Example usage for java.nio.file Path toFile

Introduction

In this page you can find the example usage for java.nio.file Path toFile.

Prototype

default File toFile() 

Source Link

Document

Returns a File object representing this path.

Usage

From source file:com.marklogic.entityservices.e2e.CSVLoader.java

public void go() throws InterruptedException {

    logger.info("job started.");

    File dir = new File(projectDir + "/data/superstore-csv");

    WriteHostBatcher batcher = moveMgr.newWriteHostBatcher().withBatchSize(100).withThreadCount(10)
            .onBatchSuccess((client, batch) -> logger.info(getSummaryReport(batch)))
            .onBatchFailure((client, batch, throwable) -> {
                logger.warn("FAILURE on batch:" + batch.toString() + "\n", throwable);
                throwable.printStackTrace();
            });/*from   w ww.j av  a  2s .  c  om*/

    ticket = moveMgr.startJob(batcher);

    try (DirectoryStream<Path> stream = Files.newDirectoryStream(dir.toPath(), "*.csv")) {
        for (Path entry : stream) {
            logger.debug("Adding " + entry.getFileName().toString());

            MappingIterator<ObjectNode> it = csvMapper.readerFor(ObjectNode.class).with(bootstrapSchema)
                    .readValues(entry.toFile());
            long i = 0;
            while (it.hasNext()) {
                ObjectNode jsonNode = it.next();
                String jsonString = mapper.writeValueAsString(jsonNode);

                String uri = entry.toUri().toString() + "-" + Long.toString(i++) + ".json";
                DocumentMetadataHandle metadata = new DocumentMetadataHandle() //
                        .withCollections("raw", "csv") //
                        .withPermission("nwind-reader", Capability.READ) //
                        .withPermission("nwind-writer", Capability.INSERT, Capability.UPDATE);
                batcher.add(uri, metadata, new StringHandle(jsonString));
                if (i % 1000 == 0)
                    logger.debug("Inserting JSON document " + uri);
            }
            it.close();
        }
    }

    catch (IOException e)

    {
        e.printStackTrace();
    }

    batcher.flush();
}

---

From source file:com.marklogic.entityservices.examples.CSVLoader.java

public void go() throws InterruptedException {

    logger.info("job started.");

    File dir = new File(projectDir + "/data/third-party/csv");

    WriteHostBatcher batcher = moveMgr.newWriteHostBatcher().withBatchSize(100).withThreadCount(10)
            .onBatchSuccess((client, batch) -> logger.info(getSummaryReport(batch)))
            .onBatchFailure((client, batch, throwable) -> {
                logger.warn("FAILURE on batch:" + batch.toString() + "\n", throwable);
                throwable.printStackTrace();
            });/*  w w w  . j a va 2s  . c o  m*/

    ticket = moveMgr.startJob(batcher);

    try (DirectoryStream<Path> stream = Files.newDirectoryStream(dir.toPath(), "*.csv")) {
        for (Path entry : stream) {
            logger.debug("Adding " + entry.getFileName().toString());

            MappingIterator<ObjectNode> it = csvMapper.readerFor(ObjectNode.class).with(bootstrapSchema)
                    .readValues(entry.toFile());
            long i = 0;
            while (it.hasNext()) {
                ObjectNode jsonNode = it.next();
                String jsonString = mapper.writeValueAsString(jsonNode);

                String uri = entry.toUri().toString() + "-" + Long.toString(i++) + ".json";
                DocumentMetadataHandle metadata = new DocumentMetadataHandle() //
                        .withCollections("raw", "csv") //
                        .withPermission("race-reader", Capability.READ) //
                        .withPermission("race-writer", Capability.INSERT, Capability.UPDATE);
                batcher.add(uri, metadata, new StringHandle(jsonString));
                if (i % 1000 == 0)
                    logger.debug("Inserting JSON document " + uri);
            }
            it.close();
        }
    }

    catch (IOException e)

    {
        e.printStackTrace();
    }

    batcher.flush();
}

---

From source file:at.tfr.securefs.module.validation.SchemaValidationModule.java

protected void loadSchema(ModuleConfiguration moduleConfig) {
    try {//from   www. j  a v a  2  s.  c om
        String moduleSchemaName = moduleConfig.getProperties().getProperty("schemaName");
        if (StringUtils.isNoneBlank(moduleSchemaName) && !schemaName.equals(moduleSchemaName)) {
            schemaName = moduleSchemaName;
            schema = null;
        }
        if (schema == null) {
            Path schemaPath = configuration.getSchemaPath().resolve(schemaName);
            schema = SchemaFactory.newInstance("http://www.w3.org/2001/XMLSchema")
                    .newSchema(schemaPath.toFile());
            log.info("loaded schema: " + schemaPath);
        }
    } catch (Exception e) {
        String message = "cannot load schema " + schemaName + " from path: " + configuration.getSchemaPath();
        log.warn(message, e);
    }
}

---

From source file:com.textocat.textokit.commons.consumer.XmiFileWriter.java

@Override
protected OutputStream getOutputStream(DocumentMetadata meta) throws IOException {
    Path outRelativePath = outPathFunc.apply(meta);
    Path resultPath = outBasePath.resolve(outRelativePath);
    resultPath = IoUtils.addExtension(resultPath, XMI_FILE_EXTENSION);
    // does not create missing parents
    // return Files.newOutputStream(resultPath);
    return FileUtils.openOutputStream(resultPath.toFile());
}

---

From source file:be.ugent.psb.coexpnetviz.io.JobServer.java

private HttpEntity makeRequestEntity(JobDescription job) throws UnsupportedEncodingException {

    MultipartEntityBuilder entityBuilder = MultipartEntityBuilder.create();

    // Action to request of server
    entityBuilder.addTextBody("__controller", "api");
    entityBuilder.addTextBody("__action", "execute_job");

    // Baits //  w  ww.  j a  v  a 2s . com
    if (job.getBaitGroupSource() == BaitGroupSource.FILE) {
        entityBuilder.addBinaryBody("baits_file", job.getBaitGroupPath().toFile(), ContentType.TEXT_PLAIN,
                job.getBaitGroupPath().getFileName().toString());
    } else if (job.getBaitGroupSource() == BaitGroupSource.TEXT) {
        entityBuilder.addTextBody("baits", job.getBaitGroupText());
    } else {
        assert false;
    }

    // Expression matrices
    for (Path path : job.getExpressionMatrixPaths()) {
        entityBuilder.addBinaryBody("matrix[]", path.toFile(), ContentType.TEXT_PLAIN, path.toString());
    }

    // Correlation method
    String correlationMethod = null;
    if (job.getCorrelationMethod() == CorrelationMethod.MUTUAL_INFORMATION) {
        correlationMethod = "mutual_information";
    } else if (job.getCorrelationMethod() == CorrelationMethod.PEARSON) {
        correlationMethod = "pearson_r";
    } else {
        assert false;
    }
    entityBuilder.addTextBody("correlation_method", correlationMethod);

    // Cutoffs
    entityBuilder.addTextBody("lower_percentile_rank", Double.toString(job.getLowerPercentile()));
    entityBuilder.addTextBody("upper_percentile_rank", Double.toString(job.getUpperPercentile()));

    // Gene families source
    String orthologsSource = null;
    if (job.getGeneFamiliesSource() == GeneFamiliesSource.PLAZA) {
        orthologsSource = "plaza";
    } else if (job.getGeneFamiliesSource() == GeneFamiliesSource.CUSTOM) {
        orthologsSource = "custom";
        entityBuilder.addBinaryBody("gene_families", job.getGeneFamiliesPath().toFile(), ContentType.TEXT_PLAIN,
                job.getGeneFamiliesPath().getFileName().toString());
    } else if (job.getGeneFamiliesSource() == GeneFamiliesSource.NONE) {
        orthologsSource = "none";
    } else {
        assert false;
    }
    entityBuilder.addTextBody("gene_families_source", orthologsSource);

    return entityBuilder.build();
}

---

From source file:com.github.blindpirate.gogradle.crossplatform.DefaultGoBinaryManager.java

private void downloadSpecifiedVersion(String version) {
    Path archivePath = downloadArchive(version);
    CompressUtils.decompressZipOrTarGz(archivePath.toFile(),
            globalCacheManager.getGlobalGoBinCacheDir(version));
}

---

From source file:fr.duminy.jbackup.core.archive.FileCollector.java

private long collect(final List<SourceWithPath> collectedFiles, final Path source,
        final IOFileFilter directoryFilter, final IOFileFilter fileFilter, final Cancellable cancellable)
        throws IOException {
    final long[] totalSize = { 0L };

    SimpleFileVisitor<Path> visitor = new SimpleFileVisitor<Path>() {
        @Override//from ww  w  . j a  v a2s .c o m
        public FileVisitResult preVisitDirectory(Path dir, BasicFileAttributes attrs) throws IOException {
            super.preVisitDirectory(dir, attrs);
            if ((directoryFilter == null) || source.equals(dir) || directoryFilter.accept(dir.toFile())) {
                return CONTINUE;
            } else {
                return SKIP_SUBTREE;
            }
        }

        @Override
        public FileVisitResult visitFile(Path file, BasicFileAttributes attrs) throws IOException {
            if ((cancellable != null) && cancellable.isCancelled()) {
                return TERMINATE;
            }

            super.visitFile(file, attrs);

            if (!Files.isSymbolicLink(file)) {
                if ((fileFilter == null) || fileFilter.accept(file.toFile())) {
                    LOG.trace("visitFile {}", file.toAbsolutePath());
                    collectedFiles.add(new SourceWithPath(source, file));
                    totalSize[0] += Files.size(file);
                }
            }

            return CONTINUE;
        }
    };
    Files.walkFileTree(source, visitor);

    return totalSize[0];
}

---

From source file:com.google.cloud.tools.managedcloudsdk.install.ZipExtractorProvider.java

@Override
public void extract(Path archive, Path destination, ProgressListener progressListener) throws IOException {

    progressListener.start("Extracting archive: " + archive.getFileName(), ProgressListener.UNKNOWN);

    String canonicalDestination = destination.toFile().getCanonicalPath();

    // Use ZipFile instead of ZipArchiveInputStream so that we can obtain file permissions
    // on unix-like systems via getUnixMode(). ZipArchiveInputStream doesn't have access to
    // all the zip file data and will return "0" for any call to getUnixMode().
    try (ZipFile zipFile = new ZipFile(archive.toFile())) {
        // TextProgressBar progressBar = textBarFactory.newProgressBar(messageListener, count);
        Enumeration<ZipArchiveEntry> zipEntries = zipFile.getEntries();
        while (zipEntries.hasMoreElements()) {
            ZipArchiveEntry entry = zipEntries.nextElement();
            Path entryTarget = destination.resolve(entry.getName());

            String canonicalTarget = entryTarget.toFile().getCanonicalPath();
            if (!canonicalTarget.startsWith(canonicalDestination + File.separator)) {
                throw new IOException("Blocked unzipping files outside destination: " + entry.getName());
            }/*from   w  ww  .j  a  va 2 s  . c om*/

            progressListener.update(1);
            logger.fine(entryTarget.toString());

            if (entry.isDirectory()) {
                if (!Files.exists(entryTarget)) {
                    Files.createDirectories(entryTarget);
                }
            } else {
                if (!Files.exists(entryTarget.getParent())) {
                    Files.createDirectories(entryTarget.getParent());
                }
                try (OutputStream out = new BufferedOutputStream(Files.newOutputStream(entryTarget))) {
                    try (InputStream in = zipFile.getInputStream(entry)) {
                        IOUtils.copy(in, out);
                        PosixFileAttributeView attributeView = Files.getFileAttributeView(entryTarget,
                                PosixFileAttributeView.class);
                        if (attributeView != null) {
                            attributeView
                                    .setPermissions(PosixUtil.getPosixFilePermissions(entry.getUnixMode()));
                        }
                    }
                }
            }
        }
    }
    progressListener.done();
}

---

From source file:com.thoughtworks.go.server.service.plugins.AnalyticsPluginAssetsServiceTest.java

@Test
public void onPluginMetadataLoad_shouldClearExistingCacheAssets() throws Exception {
    railsRoot = temporaryFolder.newFolder();
    Path pluginDirPath = Paths.get(railsRoot.getAbsolutePath(), "public", "assets", "plugins", PLUGIN_ID);

    Path dirtyPath = Paths.get(pluginDirPath.toString(), "dirty.txt");
    FileUtils.forceMkdirParent(dirtyPath.toFile());
    Files.write(dirtyPath, "hello".getBytes());

    assertTrue(pluginDirPath.toFile().exists());
    assertTrue(dirtyPath.toFile().exists());

    addAnalyticsPluginInfoToStore(PLUGIN_ID);
    when(servletContext.getInitParameter("rails.root")).thenReturn("rails-root");
    when(servletContext.getRealPath("rails-root")).thenReturn(railsRoot.getAbsolutePath());
    when(extension.canHandlePlugin(PLUGIN_ID)).thenReturn(true);
    when(extension.getStaticAssets(PLUGIN_ID)).thenReturn(null);

    assetsService.onPluginMetadataCreate(PLUGIN_ID);

    assertFalse(dirtyPath.toFile().exists());
    assertFalse(pluginDirPath.toFile().exists());
}

---

From source file:com.thoughtworks.go.server.service.plugins.AnalyticsPluginAssetsServiceTest.java

@Test
public void onPluginMetadataLoad_shouldKnowPluginStaticAssetsPath() throws Exception {
    railsRoot = temporaryFolder.newFolder();
    Path pluginDirPath = Paths.get(railsRoot.getAbsolutePath(), "public", "assets", "plugins", PLUGIN_ID);

    Path dirtyPath = Paths.get(pluginDirPath.toString(), "dirty.txt");
    FileUtils.forceMkdirParent(dirtyPath.toFile());
    Files.write(dirtyPath, "hello".getBytes());

    assertTrue(pluginDirPath.toFile().exists());
    assertTrue(dirtyPath.toFile().exists());

    addAnalyticsPluginInfoToStore(PLUGIN_ID);
    when(servletContext.getInitParameter("rails.root")).thenReturn("rails-root");
    when(servletContext.getRealPath("rails-root")).thenReturn(railsRoot.getAbsolutePath());
    when(extension.canHandlePlugin(PLUGIN_ID)).thenReturn(true);
    when(extension.getStaticAssets(PLUGIN_ID)).thenReturn(testDataZipArchive());

    assetsService.onPluginMetadataCreate(PLUGIN_ID);
    String shaHashOfZipAndPluginScript = "cfbb9309faf81a2b61277abc3b5c31486797d62b24ddfd83a2f871fc56d61ea2";
    assertEquals(Paths.get("assets", "plugins", PLUGIN_ID, shaHashOfZipAndPluginScript).toString(),
            assetsService.assetPathFor(PLUGIN_ID));
}

---

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