Example usage for javax.swing BoxLayout Y_AXIS

List of usage examples for javax.swing BoxLayout Y_AXIS

Introduction

In this page you can find the example usage for javax.swing BoxLayout Y_AXIS.

Prototype

int Y_AXIS

To view the source code for javax.swing BoxLayout Y_AXIS.

Click Source Link

Document

Specifies that components should be laid out top to bottom.

Usage

From source file:SuitaDetails.java

public PropPanel() {
    jPanel1 = new JPanel();
    addpanel = new JPanel();
    addpanel.setMaximumSize(new Dimension(32767, 25));
    addpanel.setMinimumSize(new Dimension(0, 25));
    addpanel.setPreferredSize(new Dimension(50, 25));
    addpanel.setLayout(new BorderLayout());
    JButton add = new JButton("Add");
    add.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent ev) {
            ArrayList<Integer> indexpos3 = (ArrayList<Integer>) parent.getPos().clone();
            indexpos3.add(new Integer(parent.getSubItemsNr()));
            Item property = new Item("", 0, -1, -1, 10, 20, indexpos3);
            property.setSubItemVisible(false);
            property.setValue("");
            parent.addSubItem(property);
            Prop prop = new Prop(parent, property);
            jPanel1.remove(addpanel);//  www . jav  a2s . co  m
            jPanel1.add(prop);
            jPanel1.add(addpanel);
            jPanel1.revalidate();
            jPanel1.repaint();
        }
    });
    addpanel.add(add, BorderLayout.EAST);
    addpanel.setBackground(Color.WHITE);
    JScrollPane jScrollPane1 = new JScrollPane(jPanel1);
    jPanel1.setBackground(Color.WHITE);
    jScrollPane1.setBackground(Color.WHITE);
    jScrollPane1.setBorder(null);
    jPanel1.setLayout(new BoxLayout(jPanel1, BoxLayout.Y_AXIS));
    setBorder(BorderFactory.createTitledBorder(BorderFactory.createLineBorder(new Color(153, 153, 153)),
            "Properties", TitledBorder.DEFAULT_JUSTIFICATION, TitledBorder.DEFAULT_POSITION, null,
            new Color(0, 0, 0)));
    setBackground(Color.WHITE);
    GroupLayout propLayout = new GroupLayout(this);
    setLayout(propLayout);
    propLayout.setHorizontalGroup(
            propLayout.createParallelGroup(GroupLayout.Alignment.LEADING).addComponent(jScrollPane1));
    propLayout.setVerticalGroup(
            propLayout.createParallelGroup(GroupLayout.Alignment.LEADING).addComponent(jScrollPane1));
}

From source file:com.xilinx.virtex7.MainScreen.java

private JPanel testAndStatsSecondTab() {
    JPanel tstats = new JPanel();
    tstats.setLayout(new BoxLayout(tstats, BoxLayout.Y_AXIS));

    JPanel tstats1 = new JPanel();
    tstats1.setLayout(new BoxLayout(tstats1, BoxLayout.Y_AXIS));

    tstats1.setBorder(BorderFactory.createCompoundBorder(BorderFactory.createTitledBorder(""),
            BorderFactory.createRaisedBevelBorder()));

    tstats1.add(testPanelItems2());// need to change testPanelItems method.

    JPanel dmaInner = new JPanel(new BorderLayout());

    JPanel dmaPanel = new JPanel(new BorderLayout());

    dmaPanel.setBackground(new Color(130, 170, 180));
    table1T2 = new MyTableModel(dummy_data, dmaColumnNames2);
    dmaStats1T2 = new JTable(table1T2);
    try {/*from ww w  . j  a  v a 2s.  com*/
        dmaStats1T2.setDefaultRenderer(Object.class, new CustomTableCellRenderer());
    } catch (Exception e) {
    }
    JTableHeader dmaHeader = dmaStats1T2.getTableHeader();
    dmaHeader.setForeground(new Color(92, 25, 25));

    dmaPanel.add(dmaHeader, BorderLayout.PAGE_START);
    dmaPanel.add(dmaStats1T2, BorderLayout.CENTER);
    dmaInner.add(dmaPanel, BorderLayout.CENTER);
    tstats1.add(dmaInner);
    tstats.add(tstats1);

    /*JPanel trnPanel = new JPanel(new GridLayout(1,1));
    trnPanel.setBorder(BorderFactory.createCompoundBorder(
                BorderFactory.createTitledBorder("PCIe Statistics"),
                BorderFactory.createRaisedBevelBorder()));
    JPanel trn1 = new JPanel(new FlowLayout());
    trn1.add(new JLabel("Transmit (writes in Gbps): "));
    trnLTXT2 = new JTextField("0.0", 5);
    trnLTXT2.setEditable(false);
    trn1.add(trnLTXT2);
    trn1.add(new JLabel("Receive (reads in Gbps): "));
    trnLRXT2 = new JTextField("0.0", 5);
    trnLRXT2.setEditable(false);
    trn1.add(trnLRXT2);
    trnPanel.add(trn1);
    tstats.add(trnPanel);*/

    JPanel tstats2 = new JPanel();
    tstats2.setLayout(new BoxLayout(tstats2, BoxLayout.Y_AXIS));
    tstats2.add(testPanelItems3());

    tstats2.setBorder(BorderFactory.createCompoundBorder(BorderFactory.createTitledBorder(""),
            BorderFactory.createRaisedBevelBorder()));

    JPanel dmaPanel1 = new JPanel(new BorderLayout());

    table2T2 = new MyTableModel(dummy_data, dmaColumnNames3);
    dmaStats2T2 = new JTable(table2T2);
    try {
        dmaStats2T2.setDefaultRenderer(Object.class, new CustomTableCellRenderer());
    } catch (Exception e) {
    }
    JTableHeader dmaHeader1 = dmaStats2T2.getTableHeader();
    dmaHeader1.setForeground(new Color(92, 25, 25));

    dmaPanel1.add(dmaHeader1, BorderLayout.PAGE_START);
    dmaPanel1.add(dmaStats2T2, BorderLayout.CENTER);
    tstats2.add(dmaPanel1);
    tstats.add(tstats2);
    return tstats;
}

From source file:edu.ucla.stat.SOCR.chart.Chart.java

protected void initGraphPanel() {
    //System.out.println("initGraphPanel called");
    graphPanel = new JPanel();

    graphPanel.setLayout(new BoxLayout(graphPanel, BoxLayout.Y_AXIS));

    JFreeChart chart = createEmptyChart(null); //create a empty graph first
    chartPanel = new ChartPanel(chart, false);
    chartPanel.setPreferredSize(new Dimension(CHART_SIZE_X, CHART_SIZE_Y));

    graphPanel.add(chartPanel);/*from w ww .  jav a 2 s  .co m*/
    graphPanel.validate();
}

From source file:edu.ucla.stat.SOCR.analyses.gui.NormalPower.java

protected void setSelectPanel() {
    selectPanel.removeAll();/*from   w w w. j a va 2  s  .c o m*/
    selectPanel.setPreferredSize(new Dimension(400, 400));
    selectPanel.add(subPanel, BorderLayout.EAST);
    selectPanel.add(subPanel, BorderLayout.CENTER);
    selectPanel.add(subPanel, BorderLayout.WEST);

    subPanel.add(parameterPanel, BorderLayout.SOUTH);
    subPanel.add(hypothesisPanel, BorderLayout.CENTER);
    subPanel.add(choicePanel, BorderLayout.NORTH);

    hypothesisPanel.setBackground(Color.LIGHT_GRAY);
    parameterPanel.setBackground(Color.LIGHT_GRAY);
    choicePanel.setBackground(Color.LIGHT_GRAY);
    /*********** Begin Check/Choice Setting ********************/
    //choicePanel.setLayout(new BoxLayout(choicePanel, BoxLayout.Y_AXIS));
    choicePanel.setLayout(new BorderLayout());
    choicePanel.add(checkSampleSizeBox, BorderLayout.NORTH);
    choicePanel.add(checkPowerBox, BorderLayout.CENTER);
    choicePanel.add(criticalValueBox, BorderLayout.SOUTH);

    /*********** End Check/Choice Setting ********************/

    /*********** Begin Hypothesis Setting ********************/

    h0Label = new JLabel("Null: mu      =       mu_0;  ");
    hALabelPrefix = new JLabel("Alternative: mu_A ");
    hALabelSurfix = new JLabel(" mu_0");

    h0Panel.setBackground(Color.LIGHT_GRAY);

    hAPanel.setBackground(Color.LIGHT_GRAY);
    hACheckBoxPanel.setBackground(Color.LIGHT_GRAY);

    hypothesisPanel.add(h0Panel, BorderLayout.CENTER);
    hypothesisPanel.add(hAPanel, BorderLayout.SOUTH);

    h0Panel.add(h0Label, BorderLayout.CENTER);

    hAPanel.add(hALabelPrefix, BorderLayout.WEST);
    hAPanel.add(hACheckBoxPanel, BorderLayout.CENTER);
    hAPanel.add(hALabelSurfix, BorderLayout.EAST);

    hACheckBoxPanel.add(checkNE, BorderLayout.CENTER);
    hACheckBoxPanel.add(checkLT, BorderLayout.EAST);
    hACheckBoxPanel.add(checkGT, BorderLayout.WEST);
    /*********** End Hypothesis Setting ********************/

    /*********** Begin Parameter Setting *******************/
    sampleSizePanel = new JPanel();
    sigmaPanel = new JPanel();
    mu0Panel = new JPanel();
    sigmaZTestPanel = new JPanel();
    mu0ZTestPanel = new JPanel();
    muAPanel = new JPanel();
    alphaPanel = new JPanel();
    powerPanel = new JPanel();
    xValuePanel = new JPanel();

    sampleSizePanel.add(sampleSizeLabel, BorderLayout.WEST);
    sampleSizePanel.add(sampleSizeBar, BorderLayout.CENTER);
    sampleSizePanel.add(sampleSizeText, BorderLayout.EAST);
    sigmaPanel.add(sigmaLabel, BorderLayout.WEST);
    sigmaPanel.add(sigmaText, BorderLayout.EAST);
    sigmaZTestPanel.add(sigmaZTestLabel, BorderLayout.WEST);
    sigmaZTestPanel.add(sigmaZTestText, BorderLayout.EAST);
    mu0Panel.add(mu0Label, BorderLayout.WEST);
    mu0Panel.add(mu0Text, BorderLayout.EAST);
    mu0ZTestPanel.add(mu0ZTestLabel, BorderLayout.WEST);
    mu0ZTestPanel.add(mu0ZTestText, BorderLayout.EAST);
    muAPanel.add(muALabel, BorderLayout.WEST);
    muAPanel.add(muAText, BorderLayout.EAST);
    alphaPanel.add(alphaLabel, BorderLayout.WEST);
    alphaPanel.add(alphaCombo, BorderLayout.EAST);
    powerPanel.add(powerLabel, BorderLayout.WEST);
    powerPanel.add(powerBar, BorderLayout.CENTER);
    powerPanel.add(powerText, BorderLayout.EAST);
    xValuePanel.add(xValueLabel, BorderLayout.WEST);
    xValuePanel.add(xValueText, BorderLayout.EAST);

    parameterPanel.setLayout(new BoxLayout(parameterPanel, BoxLayout.Y_AXIS));

    parameterPanel.add(sampleSizePanel);
    parameterPanel.add(powerPanel);

    parameterPanel.add(xValuePanel);
    parameterPanel.add(sigmaPanel);
    parameterPanel.add(mu0Panel);
    parameterPanel.add(muAPanel);
    parameterPanel.add(alphaPanel);

    parameterPanel.add(sigmaZTestPanel);
    parameterPanel.add(mu0ZTestPanel);

    parameterPanel.add(alphaPanel);
    parameterPanel.add(alphaPanel);

    hypothesisPanel.setVisible(true);
    sampleSizePanel.setVisible(true);
    powerPanel.setVisible(false);
    xValuePanel.setVisible(false);
    sigmaZTestPanel.setVisible(false);
    mu0ZTestPanel.setVisible(false);

}

From source file:userinterface.properties.GUIGraphHandler.java

public void defineConstantsAndPlot(Expression expr, JPanel graph, String seriesName, Boolean isNewGraph,
        boolean is2D) {

    JDialog dialog;/*from  www  .  j  ava  2 s .c o m*/
    JButton ok, cancel;
    JScrollPane scrollPane;
    ConstantPickerList constantList;
    JComboBox<String> xAxis, yAxis;

    //init everything
    dialog = new JDialog(GUIPrism.getGUI());
    dialog.setTitle("Define constants and select axes");
    dialog.setSize(500, 400);
    dialog.setLocationRelativeTo(GUIPrism.getGUI());
    dialog.setLayout(new BoxLayout(dialog.getContentPane(), BoxLayout.Y_AXIS));
    dialog.setModal(true);

    constantList = new ConstantPickerList();
    scrollPane = new JScrollPane(constantList);

    xAxis = new JComboBox<String>();
    yAxis = new JComboBox<String>();

    ok = new JButton("Ok");
    ok.setMnemonic('O');
    cancel = new JButton("Cancel");
    cancel.setMnemonic('C');

    //add all components to their dedicated panels
    JPanel exprPanel = new JPanel(new FlowLayout());
    exprPanel.setBorder(new TitledBorder("Function"));
    exprPanel.add(new JLabel(expr.toString()));

    JPanel axisPanel = new JPanel();
    axisPanel.setBorder(new TitledBorder("Select axis constants"));
    axisPanel.setLayout(new BoxLayout(axisPanel, BoxLayout.Y_AXIS));
    JPanel xAxisPanel = new JPanel(new FlowLayout());
    xAxisPanel.add(new JLabel("X axis:"));
    xAxisPanel.add(xAxis);
    JPanel yAxisPanel = new JPanel(new FlowLayout());
    yAxisPanel.add(new JLabel("Y axis:"));
    yAxisPanel.add(yAxis);
    axisPanel.add(xAxisPanel);
    axisPanel.add(yAxisPanel);

    JPanel constantPanel = new JPanel(new BorderLayout());
    constantPanel.setBorder(new TitledBorder("Please define the following constants"));
    constantPanel.add(scrollPane, BorderLayout.CENTER);
    constantPanel.add(new ConstantHeader(), BorderLayout.NORTH);

    JPanel bottomPanel = new JPanel(new FlowLayout(FlowLayout.RIGHT));
    bottomPanel.add(ok);
    bottomPanel.add(cancel);

    //fill the axes components

    for (int i = 0; i < expr.getAllConstants().size(); i++) {

        xAxis.addItem(expr.getAllConstants().get(i));

        if (!is2D)
            yAxis.addItem(expr.getAllConstants().get(i));
    }

    if (!is2D) {
        yAxis.setSelectedIndex(1);
    }

    //fill the constants table

    for (int i = 0; i < expr.getAllConstants().size(); i++) {

        ConstantLine line = new ConstantLine(expr.getAllConstants().get(i), TypeDouble.getInstance());
        constantList.addConstant(line);

        if (!is2D) {
            if (line.getName().equals(xAxis.getSelectedItem().toString())
                    || line.getName().equals(yAxis.getSelectedItem().toString())) {

                line.doFuncEnables(false);
            } else {
                line.doFuncEnables(true);
            }
        }

    }

    //do enables

    if (is2D) {
        yAxis.setEnabled(false);
    }

    ok.getInputMap(JComponent.WHEN_IN_FOCUSED_WINDOW).put(KeyStroke.getKeyStroke(KeyEvent.VK_ENTER, 0), "ok");
    ok.getActionMap().put("ok", new AbstractAction() {

        @Override
        public void actionPerformed(ActionEvent e) {
            ok.doClick();
        }
    });

    cancel.getInputMap(JComponent.WHEN_IN_FOCUSED_WINDOW).put(KeyStroke.getKeyStroke(KeyEvent.VK_ESCAPE, 0),
            "cancel");
    cancel.getActionMap().put("cancel", new AbstractAction() {

        @Override
        public void actionPerformed(ActionEvent e) {
            cancel.doClick();
        }
    });

    //add action listeners

    xAxis.addActionListener(new ActionListener() {

        @Override
        public void actionPerformed(ActionEvent e) {

            if (is2D) {
                return;
            }

            String item = xAxis.getSelectedItem().toString();

            if (item.equals(yAxis.getSelectedItem().toString())) {

                int index = yAxis.getSelectedIndex();

                if (index != yAxis.getItemCount() - 1) {
                    yAxis.setSelectedIndex(++index);
                } else {
                    yAxis.setSelectedIndex(--index);
                }

            }

            for (int i = 0; i < constantList.getNumConstants(); i++) {

                ConstantLine line = constantList.getConstantLine(i);

                if (line.getName().equals(xAxis.getSelectedItem().toString())
                        || line.getName().equals(yAxis.getSelectedItem().toString())) {

                    line.doFuncEnables(false);
                } else {

                    line.doFuncEnables(true);
                }

            }
        }
    });

    yAxis.addActionListener(new ActionListener() {

        @Override
        public void actionPerformed(ActionEvent e) {

            String item = yAxis.getSelectedItem().toString();

            if (item.equals(xAxis.getSelectedItem().toString())) {

                int index = xAxis.getSelectedIndex();

                if (index != xAxis.getItemCount() - 1) {
                    xAxis.setSelectedIndex(++index);
                } else {
                    xAxis.setSelectedIndex(--index);
                }
            }

            for (int i = 0; i < constantList.getNumConstants(); i++) {

                ConstantLine line = constantList.getConstantLine(i);

                if (line.getName().equals(xAxis.getSelectedItem().toString())
                        || line.getName().equals(yAxis.getSelectedItem().toString())) {

                    line.doFuncEnables(false);
                } else {

                    line.doFuncEnables(true);
                }

            }
        }
    });

    ok.addActionListener(new ActionListener() {

        @Override
        public void actionPerformed(ActionEvent e) {

            try {

                constantList.checkValid();

            } catch (PrismException e2) {
                JOptionPane.showMessageDialog(dialog,
                        "<html> One or more of the defined constants are invalid. <br><br> <font color=red>Error: </font>"
                                + e2.getMessage() + "</html>",
                        "Parse Error", JOptionPane.ERROR_MESSAGE);
                return;
            }

            if (is2D) {

                // it will always be a parametric graph in 2d case
                ParametricGraph pGraph = (ParametricGraph) graph;

                ConstantLine xAxisConstant = constantList.getConstantLine(xAxis.getSelectedItem().toString());

                if (xAxisConstant == null) {
                    //should never happen
                    JOptionPane.showMessageDialog(dialog, "The selected axis is invalid.", "Error",
                            JOptionPane.ERROR_MESSAGE);
                    return;
                }

                double xStartValue = Double.parseDouble(xAxisConstant.getStartValue());
                double xEndValue = Double.parseDouble(xAxisConstant.getEndValue());
                double xStepValue = Double.parseDouble(xAxisConstant.getStepValue());

                int seriesCount = 0;

                for (int i = 0; i < constantList.getNumConstants(); i++) {

                    ConstantLine line = constantList.getConstantLine(i);

                    if (line.getName().equals(xAxis.getSelectedItem().toString())) {
                        seriesCount++;
                    } else {

                        seriesCount += line.getTotalNumOfValues();

                    }
                }

                // if there will be too many series to be plotted, ask the user if they are sure they know what they are doing
                if (seriesCount > 10) {

                    int res = JOptionPane.showConfirmDialog(dialog,
                            "This configuration will create " + seriesCount + " series. Continue?", "Confirm",
                            JOptionPane.YES_NO_OPTION);

                    if (res == JOptionPane.NO_OPTION) {
                        return;
                    }

                }

                Values singleValuesGlobal = new Values();

                //add the single values to a global values list

                for (int i = 0; i < constantList.getNumConstants(); i++) {

                    ConstantLine line = constantList.getConstantLine(i);

                    if (line.getTotalNumOfValues() == 1) {

                        double singleValue = Double.parseDouble(line.getSingleValue());
                        singleValuesGlobal.addValue(line.getName(), singleValue);
                    }
                }

                // we just have one variable so we can plot directly
                if (constantList.getNumConstants() == 1
                        || singleValuesGlobal.getNumValues() == constantList.getNumConstants() - 1) {

                    SeriesKey key = pGraph.addSeries(seriesName);

                    pGraph.hideShape(key);
                    pGraph.getXAxisSettings().setHeading(xAxis.getSelectedItem().toString());
                    pGraph.getYAxisSettings().setHeading("function");

                    for (double x = xStartValue; x <= xEndValue; x += xStepValue) {

                        double ans = -1;

                        Values vals = new Values();
                        vals.addValue(xAxis.getSelectedItem().toString(), x);

                        for (int ii = 0; ii < singleValuesGlobal.getNumValues(); ii++) {

                            try {
                                vals.addValue(singleValuesGlobal.getName(ii),
                                        singleValuesGlobal.getDoubleValue(ii));
                            } catch (PrismLangException e1) {
                                e1.printStackTrace();
                            }

                        }

                        try {
                            ans = expr.evaluateDouble(vals);
                        } catch (PrismLangException e1) {
                            e1.printStackTrace();
                        }

                        pGraph.addPointToSeries(key, new PrismXYDataItem(x, ans));

                    }

                    if (isNewGraph) {
                        addGraph(pGraph);
                    }

                    dialog.dispose();
                    return;
                }

                for (int i = 0; i < constantList.getNumConstants(); i++) {

                    ConstantLine line = constantList.getConstantLine(i);

                    if (line == xAxisConstant || singleValuesGlobal.contains(line.getName())) {
                        continue;
                    }

                    double lineStart = Double.parseDouble(line.getStartValue());
                    double lineEnd = Double.parseDouble(line.getEndValue());
                    double lineStep = Double.parseDouble(line.getStepValue());

                    for (double j = lineStart; j < lineEnd; j += lineStep) {

                        SeriesKey key = pGraph.addSeries(seriesName);
                        pGraph.hideShape(key);

                        for (double x = xStartValue; x <= xEndValue; x += xStepValue) {

                            double ans = -1;

                            Values vals = new Values();
                            vals.addValue(xAxis.getSelectedItem().toString(), x);
                            vals.addValue(line.getName(), j);

                            for (int ii = 0; ii < singleValuesGlobal.getNumValues(); ii++) {

                                try {
                                    vals.addValue(singleValuesGlobal.getName(ii),
                                            singleValuesGlobal.getDoubleValue(ii));
                                } catch (PrismLangException e1) {
                                    // TODO Auto-generated catch block
                                    e1.printStackTrace();
                                }

                            }

                            for (int ii = 0; ii < constantList.getNumConstants(); ii++) {

                                if (constantList.getConstantLine(ii) == xAxisConstant
                                        || singleValuesGlobal
                                                .contains(constantList.getConstantLine(ii).getName())
                                        || constantList.getConstantLine(ii) == line) {

                                    continue;
                                }

                                ConstantLine temp = constantList.getConstantLine(ii);
                                double val = Double.parseDouble(temp.getStartValue());

                                vals.addValue(temp.getName(), val);
                            }

                            try {
                                ans = expr.evaluateDouble(vals);
                            } catch (PrismLangException e1) {
                                e1.printStackTrace();
                            }

                            pGraph.addPointToSeries(key, new PrismXYDataItem(x, ans));
                        }
                    }

                }

                if (isNewGraph) {
                    addGraph(graph);
                }
            } else {

                // this will always be a parametric graph for the 3d case
                ParametricGraph3D pGraph = (ParametricGraph3D) graph;

                //add the graph to the gui
                addGraph(pGraph);

                //Get the constants we want to put on the x and y axis
                ConstantLine xAxisConstant = constantList.getConstantLine(xAxis.getSelectedItem().toString());
                ConstantLine yAxisConstant = constantList.getConstantLine(yAxis.getSelectedItem().toString());

                //add the single values to a global values list

                Values singleValuesGlobal = new Values();

                for (int i = 0; i < constantList.getNumConstants(); i++) {

                    ConstantLine line = constantList.getConstantLine(i);

                    if (line.getTotalNumOfValues() == 1) {

                        double singleValue = Double.parseDouble(line.getSingleValue());
                        singleValuesGlobal.addValue(line.getName(), singleValue);
                    }
                }

                pGraph.setGlobalValues(singleValuesGlobal);
                pGraph.setAxisConstants(xAxis.getSelectedItem().toString(), yAxis.getSelectedItem().toString());
                pGraph.setBounds(xAxisConstant.getStartValue(), xAxisConstant.getEndValue(),
                        yAxisConstant.getStartValue(), yAxisConstant.getEndValue());

                SwingUtilities.invokeLater(new Runnable() {

                    @Override
                    public void run() {
                        //plot the graph
                        pGraph.plot(expr.toString(), xAxis.getSelectedItem().toString(), "Function",
                                yAxis.getSelectedItem().toString());

                        //calculate the sampling rates from the step sizes as given by the user

                        int xSamples = (int) ((Double.parseDouble(xAxisConstant.getEndValue())
                                - Double.parseDouble(xAxisConstant.getStartValue()))
                                / Double.parseDouble(xAxisConstant.getStepValue()));
                        int ySamples = (int) ((Double.parseDouble(xAxisConstant.getEndValue())
                                - Double.parseDouble(xAxisConstant.getStartValue()))
                                / Double.parseDouble(xAxisConstant.getStepValue()));

                        pGraph.setSamplingRates(xSamples, ySamples);
                    }
                });

            }

            dialog.dispose();
        }
    });

    cancel.addActionListener(new ActionListener() {

        @Override
        public void actionPerformed(ActionEvent e) {
            dialog.dispose();
        }
    });

    //add everything to the dialog show the dialog

    dialog.add(exprPanel);
    dialog.add(axisPanel);
    dialog.add(constantPanel);
    dialog.add(bottomPanel);
    dialog.setVisible(true);

}

From source file:com.xilinx.virtex7.MainScreen.java

private JPanel plotPanel() {
    JPanel panel = new JPanel();
    panel.setLayout(new BoxLayout(panel, BoxLayout.Y_AXIS));
    JPanel panel1 = new JPanel();
    JPanel panel2 = new JPanel();
    String[] labels0 = { "S2C0  ", "S2C1  ", "S2C2  ", "S2C3  ", "PCIe Reads  " };
    String[] labels1 = { "C2S0  ", "C2S1  ", "C2S2  ", "C2S3  ", "PCIe Writes  " };

    dma0chart = new DMABarChart("Transmit (S2C) Performance", panel1.getBackground(), labels0);
    dma1chart = new DMABarChart("Receive (C2S) Performance", panel1.getBackground(), labels1);
    panel1.setLayout(new BoxLayout(panel1, BoxLayout.Y_AXIS));
    panel1.setSize(new Dimension(panel1.getWidth() - 100, panel1.getHeight() - 100));

    panel1.add(dma0chart.getChart(""));
    panel2.setLayout(new BoxLayout(panel2, BoxLayout.Y_AXIS));
    panel2.setSize(new Dimension(panel2.getWidth() - 100, panel2.getHeight() - 100));

    panel2.add(dma1chart.getChart(""));
    panel.add(panel1);//from  w  ww  .  j av a 2s  .  co m
    panel.add(panel2);
    return panel;
}

From source file:com.xilinx.virtex7.MainScreen.java

private JPanel pciInfo() {
    JPanel pciSystemPanel = new JPanel();
    pciSystemPanel.setLayout(new BoxLayout(pciSystemPanel, BoxLayout.Y_AXIS));
    //pciSystemPanel.setLayout(new GridLayout(2, 1));

    JPanel topPanel = new JPanel(new GridLayout(1, 2));
    topPanel.setBorder(BorderFactory.createCompoundBorder(BorderFactory.createTitledBorder("PCIe Settings"),
            BorderFactory.createRaisedBevelBorder()));
    /*JPanel sPanel = new JPanel(new FlowLayout());
    sPanel.add(new JLabel("Link Speed: "));
    Object[] speeds = {"2.5 Gbps","5.0 Gbps"};
    final PartialDisableComboBox lspeed = new PartialDisableComboBox();
    lspeed.addItems(speeds);//  ww w . jav  a 2  s.c o  m
            
    // hack for safe exit
    if (di.getPCIInfo().LinkSpeed != 0 && di.getPCIInfo().LinkSpeed-1 < speeds.length){
    lspeed.setSelectedIndex(di.getPCIInfo().LinkSpeed-1);
    lspeed.setItemEnabled(di.getPCIInfo().LinkSpeed-1, false);
    }else{
    if (di.getPCIInfo().LinkSpeed == 4){
        System.out.println(di.getPCIInfo().LinkSpeed-2);
       // lspeed.setSelectedIndex(di.getPCIInfo().LinkSpeed-2);
       // lspeed.setItemEnabled(di.getPCIInfo().LinkSpeed-2, false);
    }else
        updateLog("Invalid Link Speed", keyWord);
    }
    sPanel.add(lspeed);
    JButton setSpeed = new JButton("Go");
    setSpeed.setToolTipText("This enables directed PCIe link speed change");
    setSpeed.addActionListener(new ActionListener() {
            
    @Override
    public void actionPerformed(ActionEvent ae) {
        if (lspeed.isItemEnabled(lspeed.getSelectedIndex()))
        {
            int ret = 0;
            if (lspeed.getSelectedIndex() == 2)
               ret = di.setLinkSpeed(lspeed.getSelectedIndex()+2);
            else
               ret = di.setLinkSpeed(lspeed.getSelectedIndex()+1); 
            if (ret == 0){
                //update pcie information
                di.get_PCIstate();
                lspeed.setItemEnabled(0, true);
                lspeed.setItemEnabled(1, true);
                lspeed.setSelectedIndex(di.getPCIInfo().LinkSpeed-1);
                lspeed.setItemEnabled(di.getPCIInfo().LinkSpeed-1, false);
                ptable.setData(di.getPCIInfo().getPCIData(), pcieColumnNames);
                ptable.fireTableDataChanged();
            }
            else{
                updateLog("Unable to set Link Speed "+lspeed.getSelectedItem(), keyWord);
            }
        }
    }
    });
            
    sPanel.add(setSpeed);
    // topPanel.add(sPanel);
            
    JPanel sPanel1 = new JPanel(new FlowLayout());
    sPanel1.add(new JLabel("Link Width: "));
    Object[] widths = {"x1","x2","x4","x8"};
    final PartialDisableComboBox lwidths = new PartialDisableComboBox();
    lwidths.addItems(widths);
    lwidths.setSelectedItem("x"+di.getPCIInfo().LinkWidth);
    lwidths.setItemEnabled(lwidths.getSelectedIndex(), false);
    sPanel1.add(lwidths);
    JButton setWidth = new JButton("Go");
    setWidth.setToolTipText("This enables directed PCIe link width change");
    setWidth.addActionListener(new ActionListener() {
            
    @Override
    public void actionPerformed(ActionEvent ae) {
        if (lwidths.isItemEnabled(lwidths.getSelectedIndex()))
        {
            int ret = di.setLinkWidth(lwidths.getSelectedIndex()+1);
            if (ret == 0){
                //update pcie information
                // some times width change affect link speed so
                // enable the same in lspeedd also
                di.get_PCIstate();
                lwidths.setItemEnabled(0, true);
                lwidths.setItemEnabled(1, true);
                lwidths.setItemEnabled(2, true);
                lwidths.setItemEnabled(3, true);
                lwidths.setSelectedItem("x"+di.getPCIInfo().LinkWidth);
                lwidths.setItemEnabled(lwidths.getSelectedIndex(), false);
            
                // some times width change affect link speed so
                // enable the same in lspeed also
                lspeed.setItemEnabled(0, true);
                lspeed.setItemEnabled(1, true);
                lspeed.setSelectedIndex(di.getPCIInfo().LinkSpeed-1);
                lspeed.setItemEnabled(di.getPCIInfo().LinkSpeed-1, false);
            
                ptable.setData(di.getPCIInfo().getPCIData(), pcieColumnNames);
                ptable.fireTableDataChanged();
            
            }else
            {
                di.get_PCIstate();
                int upCap = di.getPCIInfo().LinkUpCap;
                                             
                if (upCap == 0)
                    updateLog("Unable to set Link Width "+lwidths.getSelectedItem()+". PCIe link not upconfigurable", keyWord);
            
                else
                    updateLog("Unable to set Link Width "+lwidths.getSelectedItem(), keyWord);
            
            }
        }
    }
    });
    sPanel1.add(setWidth);
    //  topPanel.add(sPanel1);
    */

    //  pciSystemPanel.add(topPanel);
    JPanel panel = new JPanel(new GridLayout(1, 2));

    JPanel pciPanel = new JPanel(new BorderLayout());
    pciPanel.setBorder(BorderFactory.createCompoundBorder(
            BorderFactory.createTitledBorder("PCIe Endpoint Status"), BorderFactory.createRaisedBevelBorder()));
    ptable = new MyTableModel(di.getPCIInfo().getPCIData(), pcieColumnNames);
    pcieTable = new JTable(ptable);
    try {
        pcieTable.setDefaultRenderer(Object.class, new CustomTableCellRenderer());
    } catch (Exception e) {
    }

    JTableHeader pcieHeader = pcieTable.getTableHeader();
    pcieHeader.setForeground(new Color(92, 25, 25));

    pciPanel.add(pcieHeader, BorderLayout.PAGE_START);
    pciPanel.add(pcieTable, BorderLayout.CENTER);

    panel.add(pciPanel);

    JPanel hostPanel = new JPanel(new BorderLayout());
    hostPanel.setBorder(BorderFactory.createCompoundBorder(
            BorderFactory.createTitledBorder("Host System's Initial Credits"),
            BorderFactory.createRaisedBevelBorder()));
    htable = new MyTableModel(di.getPCIInfo().getHostedData(), pcieColumnNames);
    hostTable = new JTable(htable);
    try {
        hostTable.setDefaultRenderer(Object.class, new CustomTableCellRenderer());
    } catch (Exception e) {
    }

    JTableHeader hostHeader = hostTable.getTableHeader();
    hostHeader.setForeground(new Color(92, 25, 25));

    hostPanel.add(hostHeader, BorderLayout.PAGE_START);
    hostPanel.add(hostTable, BorderLayout.CENTER);

    panel.add(hostPanel);

    pciSystemPanel.add(panel);

    pciSystemPanel.add(dialChart(pciSystemPanel.getWidth()));

    return pciSystemPanel;
}

From source file:Installer.java

public Installer(File targetDir) {
    ToolTipManager.sharedInstance().setDismissDelay(Integer.MAX_VALUE);
    this.setLayout(new BoxLayout(this, BoxLayout.Y_AXIS));

    JPanel logoSplash = new JPanel();
    logoSplash.setLayout(new BoxLayout(logoSplash, BoxLayout.Y_AXIS));
    try {//  w  w  w. ja va 2 s .  com
        // Read png
        BufferedImage image;
        image = ImageIO.read(Installer.class.getResourceAsStream("logo.png"));
        ImageIcon icon = new ImageIcon(image);
        JLabel logoLabel = new JLabel(icon);
        logoLabel.setAlignmentX(CENTER_ALIGNMENT);
        logoLabel.setAlignmentY(CENTER_ALIGNMENT);
        logoLabel.setSize(image.getWidth(), image.getHeight());
        if (!QUIET_DEV) // VIVE - hide oculus logo
            logoSplash.add(logoLabel);
    } catch (IOException e) {
    } catch (IllegalArgumentException e) {
    }

    userHomeDir = System.getProperty("user.home", ".");
    osType = System.getProperty("os.name").toLowerCase();
    if (osType.contains("win")) {
        isWindows = true;
        appDataDir = System.getenv("APPDATA");
    }

    version = "UNKNOWN";
    try {
        InputStream ver = Installer.class.getResourceAsStream("version");
        if (ver != null) {
            String[] tok = new BufferedReader(new InputStreamReader(ver)).readLine().split(":");
            if (tok.length > 0) {
                jar_id = tok[0];
                version = tok[1];
            }
        }
    } catch (IOException e) {
    }

    // Read release notes, save to file
    String tmpFileName = System.getProperty("java.io.tmpdir") + releaseNotePathAddition + "Vivecraft"
            + version.toLowerCase() + "_release_notes.txt";
    releaseNotes = new File(tmpFileName);
    InputStream is = Installer.class.getResourceAsStream("release_notes.txt");
    if (!copyInputStreamToFile(is, releaseNotes)) {
        releaseNotes = null;
    }

    JLabel tag = new JLabel("Welcome! This will install Vivecraft " + version);
    tag.setAlignmentX(CENTER_ALIGNMENT);
    tag.setAlignmentY(CENTER_ALIGNMENT);
    logoSplash.add(tag);

    logoSplash.add(Box.createRigidArea(new Dimension(5, 20)));
    tag = new JLabel("Select path to minecraft. (The default here is almost always what you want.)");
    tag.setAlignmentX(CENTER_ALIGNMENT);
    tag.setAlignmentY(CENTER_ALIGNMENT);
    logoSplash.add(tag);

    logoSplash.setAlignmentX(CENTER_ALIGNMENT);
    logoSplash.setAlignmentY(TOP_ALIGNMENT);
    this.add(logoSplash);

    JPanel entryPanel = new JPanel();
    entryPanel.setLayout(new BoxLayout(entryPanel, BoxLayout.X_AXIS));

    Installer.targetDir = targetDir;
    selectedDirText = new JTextField();
    selectedDirText.setEditable(false);
    selectedDirText.setToolTipText("Path to minecraft");
    selectedDirText.setColumns(30);
    entryPanel.add(selectedDirText);
    JButton dirSelect = new JButton();
    dirSelect.setAction(new FileSelectAction());
    dirSelect.setText("...");
    dirSelect.setToolTipText("Select an alternative minecraft directory");
    entryPanel.add(dirSelect);

    entryPanel.setAlignmentX(LEFT_ALIGNMENT);
    entryPanel.setAlignmentY(TOP_ALIGNMENT);
    infoLabel = new JLabel();
    infoLabel.setHorizontalTextPosition(JLabel.LEFT);
    infoLabel.setVerticalTextPosition(JLabel.TOP);
    infoLabel.setAlignmentX(LEFT_ALIGNMENT);
    infoLabel.setAlignmentY(TOP_ALIGNMENT);
    infoLabel.setVisible(false);

    fileEntryPanel = new JPanel();
    fileEntryPanel.setLayout(new BoxLayout(fileEntryPanel, BoxLayout.Y_AXIS));
    fileEntryPanel.add(infoLabel);
    fileEntryPanel.add(entryPanel);

    fileEntryPanel.setAlignmentX(CENTER_ALIGNMENT);
    fileEntryPanel.setAlignmentY(TOP_ALIGNMENT);
    this.add(fileEntryPanel);
    this.add(Box.createVerticalStrut(5));

    JPanel optPanel = new JPanel();
    optPanel.setLayout(new BoxLayout(optPanel, BoxLayout.Y_AXIS));
    optPanel.setAlignmentX(LEFT_ALIGNMENT);
    optPanel.setAlignmentY(TOP_ALIGNMENT);

    //Add forge options
    JPanel forgePanel = new JPanel();
    forgePanel.setLayout(new BoxLayout(forgePanel, BoxLayout.X_AXIS));
    //Create forge: no/yes buttons
    useForge = new JCheckBox();
    AbstractAction actf = new updateActionF();
    actf.putValue(AbstractAction.NAME, "Install Vivecraft with Forge " + FORGE_VERSION);
    useForge.setAction(actf);
    forgeVersion = new JComboBox();
    if (!ALLOW_FORGE_INSTALL)
        useForge.setEnabled(false);
    useForge.setToolTipText(
            "<html>" + "If checked, installs Vivecraft with Forge support. The correct version of Forge<br>"
                    + "(as displayed) must already be installed.<br>" + "</html>");

    //Add "yes" and "which version" to the forgePanel
    useForge.setAlignmentX(LEFT_ALIGNMENT);
    forgeVersion.setAlignmentX(LEFT_ALIGNMENT);
    forgePanel.add(useForge);
    //forgePanel.add(forgeVersion);

    // Profile creation / update support
    createProfile = new JCheckBox("", true);
    AbstractAction actp = new updateActionP();
    actp.putValue(AbstractAction.NAME, "Create Vivecraft launcher profile");
    createProfile.setAction(actp);
    createProfile.setAlignmentX(LEFT_ALIGNMENT);
    createProfile.setSelected(true);
    createProfile.setToolTipText("<html>"
            + "If checked, if a Vivecraft profile doesn't already exist within the Minecraft launcher<br>"
            + "one is added. Then the profile is selected, and this Vivecraft version is set as the<br>"
            + "current version.<br>" + "</html>");

    useShadersMod = new JCheckBox();
    useShadersMod.setAlignmentX(LEFT_ALIGNMENT);
    if (!ALLOW_SHADERSMOD_INSTALL)
        useShadersMod.setEnabled(false);
    AbstractAction acts = new updateActionSM();
    acts.putValue(AbstractAction.NAME, "Install Vivecraft with ShadersMod 2.3.29");
    useShadersMod.setAction(acts);
    useShadersMod.setToolTipText("<html>" + "If checked, sets the vivecraft profile to use ShadersMod <br>"
            + "support." + "</html>");

    useHydra = new JCheckBox("Razer Hydra support", false);
    useHydra.setAlignmentX(LEFT_ALIGNMENT);
    if (!ALLOW_HYDRA_INSTALL)
        useHydra.setEnabled(false);
    useHydra.setToolTipText("<html>"
            + "If checked, installs the additional Razor Hydra native library required for Razor Hydra<br>"
            + "support." + "</html>");

    useHrtf = new JCheckBox("Enable binaural audio (Only needed once per PC)", false);
    useHrtf.setToolTipText("<html>"
            + "If checked, the installer will create the configuration file needed for OpenAL HRTF<br>"
            + "ear-aware sound in Minecraft (and other games).<br>"
            + " If the file has previously been created, you do not need to check this again.<br>"
            + " NOTE: Your sound card's output MUST be set to 44.1Khz.<br>" + " WARNING, will overwrite "
            + (isWindows ? (appDataDir + "\\alsoft.ini") : (userHomeDir + "/.alsoftrc")) + "!<br>"
            + " Delete the " + (isWindows ? "alsoft.ini" : "alsoftrc") + " file to disable HRTF again."
            + "</html>");
    useHrtf.setAlignmentX(LEFT_ALIGNMENT);

    //Add option panels option panel
    forgePanel.setAlignmentX(LEFT_ALIGNMENT);

    //optPanel.add(forgePanel);
    //optPanel.add(useShadersMod);
    optPanel.add(createProfile);
    optPanel.add(useHrtf);
    this.add(optPanel);

    this.add(Box.createRigidArea(new Dimension(5, 20)));

    instructions = new JLabel("", SwingConstants.CENTER);
    instructions.setAlignmentX(CENTER_ALIGNMENT);
    instructions.setAlignmentY(TOP_ALIGNMENT);
    instructions.setForeground(Color.RED);
    instructions.setPreferredSize(new Dimension(20, 40));
    this.add(instructions);

    this.add(Box.createVerticalGlue());
    JLabel github = linkify("Vivecraft is open source. find it on Github",
            "https://github.com/jrbudda/Vivecraft_111", "Vivecraft 1.11 Github");
    JLabel wiki = linkify("Vivecraft home page", "http://www.vivecraft.org", "Vivecraft Home");
    JLabel donate = linkify("If you think Vivecraft is awesome, please consider donating.",
            "https://www.paypal.com/cgi-bin/webscr?cmd=_donations&business=JVBJLN5HJJS52&lc=US&item_name=jrbudda&currency_code=USD&bn=PP%2dDonationsBF%3abtn_donateCC_LG%2egif%3aNonHosted)",
            "jrbudda's Paypal");
    JLabel optifine = linkify("Vivecraft includes OptiFine for performance. Consider donating to them as well.",
            "http://optifine.net/donate.php", "http://optifine.net/donate.php");

    github.setAlignmentX(CENTER_ALIGNMENT);
    github.setHorizontalAlignment(SwingConstants.CENTER);
    wiki.setAlignmentX(CENTER_ALIGNMENT);
    wiki.setHorizontalAlignment(SwingConstants.CENTER);
    donate.setAlignmentX(CENTER_ALIGNMENT);
    donate.setHorizontalAlignment(SwingConstants.CENTER);
    optifine.setAlignmentX(CENTER_ALIGNMENT);
    optifine.setHorizontalAlignment(SwingConstants.CENTER);

    this.add(Box.createRigidArea(new Dimension(5, 20)));
    this.add(github);
    this.add(wiki);
    this.add(donate);
    this.add(optifine);

    this.setAlignmentX(LEFT_ALIGNMENT);
    updateFilePath();
    updateInstructions();
}

From source file:AppearanceExplorer.java

public ColoringAttributesEditor(ColoringAttributes init) {
    super(BoxLayout.Y_AXIS);
    coloringAttr = init;//from  w  ww  . j a v a 2s. c o  m
    coloringAttr.getColor(color);
    coloringShadeModel = coloringAttr.getShadeModel();

    String[] shadeNames = { "SHADE_FLAT", "SHADE_GOURAUD", "NICEST", "FASTEST" };
    int[] shadeValues = { ColoringAttributes.SHADE_FLAT, ColoringAttributes.SHADE_GOURAUD,
            ColoringAttributes.NICEST, ColoringAttributes.FASTEST };

    IntChooser shadeChooser = new IntChooser("Shade model:", shadeNames, shadeValues, coloringShadeModel);
    shadeChooser.addIntListener(new IntListener() {
        public void intChanged(IntEvent event) {
            int value = event.getValue();
            coloringAttr.setShadeModel(value);
        }
    });
    add(shadeChooser);

    Color3fEditor colorEditor = new Color3fEditor("Color", color);
    colorEditor.addColor3fListener(new Color3fListener() {
        public void colorChanged(Color3fEvent event) {
            event.getValue(color);
            coloringAttr.setColor(color);
        }
    });
    add(colorEditor);
}

From source file:ffx.ui.ModelingPanel.java

private void loadCommand() {
    synchronized (this) {
        // Force Field X Command
        Element command;//w  w w .  jav a  2  s  .  c  o  m
        // Command Options
        NodeList options;
        Element option;
        // Option Values
        NodeList values;
        Element value;
        // Options may be Conditional based on previous Option values (not
        // always supplied)
        NodeList conditionalList;
        Element conditional;
        // JobPanel GUI Components that change based on command
        JPanel optionPanel;
        // Clear the previous components
        commandPanel.removeAll();
        optionsTabbedPane.removeAll();
        conditionals.clear();
        String currentCommand = (String) currentCommandBox.getSelectedItem();
        if (currentCommand == null) {
            commandPanel.validate();
            commandPanel.repaint();
            return;
        }
        command = null;
        for (int i = 0; i < commandList.getLength(); i++) {
            command = (Element) commandList.item(i);
            String name = command.getAttribute("name");
            if (name.equalsIgnoreCase(currentCommand)) {
                break;
            }
        }
        int div = splitPane.getDividerLocation();
        descriptTextArea.setText(currentCommand.toUpperCase() + ": " + command.getAttribute("description"));
        splitPane.setBottomComponent(descriptScrollPane);
        splitPane.setDividerLocation(div);
        // The "action" tells Force Field X what to do when the
        // command finishes
        commandActions = command.getAttribute("action").trim();
        // The "fileType" specifies what file types this command can execute
        // on
        String string = command.getAttribute("fileType").trim();
        String[] types = string.split(" +");
        commandFileTypes.clear();
        for (String type : types) {
            if (type.contains("XYZ")) {
                commandFileTypes.add(FileType.XYZ);
            }
            if (type.contains("INT")) {
                commandFileTypes.add(FileType.INT);
            }
            if (type.contains("ARC")) {
                commandFileTypes.add(FileType.ARC);
            }
            if (type.contains("PDB")) {
                commandFileTypes.add(FileType.PDB);
            }
            if (type.contains("ANY")) {
                commandFileTypes.add(FileType.ANY);
            }
        }
        // Determine what options are available for this command
        options = command.getElementsByTagName("Option");
        int length = options.getLength();
        for (int i = 0; i < length; i++) {
            // This Option will be enabled (isEnabled = true) unless a
            // Conditional disables it
            boolean isEnabled = true;
            option = (Element) options.item(i);
            conditionalList = option.getElementsByTagName("Conditional");
            /*
             * Currently, there can only be 0 or 1 Conditionals per Option
             * There are three types of Conditionals implemented. 1.)
             * Conditional on a previous Option, this option may be
             * available 2.) Conditional on input for this option, a
             * sub-option may be available 3.) Conditional on the presence
             * of keywords, this option may be available
             */
            if (conditionalList != null) {
                conditional = (Element) conditionalList.item(0);
            } else {
                conditional = null;
            }
            // Get the command line flag
            String flag = option.getAttribute("flag").trim();
            // Get the description
            String optionDescript = option.getAttribute("description");
            JTextArea optionTextArea = new JTextArea("  " + optionDescript.trim());
            optionTextArea.setEditable(false);
            optionTextArea.setLineWrap(true);
            optionTextArea.setWrapStyleWord(true);
            optionTextArea.setBorder(etchedBorder);
            // Get the default for this Option (if one exists)
            String defaultOption = option.getAttribute("default");
            // Option Panel
            optionPanel = new JPanel(new BorderLayout());
            optionPanel.add(optionTextArea, BorderLayout.NORTH);
            String swing = option.getAttribute("gui");
            JPanel optionValuesPanel = new JPanel(new FlowLayout());
            optionValuesPanel.setBorder(etchedBorder);
            ButtonGroup bg = null;
            if (swing.equalsIgnoreCase("CHECKBOXES")) {
                // CHECKBOXES allows selection of 1 or more values from a
                // predefined set (Analyze, for example)
                values = option.getElementsByTagName("Value");
                for (int j = 0; j < values.getLength(); j++) {
                    value = (Element) values.item(j);
                    JCheckBox jcb = new JCheckBox(value.getAttribute("name"));
                    jcb.addMouseListener(this);
                    jcb.setName(flag);
                    if (defaultOption != null && jcb.getActionCommand().equalsIgnoreCase(defaultOption)) {
                        jcb.setSelected(true);
                    }
                    optionValuesPanel.add(jcb);
                }
            } else if (swing.equalsIgnoreCase("TEXTFIELD")) {
                // TEXTFIELD takes an arbitrary String as input
                JTextField jtf = new JTextField(20);
                jtf.addMouseListener(this);
                jtf.setName(flag);
                if (defaultOption != null && defaultOption.equals("ATOMS")) {
                    FFXSystem sys = mainPanel.getHierarchy().getActive();
                    if (sys != null) {
                        jtf.setText("" + sys.getAtomList().size());
                    }
                } else if (defaultOption != null) {
                    jtf.setText(defaultOption);
                }
                optionValuesPanel.add(jtf);
            } else if (swing.equalsIgnoreCase("RADIOBUTTONS")) {
                // RADIOBUTTONS allows one choice from a set of predifined
                // values
                bg = new ButtonGroup();
                values = option.getElementsByTagName("Value");
                for (int j = 0; j < values.getLength(); j++) {
                    value = (Element) values.item(j);
                    JRadioButton jrb = new JRadioButton(value.getAttribute("name"));
                    jrb.addMouseListener(this);
                    jrb.setName(flag);
                    bg.add(jrb);
                    if (defaultOption != null && jrb.getActionCommand().equalsIgnoreCase(defaultOption)) {
                        jrb.setSelected(true);
                    }
                    optionValuesPanel.add(jrb);
                }
            } else if (swing.equalsIgnoreCase("PROTEIN")) {
                // Protein allows selection of amino acids for the protein
                // builder
                optionValuesPanel.setLayout(new BoxLayout(optionValuesPanel, BoxLayout.Y_AXIS));
                optionValuesPanel.add(Box.createRigidArea(new Dimension(0, 5)));
                optionValuesPanel.add(getAminoAcidPanel());
                optionValuesPanel.add(Box.createRigidArea(new Dimension(0, 5)));
                acidComboBox.removeAllItems();
                JButton add = new JButton("Edit");
                add.setActionCommand("PROTEIN");
                add.addActionListener(this);
                add.setAlignmentX(Button.CENTER_ALIGNMENT);
                JPanel comboPanel = new JPanel(new FlowLayout(FlowLayout.CENTER));
                comboPanel.add(acidTextField);
                comboPanel.add(add);
                optionValuesPanel.add(comboPanel);
                optionValuesPanel.add(Box.createRigidArea(new Dimension(0, 5)));
                JButton remove = new JButton("Remove");
                add.setMinimumSize(remove.getPreferredSize());
                add.setPreferredSize(remove.getPreferredSize());
                remove.setActionCommand("PROTEIN");
                remove.addActionListener(this);
                remove.setAlignmentX(Button.CENTER_ALIGNMENT);
                comboPanel = new JPanel(new FlowLayout(FlowLayout.CENTER));
                comboPanel.add(acidComboBox);
                comboPanel.add(remove);
                optionValuesPanel.add(comboPanel);
                optionValuesPanel.add(Box.createRigidArea(new Dimension(0, 5)));
                optionValuesPanel.add(acidScrollPane);
                optionValuesPanel.add(Box.createRigidArea(new Dimension(0, 5)));
                JButton reset = new JButton("Reset");
                reset.setActionCommand("PROTEIN");
                reset.addActionListener(this);
                reset.setAlignmentX(Button.CENTER_ALIGNMENT);
                optionValuesPanel.add(reset);
                optionValuesPanel.add(Box.createRigidArea(new Dimension(0, 5)));
                acidTextArea.setText("");
                acidTextField.setText("");
            } else if (swing.equalsIgnoreCase("NUCLEIC")) {
                // Nucleic allows selection of nucleic acids for the nucleic
                // acid builder
                optionValuesPanel.setLayout(new BoxLayout(optionValuesPanel, BoxLayout.Y_AXIS));
                optionValuesPanel.add(Box.createRigidArea(new Dimension(0, 5)));
                optionValuesPanel.add(getNucleicAcidPanel());
                optionValuesPanel.add(Box.createRigidArea(new Dimension(0, 5)));
                acidComboBox.removeAllItems();
                JButton add = new JButton("Edit");
                add.setActionCommand("NUCLEIC");
                add.addActionListener(this);
                add.setAlignmentX(Button.CENTER_ALIGNMENT);
                JPanel comboPanel = new JPanel(new FlowLayout(FlowLayout.CENTER));
                comboPanel.add(acidTextField);
                comboPanel.add(add);
                optionValuesPanel.add(comboPanel);
                optionValuesPanel.add(Box.createRigidArea(new Dimension(0, 5)));
                JButton remove = new JButton("Remove");
                add.setMinimumSize(remove.getPreferredSize());
                add.setPreferredSize(remove.getPreferredSize());
                remove.setActionCommand("NUCLEIC");
                remove.addActionListener(this);
                remove.setAlignmentX(Button.CENTER_ALIGNMENT);
                comboPanel = new JPanel(new FlowLayout(FlowLayout.CENTER));
                comboPanel.add(acidComboBox);
                comboPanel.add(remove);
                optionValuesPanel.add(comboPanel);
                optionValuesPanel.add(Box.createRigidArea(new Dimension(0, 5)));
                optionValuesPanel.add(acidScrollPane);
                optionValuesPanel.add(Box.createRigidArea(new Dimension(0, 5)));
                JButton button = new JButton("Reset");
                button.setActionCommand("NUCLEIC");
                button.addActionListener(this);
                button.setAlignmentX(Button.CENTER_ALIGNMENT);
                optionValuesPanel.add(button);
                optionValuesPanel.add(Box.createRigidArea(new Dimension(0, 5)));
                acidTextArea.setText("");
                acidTextField.setText("");
            } else if (swing.equalsIgnoreCase("SYSTEMS")) {
                // SYSTEMS allows selection of an open system
                JComboBox<FFXSystem> jcb = new JComboBox<>(mainPanel.getHierarchy().getNonActiveSystems());
                jcb.setSize(jcb.getMaximumSize());
                jcb.addActionListener(this);
                optionValuesPanel.add(jcb);
            }
            // Set up a Conditional for this Option
            if (conditional != null) {
                isEnabled = false;
                String conditionalName = conditional.getAttribute("name");
                String conditionalValues = conditional.getAttribute("value");
                String cDescription = conditional.getAttribute("description");
                String cpostProcess = conditional.getAttribute("postProcess");
                if (conditionalName.toUpperCase().startsWith("KEYWORD")) {
                    optionPanel.setName(conditionalName);
                    String keywords[] = conditionalValues.split(" +");
                    if (activeSystem != null) {
                        Hashtable<String, Keyword> systemKeywords = activeSystem.getKeywords();
                        for (String key : keywords) {
                            if (systemKeywords.containsKey(key.toUpperCase())) {
                                isEnabled = true;
                            }
                        }
                    }
                } else if (conditionalName.toUpperCase().startsWith("VALUE")) {
                    isEnabled = true;
                    // Add listeners to the values of this option so
                    // the conditional options can be disabled/enabled.
                    for (int j = 0; j < optionValuesPanel.getComponentCount(); j++) {
                        JToggleButton jtb = (JToggleButton) optionValuesPanel.getComponent(j);
                        jtb.addActionListener(this);
                        jtb.setActionCommand("Conditional");
                    }
                    JPanel condpanel = new JPanel();
                    condpanel.setBorder(etchedBorder);
                    JLabel condlabel = new JLabel(cDescription);
                    condlabel.setEnabled(false);
                    condlabel.setName(conditionalValues);
                    JTextField condtext = new JTextField(10);
                    condlabel.setLabelFor(condtext);
                    if (cpostProcess != null) {
                        condtext.setName(cpostProcess);
                    }
                    condtext.setEnabled(false);
                    condpanel.add(condlabel);
                    condpanel.add(condtext);
                    conditionals.add(condlabel);
                    optionPanel.add(condpanel, BorderLayout.SOUTH);
                } else if (conditionalName.toUpperCase().startsWith("REFLECTION")) {
                    String[] condModifiers;
                    if (conditionalValues.equalsIgnoreCase("AltLoc")) {
                        condModifiers = activeSystem.getAltLocations();
                        if (condModifiers != null && condModifiers.length > 1) {
                            isEnabled = true;
                            bg = new ButtonGroup();
                            for (int j = 0; j < condModifiers.length; j++) {
                                JRadioButton jrbmi = new JRadioButton(condModifiers[j]);
                                jrbmi.addMouseListener(this);
                                bg.add(jrbmi);
                                optionValuesPanel.add(jrbmi);
                                if (j == 0) {
                                    jrbmi.setSelected(true);
                                }
                            }
                        }
                    } else if (conditionalValues.equalsIgnoreCase("Chains")) {
                        condModifiers = activeSystem.getChainNames();
                        if (condModifiers != null && condModifiers.length > 0) {
                            isEnabled = true;
                            for (int j = 0; j < condModifiers.length; j++) {
                                JRadioButton jrbmi = new JRadioButton(condModifiers[j]);
                                jrbmi.addMouseListener(this);
                                bg.add(jrbmi);
                                optionValuesPanel.add(jrbmi, j);
                            }
                        }
                    }
                }
            }
            optionPanel.add(optionValuesPanel, BorderLayout.CENTER);
            optionPanel.setPreferredSize(optionPanel.getPreferredSize());
            optionsTabbedPane.addTab(option.getAttribute("name"), optionPanel);
            optionsTabbedPane.setEnabledAt(optionsTabbedPane.getTabCount() - 1, isEnabled);
        }
    }
    optionsTabbedPane.setPreferredSize(optionsTabbedPane.getPreferredSize());
    commandPanel.setLayout(borderLayout);
    commandPanel.add(optionsTabbedPane, BorderLayout.CENTER);
    commandPanel.validate();
    commandPanel.repaint();
    loadLogSettings();
    statusLabel.setText("  " + createCommandInput());
}