Example usage for java.util TreeSet addAll

Introduction

In this page you can find the example usage for java.util TreeSet addAll.

Prototype

public boolean addAll(Collection<? extends E> c)

Source Link

Document

Adds all of the elements in the specified collection to this set.

Usage

From source file:org.apache.hadoop.hbase.backup.impl.RestoreClientImpl.java

/**
 * Restore operation. Stage 2: resolved Backup Image dependency
 * @param backupManifestMap : tableName,  Manifest
 * @param sTableArray The array of tables to be restored
 * @param tTableArray The array of mapping tables to restore to
 * @return set of BackupImages restored//from   ww  w  .j  a  v a  2s  . co  m
 * @throws IOException exception
 */
private void restoreStage(HashMap<TableName, BackupManifest> backupManifestMap, TableName[] sTableArray,
        TableName[] tTableArray, boolean isOverwrite) throws IOException {
    TreeSet<BackupImage> restoreImageSet = new TreeSet<BackupImage>();
    boolean truncateIfExists = isOverwrite;
    try {
        for (int i = 0; i < sTableArray.length; i++) {
            TableName table = sTableArray[i];
            BackupManifest manifest = backupManifestMap.get(table);
            // Get the image list of this backup for restore in time order from old
            // to new.
            List<BackupImage> list = new ArrayList<BackupImage>();
            list.add(manifest.getBackupImage());
            List<BackupImage> depList = manifest.getDependentListByTable(table);
            list.addAll(depList);
            TreeSet<BackupImage> restoreList = new TreeSet<BackupImage>(list);
            LOG.debug("need to clear merged Image. to be implemented in future jira");
            restoreImages(restoreList.iterator(), table, tTableArray[i], truncateIfExists);
            restoreImageSet.addAll(restoreList);

            if (restoreImageSet != null && !restoreImageSet.isEmpty()) {
                LOG.info("Restore includes the following image(s):");
                for (BackupImage image : restoreImageSet) {
                    LOG.info("Backup: " + image.getBackupId() + " " + HBackupFileSystem
                            .getTableBackupDir(image.getRootDir(), image.getBackupId(), table));
                }
            }
        }
    } catch (Exception e) {
        LOG.error("Failed", e);
        throw new IOException(e);
    }
    LOG.debug("restoreStage finished");

}

From source file:org.gvsig.framework.web.service.impl.OGCInfoServiceImpl.java

public WMSInfo getCapabilitiesFromWMS(String urlServerWMS, TreeSet<String> listCrs, String format,
        boolean isCalledByWizard) throws ServerGeoException {
    WMSInfo wmsInfo = new WMSInfo();
    // put url on object WMSInfo
    wmsInfo.setServiceUrl(urlServerWMS);

    // Create hashmap to add the layers getted to the WMSInfo object
    Map<String, org.gvsig.framework.web.ogc.WMSLayer> layersMap = new HashMap<String, org.gvsig.framework.web.ogc.WMSLayer>();

    // Create conexion with server WMS
    try {//  www  .ja v a 2  s.  co m
        WMSClient wms = new WMSClient(urlServerWMS);
        wms.connect(null);

        // set server information
        WMSServiceInformation serviceInfo = wms.getServiceInformation();
        wmsInfo.setServiceAbstract(serviceInfo.abstr);
        wmsInfo.setServiceName(serviceInfo.name);
        wmsInfo.setServiceTitle(serviceInfo.title);

        // set id of the request wmsinfo (service name + calendar)
        int hashCode = (serviceInfo.name + Calendar.getInstance()).hashCode();
        wmsInfo.setId(hashCode);

        // get and set version
        String version = wms.getVersion();
        wmsInfo.setVersion(version);

        // get and set formats
        Vector formatVector = wms.getFormats();
        TreeSet<String> formatSet = new TreeSet<String>();
        formatSet.addAll(formatVector);
        wmsInfo.setFormatsSupported(formatSet);
        if (StringUtils.isEmpty(format)) {
            format = getFirstFormatSupported(formatSet);
            wmsInfo.setFormatSelected(format);
        }
        // check format
        if (isCalledByWizard || (!isCalledByWizard && formatVector.contains(format))) {
            wmsInfo.setFormatSelected(format);
            // get root layer
            WMSLayer rootLayer = wms.getRootLayer();
            // get crs (srs) (belong to layer)
            Vector crsVector = rootLayer.getAllSrs();
            // get and set all common crs supported
            TreeSet<String> crsTreeSet = new TreeSet<String>();
            crsTreeSet.addAll(crsVector);
            wmsInfo.setCrsSupported(crsTreeSet);

            // Create tree with layer values
            List<TreeNode> tree = new ArrayList<TreeNode>();

            // Create root node
            ArrayList<WMSLayer> children = rootLayer.getChildren();
            TreeNode rootNode = new TreeNode("rootLayer_" + rootLayer.getName());
            rootNode.setTitle(rootLayer.getTitle());
            if (children.isEmpty()) {
                rootNode.setFolder(false);
            } else {
                rootNode.setFolder(true);
                rootNode.setExpanded(true);
                generateWMSChildrenNodes(children, tree, listCrs, rootNode, layersMap, wmsInfo);
            }

            // Set childrenLayers paramrootLayer.getChildren()
            wmsInfo.setChildrenCount(children.size());

            // Only register the tree if it has a layer with crs defined
            if (rootNode.hasChildren()) {
                tree.add(rootNode);
                wmsInfo.setLayersTree(tree);
            }

            TreeSet<String> selCrs = new TreeSet<String>();
            if (listCrs.isEmpty()) {
                selCrs.addAll(wmsInfo.getCrsSupported());
            } else {
                selCrs.addAll(CollectionUtils.intersection(listCrs, wmsInfo.getCrsSupported()));

            }
            wmsInfo.setCrsSelected(selCrs);

            // Add map that contains info of all layers
            wmsInfo.setLayers(layersMap);
        }
    } catch (Exception exc) {
        // Show exception in log and create ServerGeoException which is
        // captured on controller and puts message to ajax response
        logger.error("Exception on getCapabilitiesFromWMS", exc);
        throw new ServerGeoException();
    }

    return wmsInfo;
}

From source file:net.sourceforge.fenixedu.presentationTier.Action.administrativeOffice.scholarship.utl.report.StudentLine.java

public LocalDate getFirstEnrolmentOnCurrentExecutionYear() {
    if (getRegistration() == null) {
        return null;
    }//from w w w.  j  a  v  a 2 s.  c o  m

    if (getRegistration().isInMobilityState()) {
        return getForExecutionYear().getBeginDateYearMonthDay().toLocalDate();
    }

    TreeSet<Enrolment> orderedEnrolmentSet = new TreeSet<Enrolment>(
            Collections.reverseOrder(CurriculumModule.COMPARATOR_BY_CREATION_DATE));
    orderedEnrolmentSet.addAll(getStudentCurricularPlan().getEnrolmentsByExecutionYear(getForExecutionYear()));

    return orderedEnrolmentSet.isEmpty() ? null
            : orderedEnrolmentSet.iterator().next().getCreationDateDateTime().toLocalDate();
}

From source file:net.sourceforge.fenixedu.presentationTier.Action.teacher.FinalWorkManagementAction.java

@SuppressWarnings({ "deprecation", "unused" })
public ActionForward listProposals(ActionMapping mapping, ActionForm form, HttpServletRequest request,
        HttpServletResponse response)/*  w ww . ja v  a  2  s.c  om*/
        throws FenixActionException, FenixServiceException, IllegalAccessException, InstantiationException {
    final User userView = Authenticate.getUser();

    TreeSet<Proposal> proposals = new TreeSet<Proposal>(new Comparator<Proposal>() {

        @Override
        public int compare(Proposal o1, Proposal o2) {
            return o1.getProposalNumber().compareTo(o2.getProposalNumber());
        }
    });
    proposals.addAll(userView.getPerson().findFinalDegreeWorkProposals());
    request.setAttribute("proposals", proposals);

    String executionDegreeString = (String) getFromRequest(request, "degree");
    ExecutionDegree executionDegree = FenixFramework.getDomainObject(executionDegreeString);

    if (executionDegree == null) {
        ActionErrors actionErrors = new ActionErrors();
        actionErrors.add("finalDegreeWorkProposal.ProposalPeriod.interval.undefined",
                new ActionError("finalDegreeWorkProposal.ProposalPeriod.interval.undefined"));
        saveErrors(request, actionErrors);
        return mapping.findForward("OutOfSubmisionPeriod");
    } else {
        final DegreeCurricularPlan dcp = executionDegree.getDegreeCurricularPlan();
        final Set<ExecutionDegree> executionDegrees = dcp.getExecutionDegreesWithProposalPeriodOpen();
        if (executionDegrees.isEmpty()) {
            ActionErrors actionErrors = new ActionErrors();
            actionErrors.add("finalDegreeWorkProposal.ProposalPeriod.interval.undefined",
                    new ActionError("finalDegreeWorkProposal.ProposalPeriod.interval.undefined"));
            saveErrors(request, actionErrors);
            return mapping.findForward("OutOfSubmisionPeriod");
        }

        /*
         * This is done this way because executionDegrees set is a tree set
         * reversely order by ExecutionYear, so the first element in the set
         * is the most recent degree which has a submission proposal period
         * opened.
         */
        final ExecutionDegree recentDegree = executionDegrees.iterator().next();
        request.setAttribute("executionYear", recentDegree.getExecutionYear().getExternalId().toString());
        request.setAttribute("explicitYear", recentDegree.getExecutionYear().getName());

        request.setAttribute("degree", recentDegree.getExternalId().toString());
        request.setAttribute("explicitDegree", recentDegree.getDegree().getName());

        request.setAttribute("executionDegrees", executionDegrees);
        return mapping.findForward("listProposals");
    }
}

From source file:uk.ac.bbsrc.tgac.miso.spring.ajax.PoolControllerHelperService.java

public JSONObject selectDilutionsByBarcodeList(HttpSession session, JSONObject json) {
    try {//from w ww . ja  v a  2 s  . c om
        if (json.has("barcodes")) {
            String barcodes = json.getString("barcodes");
            String[] codes = barcodes.split("\n");

            // make sure there are no duplicates and order the strings
            // by putitng the codes in a treeset        
            TreeSet<String> hcodes = new TreeSet<String>();
            hcodes.addAll(Arrays.asList(codes));

            StringBuilder sb = new StringBuilder();
            sb.append("<form action='/miso/pool/import' method='post'>");
            sb.append("<div style='width: 100%;'>");
            sb.append(processDilutions(hcodes));
            sb.append("</form>");
            sb.append("</div>");
            session.removeAttribute("barcodes");

            return JSONUtils.SimpleJSONResponse(sb.toString());
        }
    } catch (Exception e) {
        log.debug("Failed to generate barcode selection: ", e);
        return JSONUtils.SimpleJSONError("Failed to generate barcode selection");
    }
    return JSONUtils.SimpleJSONError("Cannot select barcodes");
}

From source file:uk.ac.bbsrc.tgac.miso.spring.ajax.PoolControllerHelperService.java

@Deprecated
public JSONObject selectLibraryDilutionsByBarcodeList(HttpSession session, JSONObject json) {
    try {/*  w w  w.jav a  2  s  . co m*/
        if (json.has("barcodes")) {
            String barcodes = json.getString("barcodes");
            String[] codes = barcodes.split("\n");

            // make sure there are no duplicates and order the strings
            // by putitng the codes in a treeset
            TreeSet<String> hcodes = new TreeSet<String>();
            hcodes.addAll(Arrays.asList(codes));

            StringBuilder sb = new StringBuilder();
            sb.append("<form action='/miso/pool/illumina/import' method='post'>");
            sb.append("<div style='width: 100%;'>");
            sb.append(processLibraryDilutions(hcodes));
            sb.append("</form>");
            sb.append("</div>");
            session.removeAttribute("barcodes");

            return JSONUtils.SimpleJSONResponse(sb.toString());
        }
    } catch (Exception e) {
        log.debug("Failed to generate barcode selection: ", e);
        return JSONUtils.SimpleJSONError("Failed to generate barcode selection");
    }
    return JSONUtils.SimpleJSONError("Cannot select barcodes");
}

From source file:uk.ac.bbsrc.tgac.miso.spring.ajax.PoolControllerHelperService.java

public JSONObject selectDilutionsByBarcodeFile(HttpSession session, JSONObject json) {
    try {/*from ww w . java2s.  com*/
        JSONObject barcodes = (JSONObject) session.getAttribute("barcodes");
        log.debug(barcodes.toString());
        if (barcodes.has("barcodes")) {
            JSONArray a = barcodes.getJSONArray("barcodes");

            // make sure there are no duplicates and order the strings
            // by putitng the codes in a treeset
            TreeSet<String> hcodes = new TreeSet<String>();
            hcodes.addAll(Arrays.asList((String[]) a.toArray(new String[0])));

            StringBuilder sb = new StringBuilder();
            sb.append("<form action='/miso/pool/import' method='post'>");
            sb.append("<div style='width: 100%;'>");
            sb.append(processDilutions(hcodes));
            sb.append("</form>");
            sb.append("</div>");
            session.removeAttribute("barcodes");

            return JSONUtils.SimpleJSONResponse(sb.toString());
        }
    } catch (Exception e) {
        log.debug("Failed to generate barcode selection: ", e);
        return JSONUtils.SimpleJSONError("Failed to generate barcode selection");
    }
    return JSONUtils.SimpleJSONError("Cannot select barcodes");
}

From source file:uk.ac.bbsrc.tgac.miso.spring.ajax.PoolControllerHelperService.java

@Deprecated
public JSONObject selectLibraryDilutionsByBarcodeFile(HttpSession session, JSONObject json) {
    try {//w  ww. j  av a  2  s  . co m
        JSONObject barcodes = (JSONObject) session.getAttribute("barcodes");
        log.debug(barcodes.toString());
        if (barcodes.has("barcodes")) {
            JSONArray a = barcodes.getJSONArray("barcodes");

            // make sure there are no duplicates and order the strings
            // by putitng the codes in a treeset
            TreeSet<String> hcodes = new TreeSet<String>();
            hcodes.addAll(Arrays.asList((String[]) a.toArray(new String[0])));

            StringBuilder sb = new StringBuilder();
            sb.append("<form action='/miso/pool/import' method='post'>");
            sb.append("<div style='width: 100%;'>");
            sb.append(processLibraryDilutions(hcodes));
            sb.append("</form>");
            sb.append("</div>");
            session.removeAttribute("barcodes");

            return JSONUtils.SimpleJSONResponse(sb.toString());
        }
    } catch (Exception e) {
        log.debug("Failed to generate barcode selection: ", e);
        return JSONUtils.SimpleJSONError("Failed to generate barcode selection");
    }
    return JSONUtils.SimpleJSONError("Cannot select barcodes");
}

From source file:uk.ac.bbsrc.tgac.miso.spring.ajax.PoolControllerHelperService.java

@Deprecated
public JSONObject select454EmPCRDilutionsByBarcodeList(HttpSession session, JSONObject json) {
    try {//from  www  .j a  v  a 2  s  .c  o m
        if (json.has("barcodes")) {
            String barcodes = json.getString("barcodes");
            String[] codes = barcodes.split("\n");

            // make sure there are no duplicates and order the strings
            // by putitng the codes in a treeset
            TreeSet<String> hcodes = new TreeSet<String>();
            hcodes.addAll(Arrays.asList(codes));

            StringBuilder sb = new StringBuilder();
            sb.append("<div style='width: 100%;'>");
            sb.append("<form action='/miso/pool/ls454/import' method='post'>");
            sb.append(processEmPcrDilutions(hcodes));
            sb.append("</form>");
            sb.append("</div>");

            session.removeAttribute("barcodes");

            return JSONUtils.SimpleJSONResponse(sb.toString());
        }
    } catch (Exception e) {
        log.debug("Failed to generate barcode selection: ", e);
        return JSONUtils.SimpleJSONError("Failed to generate barcode selection");
    }
    return JSONUtils.SimpleJSONError("Cannot select barcodes");
}

From source file:uk.ac.bbsrc.tgac.miso.spring.ajax.PoolControllerHelperService.java

@Deprecated
public JSONObject selectSolidEmPCRDilutionsByBarcodeList(HttpSession session, JSONObject json) {
    try {//from  www . j  a  va2  s .co m
        if (json.has("barcodes")) {
            String barcodes = json.getString("barcodes");
            String[] codes = barcodes.split("\n");

            // make sure there are no duplicates and order the strings
            // by putitng the codes in a treeset
            TreeSet<String> hcodes = new TreeSet<String>();
            hcodes.addAll(Arrays.asList(codes));

            StringBuilder sb = new StringBuilder();
            sb.append("<div style='width: 100%;'>");
            sb.append("<form action='/miso/pool/solid/import' method='post'>");
            sb.append(processEmPcrDilutions(hcodes));
            sb.append("</form>");
            sb.append("</div>");

            session.removeAttribute("barcodes");

            return JSONUtils.SimpleJSONResponse(sb.toString());
        }
    } catch (Exception e) {
        log.debug("Failed to generate barcode selection: ", e);
        return JSONUtils.SimpleJSONError("Failed to generate barcode selection");
    }
    return JSONUtils.SimpleJSONError("Cannot select barcodes");
}