int i = 0; i < values.length; i++) {
                        insertHandler.setObject(i + 1, values[i]);
                    }
                    insertHandler.execute();
                }

                insertHandler.close();
            } catch (IOException e) {
                getLog().warn("??????:" + file, e);
            } catch (SQLException e) {
                getLog().warn("SQL??????:" + file, e);
            } finally {
                if (reader != null)
                    reader.close();
            }
        }
    } finally {
        ConnectionUtil.close(conn);
    }
}

From source file:com.textocat.textokit.morph.lemmatizer.util.NormalizedTextWriter.java

@Override
public void process(JCas cas) throws AnalysisEngineProcessException {
    // initialize
    String docFilename;/* www .j a v a 2 s. co m*/
    try {
        docFilename = DocumentUtils.getDocumentFilename(cas.getCas());
    } catch (URISyntaxException e) {
        throw new AnalysisEngineProcessException(e);
    }
    if (docFilename == null) {
        throw new IllegalStateException("Can't extract a document filename from CAS");
    }
    String outFilename = FilenameUtils.getBaseName(docFilename) + OUTPUT_FILENAME_SUFFIX
            + OUTPUT_FILENAME_EXTENSION;
    File outFile = new File(outputDir, outFilename);
    Map<Token, Word> token2WordIndex = MorphCasUtils.getToken2WordIndex(cas);
    @SuppressWarnings("unchecked")
    FSIterator<TokenBase> tbIter = (FSIterator) cas.getAnnotationIndex(TokenBase.typeIndexID).iterator();
    try (PrintWriter out = IoUtils.openPrintWriter(outFile)) {
        Token lastProcessedTok = null;
        for (Token curTok : JCasUtil.select(cas, Token.class)) {
            // normalize space between
            out.print(normalizeSpaceBetween(tbIter, lastProcessedTok, curTok));
            // normalize current token
            String curTokNorm;
            Word w = token2WordIndex.get(curTok);
            if (w != null) {
                curTokNorm = MorphCasUtils.getFirstLemma(w);
            } else {
                curTokNorm = curTok.getCoveredText();
            }
            out.print(curTokNorm);
            //
            lastProcessedTok = curTok;
        }
        // handle a possible line ending after the last token
        out.print(normalizeSpaceBetween(tbIter, lastProcessedTok, null));
    } catch (IOException e) {
        throw new AnalysisEngineProcessException(e);
    }
}

From source file:com.mbrlabs.mundus.assets.FbxConv.java

public FbxConvResult execute() {
    FbxConvResult result = new FbxConvResult();
    if (input == null || output == null) {
        result.setSuccess(false);//from   w  w  w .  j  ava2 s  .  c o m
        result.setResultCode(FbxConvResult.RESULT_CODE_PARAM_ERROR);
        Log.error(TAG, "FbxCov input or output not defined");
        return result;
    }

    if (!input.endsWith("fbx")) {
        result.setSuccess(false);
        result.setResultCode(FbxConvResult.RESULT_CODE_WRONG_INPUT_FORMAT);
        Log.error(TAG, "FbxCov input format not supported");
    }

    // build arguments
    String outputFilename = FilenameUtils.getBaseName(input);
    List<String> args = new ArrayList<String>(6);
    if (flipTexture)
        args.add("-f");
    if (verbose)
        args.add("-v");
    if (outputFormat == OUTPUT_FORMAT_G3DJ) {
        args.add("-o");
        args.add("g3dj");
        outputFilename += ".g3dj";
    } else {
        outputFilename += ".g3db";
    }

    args.add(input);
    String path = FilenameUtils.concat(output, outputFilename);
    args.add(path);
    Log.debug("FbxConv", "Command: " + args);
    pb.command().addAll(args);

    // execute fbx-conv process
    try {
        Process process = pb.start();
        int exitCode = process.waitFor();
        String log = IOUtils.toString(process.getInputStream());

        if (exitCode == 0 && !log.contains("ERROR")) {
            result.setSuccess(true);
            result.setOutputFile(path);
        }
        result.setLog(log);

    } catch (IOException e) {
        e.printStackTrace();
        result.setSuccess(false);
        result.setResultCode(FbxConvResult.RESULT_CODE_IO_ERROR);
    } catch (InterruptedException e) {
        e.printStackTrace();
        result.setSuccess(false);
        result.setResultCode(FbxConvResult.RESULT_CODE_INTERRUPTED);
    }

    return result;
}

From source file:com.gmail.frogocomics.schematic.BiomeWorldV2Object.java

public static BiomeWorldV2Object load(File file) throws IOException {

    BufferedReader settingsReader;

    if (!file.exists()) {
        throw new FileNotFoundException();
    }//w w w. j  a v  a  2 s.  c o m
    settingsReader = new BufferedReader(new FileReader(file));
    int lineNumber = 0;
    String thisLine;
    ArrayList<BiomeWorldObjectBlock> bo2Blocks = new ArrayList<>();

    while ((thisLine = settingsReader.readLine()) != null) {
        lineNumber++;
        if (Pattern.compile("[0-9]").matcher(thisLine.substring(0, 1)).matches()
                || thisLine.substring(0, 1).equalsIgnoreCase("-")) {
            //Example: -1,-1,5:18.4
            // x,z,y:id.data
            String[] location = thisLine.split(":")[0].split(",");
            String[] block = thisLine.split(":")[1].split("\\.");
            bo2Blocks.add(new BiomeWorldObjectBlock(Integer.parseInt(location[0]),
                    Integer.parseInt(location[2]), Integer.parseInt(location[1]), Short.parseShort(block[0]),
                    Byte.parseByte(block[1])));
        }
    }

    ArrayList<Integer> maxXMap = new ArrayList<>();
    ArrayList<Integer> maxYMap = new ArrayList<>();
    ArrayList<Integer> maxZMap = new ArrayList<>();
    for (BiomeWorldObjectBlock bo2 : bo2Blocks) {
        maxXMap.add(bo2.getX());
        maxYMap.add(bo2.getY());
        maxZMap.add(bo2.getZ());
    }

    int maxX = Collections.max(maxXMap);
    int maxY = Collections.max(maxYMap);
    int maxZ = Collections.max(maxZMap);
    int minX = Collections.min(maxXMap);
    int minY = Collections.min(maxYMap);
    int minZ = Collections.min(maxZMap);
    int differenceX = maxX - minX + 1;
    int differenceY = maxY - minY + 1;
    int differenceZ = maxZ - minZ + 1;

    HashMap<Integer, Set<BiomeWorldObjectBlock>> blocks = new HashMap<>();
    for (int i = 0; i < differenceY + 1; i++) {
        blocks.put(i, new HashSet<>());
    }

    for (BiomeWorldObjectBlock bo2 : bo2Blocks) {
        Set<BiomeWorldObjectBlock> a = blocks.get(bo2.getY() - minY);
        a.add(bo2);
        blocks.replace(bo2.getY(), a);
    }

    //System.out.println(differenceX + " " + differenceZ);
    SliceStack schematic = new SliceStack(differenceY, differenceX, differenceZ);

    for (Map.Entry<Integer, Set<BiomeWorldObjectBlock>> next : blocks.entrySet()) {
        Slice slice = new Slice(differenceX, differenceZ);
        for (BiomeWorldObjectBlock block : next.getValue()) {
            //System.out.println("Added block at " + String.valueOf(block.getX() - minX) + "," + String.valueOf(block.getZ() - minZ));
            slice.setBlock(block.getBlock(), block.getX() - minX, block.getZ() - minZ);
        }
        schematic.addSlice(slice);
    }
    //System.out.println(schematic.toString());

    return new BiomeWorldV2Object(schematic, FilenameUtils.getBaseName(file.getAbsolutePath()));
}

From source file:io.gravitee.gateway.registry.mongodb.AbstractMongoDBTest.java

@Before
public void setup() throws Exception {
    mockStatic(PropertiesUtils.class);

    factory = MongodForTestsFactory.with(Version.Main.DEVELOPMENT);
    mongoClient = factory.newMongo();/*w w  w. j  a v a2s.com*/
    LOG.info("Creating database '{}'...", DATABASE_NAME);
    mongoDatabase = mongoClient.getDatabase(DATABASE_NAME);

    final ServerAddress mongoAddress = mongoClient.getAddress();
    when(PropertiesUtils.getProperty(any(Properties.class), eq("gravitee.io.mongodb.host")))
            .thenReturn(mongoAddress.getHost());
    when(PropertiesUtils.getProperty(any(Properties.class), eq("gravitee.io.mongodb.database")))
            .thenReturn(mongoDatabase.getName());
    when(PropertiesUtils.getPropertyAsInteger(any(Properties.class), eq("gravitee.io.mongodb.port")))
            .thenReturn(mongoAddress.getPort());

    final File file = new File(AbstractMongoDBTest.class.getResource(getJsonDataSetResourceName()).toURI());

    final String collectionName = FilenameUtils.getBaseName(file.getName());
    LOG.info("Creating collection '{}'...", collectionName);
    final MongoCollection<Document> collection = mongoDatabase.getCollection(collectionName);
    final List<DBObject> dbObjects = (List<DBObject>) JSON.parse(FileUtils.readFileToString(file));
    for (final DBObject dbObject : dbObjects) {
        final Document document = new Document();
        for (final String key : dbObject.keySet()) {
            document.put(key, dbObject.get(key));
        }
        collection.insertOne(document);
    }
}

From source file:gov.nih.nci.caarray.platforms.unparsed.UnparsedArrayDesignFileHandler.java

/**
 * {@inheritDoc}/*from  ww w  . j av  a 2 s.  c om*/
 */
@Override
public boolean openFiles(Set<CaArrayFile> designFiles) {
    if (designFiles == null || designFiles.size() != 1
            || !LSID_TEMPLATE_MAP.containsKey(designFiles.iterator().next().getFileType())) {
        return false;
    }

    this.designFile = designFiles.iterator().next();
    final LSID lsidTemplate = LSID_TEMPLATE_MAP.get(this.designFile.getFileType());
    this.designLsid = new LSID(lsidTemplate.getAuthority(), lsidTemplate.getNamespace(),
            FilenameUtils.getBaseName(this.designFile.getName()));
    return true;
}

From source file:com.nuvolect.deepdive.util.OmniUtil.java

/**
 * Return a unique file given the current file as a model.
 * Example if file exists: /Picture/mypic.jpg > /Picture/mypic~.jpg
 * @return/*from   w w  w.j a  va  2 s. c  o  m*/
 */
public static OmniFile makeUniqueName(OmniFile initialFile) {

    String path = initialFile.getPath();
    String basePath = FilenameUtils.getFullPath(path); // path without name
    String baseName = FilenameUtils.getBaseName(path); // name without extension
    String extension = FilenameUtils.getExtension(path); // extension
    String volumeId = initialFile.getVolumeId();
    String dot = ".";
    if (extension.isEmpty())
        dot = "";
    OmniFile file = initialFile;

    while (file.exists()) {

        baseName += "~";
        String fullPath = basePath + baseName + dot + extension;
        file = new OmniFile(volumeId, fullPath);
    }
    return file;
}