List of usage examples for java.util List retainAll
boolean retainAll(Collection<?> c);
From source file:cepdest.pattern.holder.EnhancedPatternsHolder.java
public List<String> getPatternIdForItinerary(Itinerary it) { List<String> finalPatternIds = null; double chainLength = 1; ConfigProvider config = ConfigProviderFactory.getConfig(); switch (config.getPredictorConfig().getCurrentIterationMode()) { case BACKWARDS: AreaOfInterest a = it.getAllNamedAreas().get(it.getNumOfAllNamedAreas() - 1); GroupOfEnhancedPatternNode node = getNodesWithArea(a); finalPatternIds = new ArrayList(node.getOutboundPatternIds()); int lastIndex = it.getNumOfAllNamedAreas() - 1; for (int i = lastIndex; i >= 1; i--) { AreaOfInterest a1 = it.getAllNamedAreas().get(i); AreaOfInterest a2 = it.getAllNamedAreas().get(i - 1); GroupOfEnhancedPatternNode node2 = getNodesWithArea(a2); List<String> cPatternIds = node2.getPatternIdsForSon(a1.getID()); if (cPatternIds != null) { List<String> aux = new ArrayList(finalPatternIds); finalPatternIds.retainAll(cPatternIds); if (finalPatternIds.isEmpty()) { finalPatternIds = aux; break; } else { for (String patternId : finalPatternIds) { List<Integer> pos1 = node.getPositionsForPatternId(patternId); List<Integer> pos2 = node2.getPositionsForPatternId(patternId); if (!compatiblePositions(pos1, pos2)) { finalPatternIds = aux; break; }/*from w w w. j av a 2 s .co m*/ } } } else { break; } chainLength++; node = node2; } break; case FULL_FORWARD: int i = 0; while (i < it.getNumOfAllNamedAreas() - 1) { AreaOfInterest a1 = it.getAllNamedAreas().get(i); AreaOfInterest a2 = it.getAllNamedAreas().get(i + 1); node = getNodesWithArea(a1); List<String> cPatternIds = node.getPatternIdsForSon(a2.getID()); if (finalPatternIds != null) { if (cPatternIds != null) { finalPatternIds.retainAll(cPatternIds); chainLength++; } else { finalPatternIds = null; } } else if (cPatternIds != null && !cPatternIds.isEmpty()) { finalPatternIds = new ArrayList<String>(cPatternIds); chainLength = 2; } i++; } break; case FORWARD: for (i = 0; i < it.getNumOfOldNamedAreas() - 1; i++) { AreaOfInterest a1 = it.getOldNamedAreas().get(i); AreaOfInterest a2 = it.getOldNamedAreas().get(i + 1); node = getNodesWithArea(a1); List<String> cPatternIds = node.getPatternIdsForSon(a2.getID()); if (finalPatternIds != null) { if (cPatternIds != null) { finalPatternIds.retainAll(cPatternIds); chainLength++; } else { AreaOfInterest iArea = it.getOldNamedAreas().get(0); AreaOfInterest fArea = it.getOldNamedAreas().get(it.getNumOfOldNamedAreas() - 1); EnhancedPatternNode iNode = getNodeWithArea(iArea); EnhancedPatternNode fNode = getNodeWithArea(fArea); finalPatternIds = new ArrayList(iNode.getPatternIds()); finalPatternIds.retainAll(fNode.getPatternIds()); chainLength = 1; break; } } else if (cPatternIds != null && !cPatternIds.isEmpty()) { finalPatternIds = new ArrayList<String>(cPatternIds); chainLength = 2; } } break; } if (finalPatternIds != null) { finalPatternIds.add(String.valueOf(chainLength / it.getNumOfAllNamedAreas())); } return finalPatternIds; }
From source file:org.ebayopensource.turmeric.eclipse.utils.test.collections.TestListUtil.java
/** * Test method for {@link org.ebayopensource.turmeric.maveneclipseapi.internal.collections.ListUtil#transformed(org.ebayopensource.turmeric.maveneclipseapi.internal.collections.Transformer, java.util.List)}. *///from w ww . j a v a 2 s . co m @Test public void testTransformedTransformerOfTListOfQ() { List<String> collection = new ArrayList<String>(); collection.add("Arc' Terryx"); collection.add("Mountain Hardwear"); collection.add("Black Diamond"); final Transformer<String> transformer = new Transformer<String>() { private static final long serialVersionUID = 1631027078150099602L; @Override public String transform(final Object input) { return ObjectUtils.toString(input).toLowerCase(); } }; List<String> list = ListUtil.transformed(transformer, collection); for (int i = 0; i < collection.size(); i++) { String expected = collection.get(i); String actual = list.get(i); Assert.assertNotSame(expected, actual); Assert.assertTrue(expected.equalsIgnoreCase(actual)); } String item = "3dfx"; list.add(item); Assert.assertTrue(list.contains(item)); list.remove(item); Assert.assertFalse(list.contains(item)); list.add(0, item); Assert.assertTrue(list.indexOf(item) == 0); Assert.assertTrue(list.lastIndexOf(item) == 0); list.remove(0); list.set(0, item); Assert.assertTrue(list.indexOf(item) == 0); Collection<String> data = new ArrayList<String>(2); data.add("Voodoo"); data.add("Radeon"); list.addAll(data); Assert.assertTrue(list.containsAll(data)); list.removeAll(data); Assert.assertFalse(list.containsAll(data)); list.addAll(0, data); list.retainAll(data); }
From source file:org.onosproject.t3.impl.TroubleshootManager.java
/** * Checks that two hosts are bridged (L2Unicast). * * @param source the source host//from w w w.j a va 2 s. c o m * @param destination the destination host * @return true if bridged. * @throws ConfigException if config can't be properly retrieved */ private boolean areBridged(Host source, Host destination) throws ConfigException { //If the locations is not the same we don't even check vlan or subnets if (Collections.disjoint(source.locations(), destination.locations())) { return false; } if (!source.vlan().equals(VlanId.NONE) && !destination.vlan().equals(VlanId.NONE) && !source.vlan().equals(destination.vlan())) { return false; } InterfaceConfig interfaceCfgH1 = networkConfigService.getConfig(source.location(), InterfaceConfig.class); InterfaceConfig interfaceCfgH2 = networkConfigService.getConfig(destination.location(), InterfaceConfig.class); if (interfaceCfgH1 != null && interfaceCfgH2 != null) { //following can be optimized but for clarity is left as is Interface intfH1 = interfaceCfgH1.getInterfaces().stream().findFirst().get(); Interface intfH2 = interfaceCfgH2.getInterfaces().stream().findFirst().get(); if (source.vlan().equals(VlanId.NONE) && !destination.vlan().equals(VlanId.NONE)) { return intfH1.vlanUntagged().equals(destination.vlan()) || intfH1.vlanNative().equals(destination.vlan()); } if (!source.vlan().equals(VlanId.NONE) && destination.vlan().equals(VlanId.NONE)) { return intfH2.vlanUntagged().equals(source.vlan()) || intfH2.vlanNative().equals(source.vlan()); } if (!intfH1.vlanNative().equals(intfH2.vlanNative())) { return false; } if (!intfH1.vlanUntagged().equals(intfH2.vlanUntagged())) { return false; } List<InterfaceIpAddress> intersection = new ArrayList<>(intfH1.ipAddressesList()); intersection.retainAll(intfH2.ipAddressesList()); if (intersection.size() == 0) { return false; } } return true; }
From source file:hydrograph.ui.propertywindow.widgets.utility.SchemaSyncUtility.java
/** * Add and remove data from map fields those are not present in outer schema, use to sync outer schema with transform and aggregate internal fields. * * @param outSchema the out schema/*from w w w . j av a 2 s . co m*/ * @param transformMapping the transform mapping * @return the list */ public List<NameValueProperty> filterCommonMapFields(List<NameValueProperty> outSchema, TransformMapping transformMapping) { List<NameValueProperty> mapNameValueProperties = transformMapping.getMapAndPassthroughField(); for (NameValueProperty nameValueProperty : outSchema) { boolean isPresent = false; if (!mapNameValueProperties.contains(nameValueProperty)) { for (MappingSheetRow mappingSheetRow : transformMapping.getMappingSheetRows()) { FilterProperties tempFilterProperties = new FilterProperties(); tempFilterProperties.setPropertyname(nameValueProperty.getPropertyValue()); if (mappingSheetRow.getOutputList().contains(tempFilterProperties)) { isPresent = true; break; } } if (!isPresent) mapNameValueProperties.add(nameValueProperty); } } mapNameValueProperties.retainAll(outSchema); return mapNameValueProperties; }
From source file:org.entrystore.repository.impl.ContextManagerImpl.java
/** * Intersection//www . ja v a 2 s . c om * @param entries entries * @param mdEntries entries from metadata query * @return the intersected entries. */ private List<Entry> intersectEntries(List<Entry> entries, List<Entry> mdEntries) { if (mdEntries != null && entries != null) { mdEntries.retainAll(entries); return mdEntries; } if (mdEntries != null) { return mdEntries; } if (entries != null) { return entries; } return null; }
From source file:org.phenotips.export.internal.DataToCellConverter.java
public DataSection isSolvedHeader(Set<String> enabledFields) throws Exception { String sectionName = "isSolved"; List<String> fields = new ArrayList<>(Arrays.asList("solved", "solved__pubmed_id", "solved__notes")); fields.retainAll(enabledFields); Set<String> fieldSet = new HashSet<>(fields); this.enabledHeaderIdsBySection.put(sectionName, fieldSet); DataSection headerSection = new DataSection(); if (fields.isEmpty()) { return null; }//from w ww . j a v a 2s . co m int hX = 0; for (String fieldId : fields) { DataCell headerCell = new DataCell( this.translationManager.translate("phenotips.export.excel.label.solvedStatus." + fieldId), hX, 1, StyleOption.HEADER); headerSection.addCell(headerCell); hX++; } DataCell headerCell = new DataCell( this.translationManager.translate("phenotips.export.excel.label.solvedStatus"), 0, 0, StyleOption.LARGE_HEADER); headerCell.addStyle(StyleOption.HEADER); headerSection.addCell(headerCell); return headerSection; }
From source file:org.phenotips.export.internal.DataToCellConverter.java
public DataSection documentInfoHeader(Set<String> enabledFields) throws Exception { String sectionName = "documentInfo"; // Must be linked to keep order; in other sections as well List<String> fields = new ArrayList<>(Arrays.asList("referrer", "creationDate", "author", "date")); fields.retainAll(enabledFields); Set<String> fieldSet = new HashSet<>(fields); this.enabledHeaderIdsBySection.put(sectionName, fieldSet); DataSection headerSection = new DataSection(); if (fields.isEmpty()) { return null; }// www .j a v a2s.co m int hX = 0; for (String fieldId : fields) { DataCell headerCell = new DataCell( this.translationManager.translate("phenotips.exportPreferences.field." + fieldId), hX, 1, StyleOption.HEADER); headerSection.addCell(headerCell); hX++; } DataCell headerCell = new DataCell( this.translationManager.translate("phenotips.export.excel.label.documentInfo"), 0, 0, StyleOption.LARGE_HEADER); headerCell.addStyle(StyleOption.HEADER); headerSection.addCell(headerCell); return headerSection; }
From source file:au.org.ala.delta.intkey.directives.TaxonListArgument.java
@Override public List<Item> parseInput(Queue<String> inputTokens, IntkeyContext context, String directiveName, StringBuilder stringRepresentationBuilder) throws IntkeyDirectiveParseException { List<String> selectedKeywordsOrTaxonNumbers = new ArrayList<String>(); boolean overrideExcludedTaxa = false; String token = inputTokens.poll(); if (token != null && token.equalsIgnoreCase(OVERRIDE_EXCLUDED_TAXA)) { overrideExcludedTaxa = true;/*from w ww . java 2 s. c o m*/ token = inputTokens.poll(); } List<Item> taxa = null; SelectionMode selectionMode = context.displayKeywords() ? SelectionMode.KEYWORD : SelectionMode.LIST; if (token != null) { if (token.equalsIgnoreCase(DEFAULT_DIALOG_WILDCARD)) { // do nothing - default selection mode is already set above. } else if (token.equalsIgnoreCase(KEYWORD_DIALOG_WILDCARD)) { selectionMode = SelectionMode.KEYWORD; } else if (token.equalsIgnoreCase(LIST_DIALOG_WILDCARD)) { selectionMode = SelectionMode.LIST; } else if (token.equalsIgnoreCase(LIST_DIALOG_AUTO_SELECT_SOLE_ITEM_WILDCARD)) { selectionMode = SelectionMode.LIST_AUTOSELECT_SINGLE_VALUE; } else { taxa = new ArrayList<Item>(); while (token != null) { try { taxa.addAll(ParsingUtils.parseTaxonToken(token, context)); selectedKeywordsOrTaxonNumbers.add(token); token = inputTokens.poll(); } catch (IllegalArgumentException ex) { throw new IntkeyDirectiveParseException("UnrecognizedTaxonKeyword.error", token); } } if (!(overrideExcludedTaxa || _selectFromAll)) { taxa.retainAll(context.getIncludedTaxa()); } } } if (taxa == null) { List<String> selectedKeywords = new ArrayList<String>(); DirectivePopulator populator = context.getDirectivePopulator(); if (selectionMode == SelectionMode.KEYWORD) { taxa = populator.promptForTaxaByKeyword(directiveName, !(overrideExcludedTaxa || _selectFromAll), _noneSelectionPermitted, false, null, selectedKeywords); } else { boolean autoSelectSingleValue = (selectionMode == SelectionMode.LIST_AUTOSELECT_SINGLE_VALUE); taxa = populator.promptForTaxaByList(directiveName, !(overrideExcludedTaxa || _selectFromAll), autoSelectSingleValue, false, false, null, selectedKeywords); } if (taxa == null) { // cancelled return null; } // Put selected keywords or taxon numbers into a collection to use // to build the string representation. if (!selectedKeywords.isEmpty()) { for (String selectedKeyword : selectedKeywords) { if (selectedKeyword.contains(" ")) { // Enclose any keywords that contain spaces in quotes // for the string representation selectedKeywordsOrTaxonNumbers.add("\"" + selectedKeyword + "\""); } else { selectedKeywordsOrTaxonNumbers.add(selectedKeyword); } } } else { List<Integer> selectedTaxonNumbers = new ArrayList<Integer>(); for (int i = 0; i < taxa.size(); i++) { Item taxon = taxa.get(i); selectedTaxonNumbers.add(taxon.getItemNumber()); } selectedKeywordsOrTaxonNumbers.add(Utils.formatIntegersAsListOfRanges(selectedTaxonNumbers)); } } // build the string representation of the directive call stringRepresentationBuilder.append(" "); if (overrideExcludedTaxa) { stringRepresentationBuilder.append(OVERRIDE_EXCLUDED_TAXA); stringRepresentationBuilder.append(" "); } stringRepresentationBuilder.append(StringUtils.join(selectedKeywordsOrTaxonNumbers, " ")); if (taxa.size() == 0 && !_noneSelectionPermitted) { throw new IntkeyDirectiveParseException("NoTaxaInSet.error"); } Collections.sort(taxa); return taxa; }
From source file:au.org.ala.delta.intkey.directives.CharacterListArgument.java
@Override public List<au.org.ala.delta.model.Character> parseInput(Queue<String> inputTokens, IntkeyContext context, String directiveName, StringBuilder stringRepresentationBuilder) throws IntkeyDirectiveParseException { List<String> selectedKeywordsOrCharacterNumbers = new ArrayList<String>(); boolean overrideExcludedCharacters = false; String token = inputTokens.poll(); if (token != null && token.equalsIgnoreCase(OVERRIDE_EXCLUDED_CHARACTERS)) { overrideExcludedCharacters = true; token = inputTokens.poll();// w w w.ja v a 2 s . c om } List<au.org.ala.delta.model.Character> characters = null; SelectionMode selectionMode = context.displayKeywords() ? SelectionMode.KEYWORD : SelectionMode.LIST; DirectivePopulator populator = context.getDirectivePopulator(); if (token != null) { if (token.equalsIgnoreCase(DEFAULT_DIALOG_WILDCARD)) { // do nothing - default selection mode is already set above. } else if (token.equalsIgnoreCase(KEYWORD_DIALOG_WILDCARD)) { selectionMode = SelectionMode.KEYWORD; } else if (token.equalsIgnoreCase(LIST_DIALOG_WILDCARD)) { selectionMode = SelectionMode.LIST; } else { characters = new ArrayList<au.org.ala.delta.model.Character>(); while (token != null) { try { characters.addAll(ParsingUtils.parseCharacterToken(token, context)); selectedKeywordsOrCharacterNumbers.add(token); token = inputTokens.poll(); } catch (IllegalArgumentException ex) { throw new IntkeyDirectiveParseException("UnrecognizedCharacterKeyword.error", token); } } if (!(overrideExcludedCharacters || _selectFromAll)) { characters.retainAll(context.getIncludedCharacters()); } } } if (characters == null) { if (context.isProcessingDirectivesFile()) { //ignore incomplete directives when processing an input file return null; } List<String> selectedKeywords = new ArrayList<String>(); if (selectionMode == SelectionMode.KEYWORD) { characters = populator.promptForCharactersByKeyword(directiveName, !(overrideExcludedCharacters || _selectFromAll), _noneSelectionPermitted, selectedKeywords); } else { characters = populator.promptForCharactersByList(directiveName, !(overrideExcludedCharacters || _selectFromAll), selectedKeywords); } if (characters == null) { // cancelled return null; } // Put selected keywords or taxon numbers into a collection to use // to build the string representation. if (!selectedKeywords.isEmpty()) { for (String selectedKeyword : selectedKeywords) { if (selectedKeyword.contains(" ")) { // Enclose any keywords that contain spaces in quotes // for the string representation selectedKeywordsOrCharacterNumbers.add("\"" + selectedKeyword + "\""); } else { selectedKeywordsOrCharacterNumbers.add(selectedKeyword); } } } else { List<Integer> selectedCharacterNumbers = new ArrayList<Integer>(); for (int i = 0; i < characters.size(); i++) { Character ch = characters.get(i); selectedCharacterNumbers.add(ch.getCharacterId()); } selectedKeywordsOrCharacterNumbers .add(Utils.formatIntegersAsListOfRanges(selectedCharacterNumbers)); } } // build the string representation of the directive call stringRepresentationBuilder.append(" "); if (overrideExcludedCharacters) { stringRepresentationBuilder.append(OVERRIDE_EXCLUDED_CHARACTERS); stringRepresentationBuilder.append(" "); } stringRepresentationBuilder.append(StringUtils.join(selectedKeywordsOrCharacterNumbers, " ")); if (characters.size() == 0 && !_noneSelectionPermitted) { throw new IntkeyDirectiveParseException("NoCharactersInSet.error"); } Collections.sort(characters); return characters; }
From source file:org.phenotips.export.internal.DataToCellConverter.java
public DataSection medicalHistoryHeader(Set<String> enabledFields) throws Exception { String sectionName = "medicalHistory"; List<String> fields = new ArrayList<>(Arrays.asList("allergies", "global_age_of_onset", "medical_history")); fields.retainAll(enabledFields); Set<String> fieldSet = new HashSet<>(fields); this.enabledHeaderIdsBySection.put(sectionName, fieldSet); DataSection headerSection = new DataSection(); if (fields.isEmpty()) { return null; }//w w w . j av a 2s . c o m int hX = 0; for (String fieldId : fields) { DataCell headerCell = new DataCell( this.translationManager.translate("phenotips.export.excel.label.medicalHistory." + fieldId), hX, 1, StyleOption.HEADER); headerSection.addCell(headerCell); hX++; } DataCell headerCell = new DataCell( this.translationManager.translate("phenotips.export.excel.label.medicalHistory"), 0, 0, StyleOption.LARGE_HEADER); headerCell.addStyle(StyleOption.HEADER); headerSection.addCell(headerCell); return headerSection; }