Example usage for java.util Collection addAll

Introduction

In this page you can find the example usage for java.util Collection addAll.

Prototype

boolean addAll(Collection<? extends E> c);

Source Link

Document

Adds all of the elements in the specified collection to this collection (optional operation).

Usage

From source file:com.datos.vfs.provider.tar.TarFileSystem.java

/**
 * Returns the capabilities of this file system.
 *//*w w  w .ja v a2 s  .  co m*/
@Override
protected void addCapabilities(final Collection<Capability> caps) {
    caps.addAll(TarFileProvider.capabilities);
}

From source file:eu.java.pg.jsonb.types.JSONBUserType.java

@SuppressWarnings("unchecked")
@Override/*from w  ww .j a va 2  s .  co m*/
public Object deepCopy(Object value) throws HibernateException {

    if (!(value instanceof Collection)) {
        return value;
    }

    Collection<?> collection = (Collection) value;
    Collection collectionClone = CollectionFactory.newInstance(collection.getClass());

    collectionClone.addAll(collection.stream().map(this::deepCopy).collect(Collectors.toList()));

    return collectionClone;
}

From source file:com.smash.revolance.ui.comparator.element.ElementMatchMaker.java

@Override
public Collection<ElementMatch> findMatch(Collection<ElementBean> elements, ElementBean element,
        ElementSearchMethod... methods) throws NoMatchFound, IllegalArgumentException {
    if (elements == null) {
        throw new IllegalArgumentException("Null content cannot be parsed");
    }// w  w  w  .j  a va  2 s . c  om
    if (element == null) {
        throw new IllegalArgumentException("Null element cannot be matched.");
    }
    if (elements.isEmpty()) {
        throw new NoMatchFound("Unable to find a single match. Empty element collection passed in.");
    }

    Collection<ElementBean> localElements = new ArrayList<ElementBean>();
    localElements.addAll(elements);
    if (localElements.contains(element)) {
        localElements.remove(element);
    }

    List<ElementMatch> matches = getElementMatches(element, localElements, methods);

    if (matches.isEmpty()) {
        throw new NoMatchFound("Unable to find a single match.");
    } else {
        return matches;
    }
}

From source file:cn.guoyukun.spring.jpa.repository.hibernate.type.CollectionToStringUserType.java

/**
 * ???//from  w  w  w  . j a  v a2 s  .c om
 * 
 * nullSafeGet?????
 * deepCopy????
 * ??
 * deepCopy?Hibernate?
 * ??????Hibernate???
 * equals???equalsfalse??
 *
 * @param o
 * @return
 * @throws org.hibernate.HibernateException
 */
@Override
public Object deepCopy(Object o) throws HibernateException {
    if (o == null)
        return null;
    Collection copyCollection = newCollection();
    copyCollection.addAll((Collection) o);
    return copyCollection;
}

From source file:functionaltests.TestXMLTransformer.java

@org.junit.Test
public void run() throws Throwable {

    File folder = new File(jobDescriptorsFolder.toURI());
    File[] testJobDescrFiles = folder.listFiles();

    File samplesJobDescrFiles = new File(System.getProperty("pa.scheduler.home") + File.separator + "samples"
            + File.separator + "jobs_descriptors");

    System.out.println(samplesJobDescrFiles.getAbsolutePath());

    Collection<File> samples = FileUtils.listFiles(samplesJobDescrFiles, new String[] { "xml" }, true);

    samples.addAll(Arrays.asList(testJobDescrFiles));

    System.out.println("Treating " + samples.size() + " job descriptors.");

    for (File file : samples) {
        try {//from  w  ww  .j a  va2s.co m
            transformAndCompare(file);
        } catch (Exception e) {
            throw new Exception("An exception occured while treating the file " + file.getAbsolutePath(), e);
        }

    }
}

From source file:net.ontopia.topicmaps.query.parser.NotClause.java

@Override
public Collection getAllVariables() {
    Collection vars = new HashSet();

    for (int ix = 0; ix < clauses.size(); ix++) {
        AbstractClause clause = (AbstractClause) clauses.get(ix);
        vars.addAll(clause.getAllVariables());
    }//  ww  w .  j  a  va  2s .  c  om

    return vars;
}

From source file:chibi.gemmaanalysis.GeneExpressionProfileWriterCLI.java

@Override
protected Exception doWork(String[] args) {
    processCommandLine(args);//from w ww  . j a  va  2  s .co m

    Collection<Gene> genes;
    try {
        genes = getQueryGenes();
    } catch (IOException e) {
        return e;
    }

    FilterConfig filterConfig = new FilterConfig();
    for (BioAssaySet bas : this.expressionExperiments) {
        ExpressionExperiment ee = (ExpressionExperiment) bas;
        Collection<ArrayDesign> ads = eeService.getArrayDesignsUsed(ee);
        Collection<CompositeSequence> css = new HashSet<CompositeSequence>();
        for (ArrayDesign ad : ads) {
            css.addAll(adService.getCompositeSequences(ad));
        }
        Map<Gene, Collection<CompositeSequence>> gene2css = coexpAnalysisService.getGene2CsMap(css);
        ExpressionDataDoubleMatrix dataMatrix = coexpAnalysisService.getExpressionDataMatrix(ee, filterConfig);
        String fileName = outFilePrefix + "." + ee.getShortName() + ".txt";
        try (PrintWriter out = new PrintWriter(new FileWriter(fileName));) {
            for (Gene gene : genes) {
                Collection<CompositeSequence> c = gene2css.get(gene);
                for (CompositeSequence cs : c) {
                    Double[] row = dataMatrix.getRow(cs);
                    if (row == null) {
                        log.error("Cannot get data from data matrix for " + gene.getOfficialSymbol() + " ("
                                + cs.getName() + ")");
                        continue;
                    }
                    StringBuffer buf = new StringBuffer();
                    buf.append(gene.getOfficialSymbol() + "\t" + cs.getName() + "\t");
                    for (Double d : row) {
                        if (d == null)
                            buf.append("NaN");
                        else
                            buf.append(d);
                        buf.append("\t");
                    }
                    buf.deleteCharAt(buf.length() - 1);
                    out.println(buf.toString());
                }
            }

        } catch (IOException e) {
            return e;
        }
    }

    return null;
}

From source file:net.ontopia.topicmaps.query.parser.NotClause.java

@Override
public List getArguments() {
    Collection items = new HashSet();

    for (int ix = 0; ix < clauses.size(); ix++) {
        AbstractClause clause = (AbstractClause) clauses.get(ix);
        items.addAll(clause.getArguments());
    }/*from  w ww. ja  v  a 2 s  .  c o  m*/

    List list = new ArrayList();
    list.addAll(items);
    return list;
}

From source file:com.sworddance.util.CUtilities.java

@SuppressWarnings("unchecked")
public static <T extends Collection<?>> T cloneCollection(T cloned) {
    Collection result = null;
    if (cloned != null) {
        try {/*from  ww w  .  j  ava  2s .c  om*/
            result = cloned.getClass().newInstance();
        } catch (InstantiationException e) {
            throw new ApplicationGeneralException(e);
        } catch (IllegalAccessException e) {
            throw new ApplicationGeneralException(e);
        }
        result.addAll(cloned);
    }
    return (T) result;
}

From source file:net.ontopia.topicmaps.query.parser.NotClause.java

@Override
public Collection getAllLiterals() {
    Collection literals = new HashSet();

    for (int ix = 0; ix < clauses.size(); ix++) {
        AbstractClause clause = (AbstractClause) clauses.get(ix);
        literals.addAll(clause.getAllLiterals());
    }//from   w ww  . jav a  2 s .  c  o m

    return literals;
}