Example usage for java.util TreeMap subclass-usage

Introduction

In this page you can find the example usage for java.util TreeMap subclass-usage.

Usage

From source file gda.util.userOptions.UserOptions.java

/**
 * UserOptions Class Use TreeMap as it is sorted by the key as opposed to HashMaps which are not.
 */
@SuppressWarnings({ "unchecked", "rawtypes" })
public class UserOptions extends java.util.TreeMap<String, UserOption> implements Serializable {

From source file net.imglib2.script.analysis.Histogram.java

/** An histogram of the image (or an image computed from an IFunction)
 * between its minimum and maximum values,
 * with as many bins as desired (defaults to 256 bins).
 * 
 * The number of bins is then the {@link Histogram#size()},
 * and the value of each bin (each element in this {@link ArrayList})

From source file script.imglib.analysis.Histogram.java

/** An histogram of the image (or an image computed from an IFunction)
 * between its minimum and maximum values,
 * with as many bins as desired (defaults to 256 bins).
 * 
 * The number of bins is then the {@link Histogram#size()},
 * and the value of each bin (each element in this {@link ArrayList})

From source file net.yacy.cora.protocol.HeaderFramework.java

/**
 * this class implements a key-value mapping, as a hashtable
 * The difference to ordinary hashtable implementations is that the
 * keys are not compared by the equal() method, but are always
 * treated as string and compared as
 * key.uppercase().equal(.uppercase(comparator))

From source file org.broadinstitute.gatk.utils.haplotype.EventMap.java

/**
 * Extract simple VariantContext events from a single haplotype
 *
 * User: depristo
 * Date: 3/27/13
 * Time: 8:35 AM

From source file org.mrgeo.rasterops.ColorScale.java

/**
 * @author jason.surratt
 *         <p/>
 *         Example file format: <ColorMap name="My Color Map"> <Scaling>MinMax</Scaling> <!-defaults
 *         to Absolute --> <ReliefShading>0</ReliefShading> <!-- defaults to 0/false -->
 *         <Interpolate>1</Interpolate> <!-- defaults to 1/true --> <NullColor color="0,0,0"

From source file org.mrgeo.colorscale.ColorScale.java

/**
 * @author jason.surratt
 *         <p/>
 *         Example file format: <ColorMap name="My Color Map"> <Scaling>MinMax</Scaling> <!-defaults
 *         to Absolute --> <ReliefShading>0</ReliefShading> <!-- defaults to 0/false -->
 *         <Interpolate>1</Interpolate> <!-- defaults to 1/true --> <NullColor color="0,0,0"

From source file FastTreeMap.java

/**
 * <p>A customized implementation of <code>java.util.TreeMap</code> designed
 * to operate in a multithreaded environment where the large majority of
 * method calls are read-only, instead of structural changes.  When operating
 * in "fast" mode, read calls are non-synchronized and write calls perform the
 * following steps:</p>

From source file org.broadinstitute.sting.utils.haplotype.EventMap.java

/**
 * Extract simple VariantContext events from a single haplotype
 *
 * User: depristo
 * Date: 3/27/13
 * Time: 8:35 AM

From source file org.ncic.bioinfo.sparkseq.algorithms.utils.haplotype.EventMap.java

/**
 * Author: wbc
 */
public class EventMap extends TreeMap<Integer, VariantContext> {
    private final static Logger logger = Logger.getLogger(EventMap.class);
    protected final static int MIN_NUMBER_OF_EVENTS_TO_COMBINE_INTO_BLOCK_SUBSTITUTION = 3;

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