Example usage for java.util LinkedHashMap keySet

Introduction

In this page you can find the example usage for java.util LinkedHashMap keySet.

Prototype

public Set<K> keySet() 

Source Link

Document

Returns a Set view of the keys contained in this map.

Usage

From source file:com.streamsets.pipeline.lib.generator.delimited.DelimitedCharDataGenerator.java

private void writeHeader(Record record, String key) throws DataGeneratorException, IOException {
    Field field = record.get();//from  ww  w . j ava  2s. c o  m

    if (field.getType() == Field.Type.LIST) {
        writeLine(record, key);
    } else if (field.getType() == Field.Type.LIST_MAP) {
        LinkedHashMap<String, Field> columns = field.getValueAsListMap();
        Set<String> values = columns.keySet(); // Set is backed by LinkedHashMap, so order is maintained
        printer.printRecord(values);
    } else {
        throw new DataGeneratorException(Errors.DELIMITED_GENERATOR_00, record.getHeader().getSourceId(),
                field.getType());
    }

}

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From source file:ubic.gemma.analysis.service.CompositeSequenceGeneMapperService.java

/**
 * @param officialSymbols//from  ww  w.  j  av a2 s . c  o  m
 * @param arrayDesigns to look in
 * @return LinkedHashMap<Gene, Collection<CompositeSequence>>
 */
public LinkedHashMap<Gene, Collection<CompositeSequence>> getGene2ProbeMapByOfficialSymbols(
        Collection<String> officialSymbols, Collection<ArrayDesign> arrayDesigns) {

    LinkedHashMap<String, Collection<Gene>> genesMap = findGenesByOfficialSymbols(officialSymbols);

    Set<String> geneOfficialSymbolKeyset = genesMap.keySet();

    LinkedHashMap<Gene, Collection<CompositeSequence>> compositeSequencesForGeneMap = new LinkedHashMap<Gene, Collection<CompositeSequence>>();

    for (String officialSymbol : geneOfficialSymbolKeyset) {
        log.debug("official symbol: " + officialSymbol);
        Collection<Gene> genes = genesMap.get(officialSymbol);
        for (Gene g : genes) {
            Collection<CompositeSequence> compositeSequences = geneService.getCompositeSequencesById(g.getId());
            for (CompositeSequence sequence : compositeSequences) {
                if (arrayDesigns.contains(sequence.getArrayDesign())) {
                    if (compositeSequencesForGeneMap.get(g) == null) {
                        compositeSequencesForGeneMap.put(g, new HashSet<CompositeSequence>());
                    }
                    compositeSequencesForGeneMap.get(g).add(sequence);
                }
            }
        }
    }
    return compositeSequencesForGeneMap;
}

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From source file:ubic.gemma.core.analysis.service.CompositeSequenceGeneMapperService.java

/**
 * @param arrayDesigns    to look in//from  ww w  .j a  v  a  2s . co m
 * @param officialSymbols official symbols
 * @return map of gene to composite sequences
 */
public LinkedHashMap<Gene, Collection<CompositeSequence>> getGene2ProbeMapByOfficialSymbols(
        Collection<String> officialSymbols, Collection<ArrayDesign> arrayDesigns) {

    LinkedHashMap<String, Collection<Gene>> genesMap = this.findGenesByOfficialSymbols(officialSymbols);

    Set<String> geneOfficialSymbolKeySet = genesMap.keySet();

    LinkedHashMap<Gene, Collection<CompositeSequence>> compositeSequencesForGeneMap = new LinkedHashMap<>();

    for (String officialSymbol : geneOfficialSymbolKeySet) {
        log.debug("official symbol: " + officialSymbol);
        Collection<Gene> genes = genesMap.get(officialSymbol);
        for (Gene g : genes) {
            Collection<CompositeSequence> compositeSequences = geneService.getCompositeSequencesById(g.getId());
            for (CompositeSequence sequence : compositeSequences) {
                if (arrayDesigns.contains(sequence.getArrayDesign())) {
                    if (compositeSequencesForGeneMap.get(g) == null) {
                        compositeSequencesForGeneMap.put(g, new HashSet<CompositeSequence>());
                    }
                    compositeSequencesForGeneMap.get(g).add(sequence);
                }
            }
        }
    }
    return compositeSequencesForGeneMap;
}

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From source file:com.plnyyanks.frcnotebook.datafeed.EventListFetcher.java

@Override
protected String doInBackground(Activity... args) {

    listActivity = args[0];/*from w w w. j av  a  2 s . c  o  m*/
    year = PreferenceHandler.getYear();
    LinkedHashMap<String, ListItem> data;
    data = TBADatafeed.fetchEvents_TBAv1(year);

    keys = new ArrayList<String>();
    keys.addAll(data.keySet());

    events = new ArrayList<ListItem>();
    events.addAll(data.values());

    return "";
}

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From source file:org.sonar.server.es.Facets.java

public Set<String> getBucketKeys(String facetName) {
    LinkedHashMap<String, Long> facet = facetsByName.get(facetName);
    if (facet != null) {
        return facet.keySet();
    }/*  w  w w .j ava2  s  .  c o m*/
    return Collections.emptySet();
}

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From source file:edu.usu.sdl.opencatalog.api.impl.LookupServiceImpl.java

@Override
public <T extends BaseEntity> List<T> findLookup(Class<T> lookTableClass, boolean all) {
    List<T> correctedList = new ArrayList<>();

    //Route request
    WebTarget target = getRestTarget(SERVICE + "/" + lookTableClass.getSimpleName());
    Response response = target.queryParam("all", all).request(MediaType.APPLICATION_JSON).get();

    //TODO: handle failed case (Look at status to provide meaningful errors

    //String rawData = response.readEntity(String.class);

    //      try// w  w  w.ja  v a2  s .  c o  m
    //      {
    //         ObjectMapper objectMapper = new ObjectMapper();
    //         correctedList = objectMapper.readValue(rawData, new TypeReference<List<T>>() {});
    //      } catch (IOException ex)
    //      {
    //         throw new RuntimeException(ex);
    //      }

    List<LinkedHashMap<String, String>> linkedMap = response.readEntity(new GenericType<List>() {
    });

    if (linkedMap.isEmpty() == false) {
        for (LinkedHashMap<String, String> map : linkedMap) {
            try {
                T dataObject = lookTableClass.newInstance();
                for (String key : map.keySet()) {
                    BeanUtils.setProperty(dataObject, key, map.get(key));
                }
                correctedList.add(dataObject);
            } catch (InstantiationException | IllegalAccessException | InvocationTargetException ex) {
                log.log(Level.SEVERE, null, ex);
            }
        }
    }

    return correctedList;
}

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From source file:com.nestlabs.sdk.StructureTest.java

@Test
public void testWhereDescribeContents_shouldReturnZero() {
    try {/*from   www.  ja  v a  2  s  . c o m*/
        String json = IOUtils.toString(this.getClass().getResourceAsStream(TEST_STRUCTURE_JSON), "utf-8");
        Structure structure = mapper.readValue(json, Structure.class);
        LinkedHashMap<String, Structure.Where> wheres = structure.getWheres();
        for (String whereId : wheres.keySet()) {
            assertEquals(wheres.get(whereId).describeContents(), 0);
        }
    } catch (IOException e) {
        e.printStackTrace();
        Assert.fail();
    }
}

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From source file:com.concursive.connect.web.modules.setup.utils.SetupUtils.java

public static void insertDefaultSiteConfig(Connection db, String fileLibraryPath, Project project,
        String purpose, ApplicationPrefs prefs) throws Exception {
    LOG.debug("insertDefaultSiteConfig");
    // Validate the pre-reqs
    if (!StringUtils.hasText(project.getTitle()) || !StringUtils.hasText(project.getShortDescription())
            || !StringUtils.hasText(project.getKeywords())) {
        throw new Exception("Title, description, keywords are required");
    }//  w w  w  .ja v a  2s  . com

    // Load the categories
    ProjectCategoryList categoryList = new ProjectCategoryList();
    categoryList.setTopLevelOnly(true);
    categoryList.buildList(db);

    // Determine the default's category
    int categoryId = categoryList.getIdFromValue("Groups");

    // Determine the tabs
    boolean isPrivate = false;
    ProjectCategoryList validCategoryList = new ProjectCategoryList();
    if ("social".equals(purpose)) {
        validCategoryList.add(categoryList.getFromValue("Groups"));
        validCategoryList.add(categoryList.getFromValue("People"));
        validCategoryList.add(categoryList.getFromValue("Events"));
        validCategoryList.add(categoryList.getFromValue("Ideas"));
        validCategoryList.add(categoryList.getFromValue("Sponsors"));
    } else if ("directory".equals(purpose)) {
        validCategoryList.add(categoryList.getFromValue("Businesses"));
        validCategoryList.add(categoryList.getFromValue("Organizations"));
        validCategoryList.add(categoryList.getFromValue("Groups"));
        validCategoryList.add(categoryList.getFromValue("People"));
        validCategoryList.add(categoryList.getFromValue("Places"));
        validCategoryList.add(categoryList.getFromValue("Events"));
        validCategoryList.add(categoryList.getFromValue("Ideas"));
    } else if ("community".equals(purpose)) {
        validCategoryList.add(categoryList.getFromValue("Groups"));
        validCategoryList.add(categoryList.getFromValue("People"));
        validCategoryList.add(categoryList.getFromValue("Ideas"));
    } else if ("intranet".equals(purpose)) {
        isPrivate = true;
        prefs.add(ApplicationPrefs.INFORMATION_IS_SENSITIVE, "true");
        prefs.add(ApplicationPrefs.USERS_CAN_REGISTER, "false");
        prefs.add(ApplicationPrefs.USERS_CAN_INVITE, "false");
        prefs.add(ApplicationPrefs.USERS_CAN_START_PROJECTS, "true");
        validCategoryList.add(categoryList.getFromValue("Groups"));
        validCategoryList.add(categoryList.getFromValue("People"));
        validCategoryList.add(categoryList.getFromValue("Events"));
        validCategoryList.add(categoryList.getFromValue("Ideas"));
        validCategoryList.add(categoryList.getFromValue("Projects"));
    } else if ("projects".equals(purpose)) {
        isPrivate = true;
        prefs.add(ApplicationPrefs.INFORMATION_IS_SENSITIVE, "true");
        prefs.add(ApplicationPrefs.USERS_CAN_REGISTER, "false");
        prefs.add(ApplicationPrefs.USERS_CAN_INVITE, "false");
        validCategoryList.add(categoryList.getFromValue("Groups"));
        validCategoryList.add(categoryList.getFromValue("People"));
        validCategoryList.add(categoryList.getFromValue("Projects"));
    } else if ("web".equals(purpose)) {
        validCategoryList.add(categoryList.getFromValue("Products"));
        validCategoryList.add(categoryList.getFromValue("Services"));
        validCategoryList.add(categoryList.getFromValue("Partners"));
        validCategoryList.add(categoryList.getFromValue("Groups"));
        validCategoryList.add(categoryList.getFromValue("People"));
        validCategoryList.add(categoryList.getFromValue("Events"));
        validCategoryList.add(categoryList.getFromValue("Ideas"));
        validCategoryList.add(categoryList.getFromValue("Projects"));
    }
    // Update the related tabs, or leave all enabled
    if (validCategoryList.size() > 0) {
        for (ProjectCategory category : categoryList) {
            category.setEnabled(validCategoryList.get(category) != null);
            category.setSensitive(isPrivate);
            category.update(db);
        }
    }

    // Determine the profile visibility
    project.setUpdateAllowGuests(true);
    project.setAllowGuests(isPrivate ? false : true);
    project.setUpdateAllowParticipants(true);
    project.setAllowParticipants(true);
    project.setUpdateMembershipRequired(true);
    project.setMembershipRequired(false);
    project.setApproved(true);

    // Determine the tabs
    project.setShowProfile(true);
    project.getFeatures().setLabelProfile("Overview");
    project.setShowNews(true);
    project.getFeatures().setLabelNews("Blog");
    project.setShowReviews(true);
    project.setShowWiki(true);
    project.setShowCalendar(true);
    project.setShowDiscussion(true);
    project.setShowDocuments(true);
    project.setShowClassifieds(true);
    project.setShowBadges(true);
    project.setShowLists(true);
    project.setShowIssues(true);
    project.setShowTeam(true);
    project.getFeatures().setLabelTickets("Issues");
    project.getFeatures().setLabelTeam("Participants");
    project.setShowMessages(true);

    // Determine the record details
    project.setUniqueId("main-profile");
    project.setGroupId(1);
    project.setCategoryId(categoryId);
    project.setOwner(1);
    project.setEnteredBy(1);
    project.setModifiedBy(1);
    project.insert(db);
    project.updateFeatures(db);
    project.setSystemDefault(true);
    project.updateSystemDefault(db);

    // Build a list of roles
    LookupList roleList = CacheUtils.getLookupList("lookup_project_role");

    // Build a list of the default permissions
    PermissionList permissionList = new PermissionList();
    permissionList.setProjectId(project.getId());
    permissionList.buildList(db);

    // Modify the permissions for the default profile
    LinkedHashMap<String, Integer> permissionMap = new LinkedHashMap<String, Integer>();
    permissionMap.put("project-tickets-view", TeamMember.MEMBER);
    permissionMap.put("project-tickets-other", TeamMember.CHAMPION);
    permissionMap.put("project-tickets-add", TeamMember.MEMBER);
    permissionMap.put("project-tickets-edit", TeamMember.CHAMPION);
    permissionMap.put("project-tickets-assign", TeamMember.CHAMPION);
    permissionMap.put("project-tickets-close", TeamMember.CHAMPION);
    permissionMap.put("project-tickets-delete", TeamMember.MANAGER);

    for (String name : permissionMap.keySet()) {
        Permission permission = permissionList.get(name);
        permission.setUserLevel(roleList.getIdFromLevel(permissionMap.get(name)));
        LOG.debug("Updating a permission: " + name);
        permission.update(db);
    }

    // Get the admin role
    int adminRowLevel = roleList.getIdFromValue("Manager");

    // Add the admins as a member
    UserList userList = new UserList();
    userList.setAdmin(Constants.TRUE);
    userList.buildList(db);
    for (User thisUser : userList) {
        TeamMember thisMember = new TeamMember();
        thisMember.setProjectId(project.getId());
        thisMember.setUserId(thisUser.getId());
        thisMember.setUserLevel(adminRowLevel);
        thisMember.setEnteredBy(1);
        thisMember.setModifiedBy(1);
        thisMember.insert(db);
    }
}

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From source file:org.bdval.util.RewriteModelConditions.java

/**
 * Process the command line, read the input file, write the output file.
 *
 * @param args the command line arguments
 * @throws JSAPException problem parsing the command line
 * @throws IOException   problem read/writing the files
 *///  ww w. j  a  v  a  2s.  c o  m
@SuppressWarnings("unchecked")
private void process(final String[] args) throws JSAPException, IOException {
    if (!processCommandLine(args)) {
        return;
    }

    final File inputFile = new File(inputFilename);
    if (!inputFile.exists()) {
        return;
    }
    final File outputFile = new File(outputFilename);
    if (outputFile.exists()) {
        // This file CANNOT be appended to!
        outputFile.delete();
    }
    final PrintWriter outputWriter = new PrintWriter(new FileWriter(outputFile));

    final List<String> lines = FileUtils.readLines(new File(inputFilename));
    final List<String> columns = new LinkedList<String>();
    for (final String line : lines) {
        final LinkedHashMap<String, String> data = readData(line);
        for (final String column : sortColumns(data.keySet())) {
            if (!columns.contains(column)) {
                columns.add(column);
            }
        }
    }
    writeHeaders(outputWriter, columns);
    for (final String line : lines) {
        final LinkedHashMap<String, String> data = readData(line);
        writeData(outputWriter, columns, data);
    }
    outputWriter.flush();
    IOUtils.closeQuietly(outputWriter);
}

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From source file:com.amalto.workbench.actions.XSDSetAnnotationDescriptionsAction.java

public IStatus doAction() {
    try {//from w  w  w .  j  a v a 2 s  .  co m

        IStructuredSelection selection = (TreeSelection) page.getTreeViewer().getSelection();
        XSDComponent xSDCom = null;
        if (selection.getFirstElement() instanceof Element) {
            TreePath tPath = ((TreeSelection) selection).getPaths()[0];
            for (int i = 0; i < tPath.getSegmentCount(); i++) {
                if (tPath.getSegment(i) instanceof XSDAnnotation)
                    xSDCom = (XSDAnnotation) (tPath.getSegment(i));
            }
        } else
            xSDCom = (XSDComponent) selection.getFirstElement();
        XSDAnnotationsStructure struc = new XSDAnnotationsStructure(xSDCom);
        if (struc.getAnnotation() == null) {
            throw new RuntimeException(
                    Messages.bind(Messages.XSDSetAnnotationXX_ExceptionInfo2, xSDCom.getClass().getName()));
        }

        AnnotationLanguageLabelsDialog dlg = new AnnotationLanguageLabelsDialog(struc.getDescriptions(),
                new AnnotationLabelDialogSelectionListener(page), page.getEditorSite().getShell(),
                Messages.XSDSetAnnotationXX_SetDescOfThisItem);
        dlg.setBlockOnOpen(true);
        dlg.open();

        if (dlg.getReturnCode() == Window.OK) {
            // remove existing annotations with labels
            struc.removeAllDescriptions();
            // add the new ones
            LinkedHashMap<String, String> descriptions = dlg.getDescriptionsMap();
            Set<String> isoCodes = descriptions.keySet();
            for (Iterator iter = isoCodes.iterator(); iter.hasNext();) {
                String isoCode = (String) iter.next();
                struc.setDescription(isoCode, descriptions.get(isoCode));
            }
        } else {
            return Status.CANCEL_STATUS;
        }

        if (struc.hasChanged()) {
            page.markDirty();
            page.refresh();
            page.getTreeViewer().expandToLevel(xSDCom, 2);
        }

    } catch (Exception e) {
        log.error(e.getMessage(), e);
        MessageDialog.openError(page.getSite().getShell(), Messages._Error,
                Messages.bind(Messages.XSDSetAnnotationXX_ErrorMsg, e.getLocalizedMessage()));
        return Status.CANCEL_STATUS;
    }

    return Status.OK_STATUS;
}

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