Example usage for java.util Arrays asList

Introduction

In this page you can find the example usage for java.util Arrays asList.

Prototype

@SafeVarargs
@SuppressWarnings("varargs")
public static <T> List<T> asList(T... a) 

Source Link

Document

Returns a fixed-size list backed by the specified array.

Usage

From source file:cz.muni.fi.mir.mathmlunificator.MathMLUnificatorCommandLineTool.java

/**
 * Main (starting) method of the command line application.
 *
 * @param argv Array of command line arguments that are expected to be
 * filesystem paths to input XML documents with MathML to be unified.
 * @throws ParserConfigurationException If a XML DOM builder cannot be
 * created with the configuration requested.
 *///from  w  w  w.  j  a va 2s  .c  o  m
public static void main(String argv[]) throws ParserConfigurationException {

    final Options options = new Options();
    options.addOption("p", "operator-unification", false, "unify operator in addition to other types of nodes");
    options.addOption("h", "help", false, "print help");

    final CommandLineParser parser = new DefaultParser();
    CommandLine line = null;
    try {
        line = parser.parse(options, argv);
    } catch (ParseException ex) {
        printHelp(options);
        System.exit(1);
    }

    if (line != null) {
        if (line.hasOption('h')) {
            printHelp(options);
            System.exit(0);
        }
        operatorUnification = line.hasOption('p');

        final List<String> arguments = Arrays.asList(line.getArgs());
        if (arguments.size() > 0) {

            Document outerDocument = DOMBuilder.getDocumentBuilder().newDocument();
            Node rootNode = outerDocument.createElementNS(UNIFIED_MATHML_NS,
                    UNIFIED_MATHML_NS_PREFIX + ":" + UNIFIED_MATHML_BATCH_OUTPUT_ROOT_ELEM);
            outerDocument.appendChild(rootNode);

            for (String filepath : arguments) {
                try {

                    Document doc = DOMBuilder.buildDocFromFilepath(filepath);
                    MathMLUnificator.unifyMathML(doc, operatorUnification);
                    if (arguments.size() == 1) {
                        xmlStdoutSerializer(doc);
                    } else {
                        Node itemNode = rootNode.getOwnerDocument().createElementNS(UNIFIED_MATHML_NS,
                                UNIFIED_MATHML_NS_PREFIX + ":" + UNIFIED_MATHML_BATCH_OUTPUT_ITEM_ELEM);
                        Attr filenameAttr = itemNode.getOwnerDocument().createAttributeNS(UNIFIED_MATHML_NS,
                                UNIFIED_MATHML_NS_PREFIX + ":"
                                        + UNIFIED_MATHML_BATCH_OUTPUT_ITEM_FILEPATH_ATTR);
                        filenameAttr.setTextContent(String.valueOf(filepath));
                        ((Element) itemNode).setAttributeNodeNS(filenameAttr);
                        itemNode.appendChild(
                                rootNode.getOwnerDocument().importNode(doc.getDocumentElement(), true));
                        rootNode.appendChild(itemNode);

                    }

                } catch (SAXException | IOException ex) {
                    Logger.getLogger(MathMLUnificatorCommandLineTool.class.getName()).log(Level.SEVERE,
                            "Failed processing of file: " + filepath, ex);
                }
            }

            if (rootNode.getChildNodes().getLength() > 0) {
                xmlStdoutSerializer(rootNode.getOwnerDocument());
            }

        } else {
            printHelp(options);
            System.exit(0);
        }
    }

}

---

From source file:edu.scripps.fl.pubchem.app.AssayDownloader.java

public static void main(String[] args) throws Exception {
    CommandLineHandler clh = new CommandLineHandler() {
        public void configureOptions(Options options) {
            options.addOption(OptionBuilder.withLongOpt("data_url").withType("").withValueSeparator('=')
                    .hasArg().create());
            options.addOption(//  ww  w.j  av a  2s .co  m
                    OptionBuilder.withLongOpt("days").withType(0).withValueSeparator('=').hasArg().create());
            options.addOption(OptionBuilder.withLongOpt("mlpcn").withType(false).create());
            options.addOption(OptionBuilder.withLongOpt("notInDb").withType(false).create());
        }
    };
    args = clh.handle(args);
    String data_url = clh.getCommandLine().getOptionValue("data_url");
    if (null == data_url)
        data_url = "ftp://ftp.ncbi.nlm.nih.gov/pubchem/Bioassay/CSV/";
    //         data_url = "file:///C:/Home/temp/PubChemFTP/";

    AssayDownloader main = new AssayDownloader();
    main.dataUrl = new URL(data_url);

    if (clh.getCommandLine().hasOption("days"))
        main.days = Integer.parseInt(clh.getCommandLine().getOptionValue("days"));
    if (clh.getCommandLine().hasOption("mlpcn"))
        main.mlpcn = true;
    if (clh.getCommandLine().hasOption("notInDb"))
        main.notInDb = true;

    if (args.length == 0)
        main.process();
    else {
        Long[] list = (Long[]) ConvertUtils.convert(args, Long[].class);
        List<Long> l = (List<Long>) Arrays.asList(list);
        log.info("AID to process: " + l);
        main.process(new HashSet<Long>(Arrays.asList(list)));
    }
}

---

From source file:fr.ens.biologie.genomique.toullig.Main.java

/**
 * The main function parse the options of the command line
 */// w  ww .  java2s.c  o m
public static void main(String[] args) {

    // make options
    final Options options = makeOptions();

    // make parser of the command line
    final CommandLineParser parser = new GnuParser();

    try {

        // parse the command line arguments
        final CommandLine line = parser.parse(options, args, true);

        // test if no arguments is given
        if (args.length == 0) {

            showErrorMessageAndExit(
                    "ERROR: Toullig need in the first argument the tool what you want use!\nSee the help with "
                            + Globals.APP_NAME_LOWER_CASE + ".sh -h, --help\n");

        }

        // display help
        if (line.hasOption("help")) {
            help();
        }

        // About option
        if (line.hasOption("about")) {
            Common.showMessageAndExit(Globals.ABOUT_TXT);
        }

        // Version option
        if (line.hasOption("version")) {
            Common.showMessageAndExit(Globals.WELCOME_MSG);
        }

        // Licence option
        if (line.hasOption("license")) {
            Common.showMessageAndExit(Globals.LICENSE_TXT);
        }

        String mode = args[0];

        switch (mode) {

        // process fast5tofastq module
        case "fast5tofastq":

            new Fast5tofastqAction().action(new ArrayList<>(Arrays.asList(args)).subList(1, args.length));

            break;

        // display help
        default:

            showMessageAndExit("ERROR: The name of the tool is not correct!\nSee the help with "
                    + Globals.APP_NAME_LOWER_CASE + ".sh -h, --help\n");

            break;

        // process trim module
        case "trim":

            new TrimAction().action(new ArrayList<>(Arrays.asList(args)).subList(1, args.length));

            break;

        // process gtftogpd module
        case "gtftogpd":

            new GtftogpdAction().action(new ArrayList<>(Arrays.asList(args)).subList(1, args.length));

            break;

        // // process test module
        // case "test":
        // new SamDiffAnnot();
        // break;

        }
    } catch (ParseException e) {
        e.printStackTrace();
    }
}

---

From source file:cn.webank.ecif.index.server.EcifIndexServer.java

/**
 * @param args//from  ww  w  .  jav  a2  s .c o  m
 */
public static void main(String[] args) {
    final EcifIndexServer server = new EcifIndexServer();
    // start spring context;
    final ClassPathXmlApplicationContext context = new ClassPathXmlApplicationContext();

    context.getEnvironment().setActiveProfiles("product");
    context.setConfigLocation("application.xml");
    context.refresh();
    context.start();

    // thread pool construct
    ThreadPoolTaskExecutor taskThreadPool = context.getBean("taskExecutor", ThreadPoolTaskExecutor.class);

    server.setTaskThreadPool(taskThreadPool);

    ExecutorService fixedThreadPool = context.getBean("fixedTaskExecutor", ExecutorService.class);

    server.setSchedulerThreadPool(fixedThreadPool);

    EcifThreadFactory threadFactory = context.getBean("cn.webank.ecif.index.async.EcifThreadFactory",
            EcifThreadFactory.class);

    server.setThreadFactory(threadFactory);

    Properties props = context.getBean("ecifProperties", java.util.Properties.class);

    WeBankServiceDispatcher serviceDispatcher = context.getBean(
            "cn.webank.framework.biz.service.support.WeBankServiceDispatcher", WeBankServiceDispatcher.class);

    ReloadableResourceBundleMessageSource bundleMessageSource = context.getBean("messageSource",
            ReloadableResourceBundleMessageSource.class);

    String topics = props.getProperty("listener.topics");
    String[] splits = topics.split(",");

    SolaceManager solaceManager = context.getBean("cn.webank.framework.message.SolaceManager",
            SolaceManager.class);
    MessageListener messageLisener = new MessageListener(
            // props.getProperty("listener.queue"),
            Arrays.asList(splits), Integer.parseInt(props.getProperty("listener.scanintervalseconds", "5")),
            taskThreadPool, Integer.parseInt(props.getProperty("listener.timeoutseconds", "5")),
            serviceDispatcher, solaceManager, bundleMessageSource);
    server.addListenerOnSchedule(messageLisener);

    // register shutdownhook
    Runtime.getRuntime().addShutdownHook(new Thread() {
        public void run() {
            try {
                // close resource
                if (context != null) {
                    context.close();
                }

            } catch (Exception e) {
                LOG.error("shutdown error", e);
            }
        }
    });

    // hold server
    try {
        LOG.info("ecif-index server start ok!");
        server.start();
    } catch (Exception e) {
        try {
            // close resource
            server.shutDown();
            if (context != null) {
                context.close();
            }

        } catch (Exception ex) {
            LOG.error("shutdown error", ex);
        }
    }

    LOG.info("ecif-index server stop !");
}

---

From source file:com.slothpetrochemical.bridgeprob.BridgeProblemApp.java

public static void main(final String[] args) throws ParseException {
    Options commandLineOptions = createOptions();
    PosixParser clParser = new PosixParser();
    CommandLine cl = clParser.parse(commandLineOptions, args);

    if (cl.getArgs().length == 0 || cl.hasOption("h")) {
        new HelpFormatter().printHelp("crossing_times...", commandLineOptions);
    } else {/*from   w  ww  .  j  ava2s  .com*/
        String[] clArgs = cl.getArgs();
        Integer[] times = new Integer[clArgs.length];
        for (int i = 0; i < clArgs.length; ++i) {
            Integer intTime = Integer.parseInt(clArgs[i]);
            times[i] = intTime;
        }
        Arrays.sort(times);
        BridgeProblemApp app = new BridgeProblemApp(Arrays.asList(times));
        app.run();
    }
}

---

From source file:org.hbz.oerworldmap.NtToEs.java

public static void main(String... args) throws FileNotFoundException, IOException {
    if (args.length != 1 && args.length != 2) {
        System.out.println("Pass the root directory to crawl. "
                + "Will recursively gather all content from *.nt "
                + "files with identical names, convert these to " + "compact JSON-LD and index it in ES. "
                + "If a second argument is passed it is processed " + "as a TSV file that maps file names (w/o "
                + "extensions) to IDs to be used for ES. Else the " + "file names (w/o extensions) are used.");
        args = new String[] { "output", "src/main/resources/internalId2uuid.tsv" };
        System.out.println("Using defaults: " + Arrays.asList(args));
    }//ww  w  . j a v a  2s  .  c o  m
    if (args.length == 2)
        initMap(args[1]);
    TripleCrawler crawler = new TripleCrawler();
    Files.walkFileTree(Paths.get(args[0]), crawler);
    createIndex(config(), INDEX);
    process(crawler.data);
}

---

From source file:hydrograph.server.execution.tracking.client.main.HydrographMain.java

/**
 * The main method.//from   w  ww  . ja  v  a  2 s. c  o m
 *
 * @param args
 *            the arguments
 * @throws Exception
 *             the exception
 */
public static void main(String[] args) throws Exception {

    HydrographMain hydrographMain = new HydrographMain();
    final Timer timer = new Timer();
    final CountDownLatch latch = new CountDownLatch(1);
    try {
        Session session = null;
        boolean isExecutionTracking = false;
        String[] argsList = args;
        List<String> argumentList = new ArrayList<String>(Arrays.asList(args));
        final String jobId = hydrographMain.getJobId(argumentList);

        getLogLevel(argumentList).ifPresent(x -> {
            if (!x.equalsIgnoreCase(String.valueOf(logger.getLevel()))) {
                setLoglevel(x);
            } else {
                Optional.empty();
            }

        });

        logger.info("Argument List: " + argumentList.toString());

        String trackingClientSocketPort = hydrographMain.getTrackingClientSocketPort(argumentList);

        if (argumentList.contains(Constants.IS_TRACKING_ENABLE)) {
            int index = argumentList.indexOf(Constants.IS_TRACKING_ENABLE);
            isExecutionTracking = Boolean.valueOf(argsList[index + 1]);
            argumentList = removeItemFromIndex(index, argumentList);
        }

        if (argumentList.contains(Constants.TRACKING_CLIENT_SOCKET_PORT)) {
            int index = argumentList.indexOf(Constants.TRACKING_CLIENT_SOCKET_PORT);
            argumentList = removeItemFromIndex(index, argumentList);
        }

        argsList = argumentList.toArray(new String[argumentList.size()]);

        logger.debug("Execution tracking enabled - " + isExecutionTracking);
        logger.info("Tracking Client Port: " + trackingClientSocketPort);

        /**
         * Start new thread to run job
         */
        final HydrographService execution = new HydrographService();

        FutureTask task = hydrographMain.executeGraph(latch, jobId, argsList, execution, isExecutionTracking);

        hydrographMain.executorService = Executors.newSingleThreadExecutor();
        hydrographMain.executorService.submit(task);

        if (isExecutionTracking) {
            //If tracking is enabled, start to post execution tracking status.
            final HydrographEngineCommunicatorSocket socket = new HydrographEngineCommunicatorSocket(execution);
            session = hydrographMain.connectToServer(socket, jobId, trackingClientSocketPort);
            hydrographMain.sendExecutionTrackingStatus(latch, session, jobId, timer, execution, socket);
        }

        //waiting for execute graph thread 
        task.get();

    } catch (Exception exp) {
        logger.info("Getting exception from HydrographMain");
        throw new RuntimeException(exp);
    } finally {
        //cleanup threads --> executor thread and timer thread 
        logger.info("HydrographMain releasing resources");
        if (!hydrographMain.executorService.isShutdown() && !hydrographMain.executorService.isTerminated()) {
            hydrographMain.executorService.shutdown();
        }
        timer.cancel();

    }
}

---

From source file:MailHandlerDemo.java

/**
 * Runs the demo.//w w  w  .  ja v  a  2s  .  c o m
 *
 * @param args the command line arguments
 * @throws IOException if there is a problem.
 */
public static void main(String[] args) throws IOException {
    List<String> l = Arrays.asList(args);
    if (l.contains("/?") || l.contains("-?") || l.contains("-help")) {
        LOGGER.info("Usage: java MailHandlerDemo " + "[[-all] | [-body] | [-custom] | [-debug] | [-low] "
                + "| [-simple] | [-pushlevel] | [-pushfilter] " + "| [-pushnormal] | [-pushonly]] " + "\n\n"
                + "-all\t\t: Execute all demos.\n" + "-body\t\t: An email with all records and only a body.\n"
                + "-custom\t\t: An email with attachments and dynamic names.\n"
                + "-debug\t\t: Output basic debug information about the JVM " + "and log configuration.\n"
                + "-low\t\t: Generates multiple emails due to low capacity." + "\n"
                + "-simple\t\t: An email with all records with body and " + "an attachment.\n"
                + "-pushlevel\t: Generates high priority emails when the"
                + " push level is triggered and normal priority when " + "flushed.\n"
                + "-pushFilter\t: Generates high priority emails when the "
                + "push level and the push filter is triggered and normal " + "priority emails when flushed.\n"
                + "-pushnormal\t: Generates multiple emails when the "
                + "MemoryHandler push level is triggered.  All generated "
                + "email are sent as normal priority.\n" + "-pushonly\t: Generates multiple emails when the "
                + "MemoryHandler push level is triggered.  Generates high "
                + "priority emails when the push level is triggered and " + "normal priority when flushed.\n");
    } else {
        final boolean debug = init(l); //may create log messages.
        try {
            LOGGER.log(Level.FINEST, "This is the finest part of the demo.",
                    new MessagingException("Fake JavaMail issue."));
            LOGGER.log(Level.FINER, "This is the finer part of the demo.",
                    new NullPointerException("Fake bug."));
            LOGGER.log(Level.FINE, "This is the fine part of the demo.");
            LOGGER.log(Level.CONFIG, "Logging config file is {0}.", getConfigLocation());
            LOGGER.log(Level.INFO, "Your temp directory is {0}, " + "please wait...", getTempDir());

            try { //Waste some time for the custom formatter.
                Thread.sleep(3L * 1000L);
            } catch (InterruptedException ex) {
                Thread.currentThread().interrupt();
            }

            LOGGER.log(Level.WARNING, "This is a warning.",
                    new FileNotFoundException("Fake file chooser issue."));
            LOGGER.log(Level.SEVERE, "The end of the demo.", new IOException("Fake access denied issue."));
        } finally {
            closeHandlers();
        }

        //Force parse errors.  This does have side effects.
        if (debug && getConfigLocation() != null) {
            LogManager.getLogManager().readConfiguration();
        }
    }
}

---

From source file:org.dasein.cloud.google.HttpsConnection.java

public static void main(String[] args) throws Exception {
    JSONArray a = new JSONArray(
            Arrays.asList(getJSON("676516473943-jt3udkrj247hvsuh1nrfivr5cfn84uio@developer.gserviceaccount.com",
                    "D:\\GCE-privatekey.p12")));
    System.out.println("Array : " + a.toString());

}

---

From source file:com.dattack.dbcopy.cli.DbCopyCli.java

/**
 * The <code>main</code> method.
 *
 * @param args//ww w  .j  av  a  2 s . c o  m
 *            the program arguments
 */
public static void main(final String[] args) {

    final Options options = createOptions();

    try {
        final CommandLineParser parser = new DefaultParser();
        final CommandLine cmd = parser.parse(options, args);
        final String[] filenames = cmd.getOptionValues(FILE_OPTION);
        final String[] jobNames = cmd.getOptionValues(JOB_NAME_OPTION);
        final String[] propertiesFiles = cmd.getOptionValues(PROPERTIES_OPTION);

        HashSet<String> jobNameSet = null;
        if (jobNames != null) {
            jobNameSet = new HashSet<>(Arrays.asList(jobNames));
        }

        CompositeConfiguration configuration = new CompositeConfiguration();
        if (propertiesFiles != null) {
            for (final String fileName : propertiesFiles) {
                configuration.addConfiguration(new PropertiesConfiguration(fileName));
            }
        }

        final DbCopyEngine ping = new DbCopyEngine();
        ping.execute(filenames, jobNameSet, configuration);

    } catch (@SuppressWarnings("unused") final ParseException e) {
        showUsage(options);
    } catch (final ConfigurationException | DattackParserException e) {
        System.err.println(e.getMessage());
    }
}

---

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