List of usage examples for java.nio.file Files size
public static long size(Path path) throws IOException
From source file:com.spectralogic.ds3client.integration.GetJobManagement_Test.java
@Test(expected = AccessDeniedException.class) public void testReadRetryBugFixWithUnwritableDirectory() throws IOException, URISyntaxException, NoSuchMethodException, IllegalAccessException, InvocationTargetException, InterruptedException { Assume.assumeFalse(iAmRoot());/* ww w . ja v a 2s . c o m*/ final String tempPathPrefix = null; final Path tempDirectoryPath = Files.createTempDirectory(Paths.get("."), tempPathPrefix); final String tempDirectoryName = tempDirectoryPath.toString(); if (org.apache.commons.lang3.SystemUtils.IS_OS_WINDOWS) { // Deny write data access to everyone, making the directory unwritable. Runtime.getRuntime().exec("icacls " + tempDirectoryName + " /deny Everyone:(WD)").waitFor(); } else { Runtime.getRuntime().exec("chmod -w " + tempDirectoryName).waitFor(); } try { disableWritePermissionForRoot(tempDirectoryName); final String DIR_NAME = "largeFiles/"; final String FILE_NAME = "lesmis-copies.txt"; final Path objPath = ResourceUtils.loadFileResource(DIR_NAME + FILE_NAME); final long bookSize = Files.size(objPath); final Ds3Object obj = new Ds3Object(FILE_NAME, bookSize); final Ds3ClientShim ds3ClientShim = new Ds3ClientShim((Ds3ClientImpl) client); final int maxNumBlockAllocationRetries = 1; final int maxNumObjectTransferAttempts = 3; final Ds3ClientHelpers ds3ClientHelpers = Ds3ClientHelpers.wrap(ds3ClientShim, maxNumBlockAllocationRetries, maxNumObjectTransferAttempts); final Ds3ClientHelpers.Job readJob = ds3ClientHelpers.startReadJob(BUCKET_NAME, Arrays.asList(obj)); final GetJobSpectraS3Response jobSpectraS3Response = ds3ClientShim .getJobSpectraS3(new GetJobSpectraS3Request(readJob.getJobId())); assertThat(jobSpectraS3Response.getMasterObjectListResult(), is(notNullValue())); readJob.transfer(new FileObjectGetter(tempDirectoryPath)); final File originalFile = ResourceUtils.loadFileResource(DIR_NAME + FILE_NAME).toFile(); final File fileCopiedFromBP = Paths.get(tempDirectoryPath.toString(), FILE_NAME).toFile(); assertTrue(FileUtils.contentEquals(originalFile, fileCopiedFromBP)); } finally { enableWritePermissionForRoot(tempDirectoryName); if (org.apache.commons.lang3.SystemUtils.IS_OS_WINDOWS) { // Grant write data access to everyone, so we can delete the directory Runtime.getRuntime().exec("icacls " + tempDirectoryName + " /grant Everyone:(WD)").waitFor(); } else { Runtime.getRuntime().exec("chmod +w " + tempDirectoryName).waitFor(); } FileUtils.deleteDirectory(tempDirectoryPath.toFile()); } }
From source file:fr.ortolang.diffusion.store.binary.BinaryStoreServiceBean.java
private BinaryStoreContent pathToContent(Path path) { BinaryStoreContent content = new BinaryStoreContent(); content.setPath(base.relativize(path).toString()); if (Files.isDirectory(path)) { content.setType(Type.DIRECTORY); } else {/* w w w . j ava2 s .c om*/ content.setType(Type.FILE); } try { content.setSize(Files.size(path)); content.setLastModificationDate(Files.getLastModifiedTime(path).toMillis()); } catch (IOException e) { LOGGER.log(Level.WARNING, "Unable to retrieve binary store content information for path: " + path); } return content; }
From source file:fr.duminy.jbackup.core.ConfigurationManagerTest.java
private Path writeConfigFile(boolean config1) throws IOException { Path configFile = configDir.resolve((config1 ? CONFIG1 : CONFIG2) + ".xml"); String configXML = config1 ? CONFIG_XML : CONFIG_XML2; createFile(configFile, configXML);/*w ww .jav a 2 s .c o m*/ assertThat(Files.size(configFile)).as("config file size").isEqualTo(configXML.getBytes().length); return configFile; }
From source file:ch.silviowangler.dox.DocumentServiceImpl.java
@Override @CacheEvict(value = CACHE_DOCUMENT_COUNT, allEntries = true) @Transactional(propagation = REQUIRED, readOnly = false) @PreAuthorize("hasRole('ROLE_USER')") public DocumentReference importDocument(PhysicalDocument physicalDocumentApi) throws ValidationException, DocumentDuplicationException, DocumentClassNotFoundException { final String documentClassShortName = physicalDocumentApi.getDocumentClass().getShortName(); ch.silviowangler.dox.domain.DocumentClass documentClassEntity = findDocumentClass(documentClassShortName); List<Attribute> attributes = attributeRepository.findAttributesForDocumentClass(documentClassEntity); logger.debug("Found {} attributes for document class '{}'", attributes.size(), documentClassShortName); verifyMandatoryAttributes(physicalDocumentApi, attributes); verifyUnknownKeys(physicalDocumentApi, documentClassShortName, attributes); try {/*from w w w .j av a 2 s . c o m*/ verifyDomainValues(physicalDocumentApi, attributes); } catch (ValueNotInDomainException e) { ch.silviowangler.dox.domain.Domain domain = domainRepository.findByShortName(e.getDomainName()); if (domain.isStrict()) { logger.warn( "Domain '{}' is defined as strict domain and can therefore only accept predefined value", e.getDomainName()); throw e; } logger.debug("Adding value '{}' to domain '{}'", e.getValue(), e.getDomainName()); domain.getValues().add(e.getValue()); domainRepository.save(domain); verifyDomainValues(physicalDocumentApi, attributes); } physicalDocumentApi.setIndices(fixDataTypesOfIndices(physicalDocumentApi.getIndices(), attributes)); final String mimeType = investigateMimeType(physicalDocumentApi.getFileName()); final String hash = DigestUtils.sha256Hex(physicalDocumentApi.getContent()); final Document documentByHash = documentRepository.findByHash(hash); if (documentByHash != null) { throw new DocumentDuplicationException(documentByHash.getId(), hash); } IndexStore indexStore = new IndexStore(); updateIndices(physicalDocumentApi, indexStore); User user = getPrincipal(); Document document = new Document(hash, documentClassEntity, PAGE_NUMBER_NOT_RETRIEVABLE, mimeType, physicalDocumentApi.getFileName(), indexStore, user.getUsername()); document.setClient(clientRepository.findByShortName(physicalDocumentApi.getClient())); indexStore.setDocument(document); document = documentRepository.save(document); indexStoreRepository.save(indexStore); updateIndexMapEntries(toEntityMap(physicalDocumentApi.getIndices()), document); File target = new File(this.archiveDirectory, hash); try { FileUtils.writeByteArrayToFile(target, physicalDocumentApi.getContent()); } catch (IOException e) { logger.error("Unable to write file to store at {}", this.archiveDirectory.getAbsolutePath(), e); } try { final long size = Files.size(target.toPath()); document.setFileSize(size); final int numberOfPages = documentInspectorFactory.findDocumentInspector(mimeType) .retrievePageCount(target); document.setPageCount(numberOfPages); document = documentRepository.save(document); } catch (IOException e) { logger.error("Unable to calculate file size of file {}", target.getAbsolutePath(), e); } DocumentReference docRef = toDocumentReference(document, null); return docRef; }
From source file:onl.area51.filesystem.ftp.client.FTPClient.java
/** * Simple test to see if a remote file should be retrieved. * <p>/* ww w.j a va 2 s.co m*/ * This returns true if file does not exist, if the lengths don't match or the remote file's date is newer than the local file * <p> * @param file * @param ftp * <p> * @return */ default boolean isPathRetrievable(Path file, FTPFile ftp) throws IOException { return !Files.exists(file, LinkOption.NOFOLLOW_LINKS) || Files.size(file) != ftp.getSize() || Files.getLastModifiedTime(file, LinkOption.NOFOLLOW_LINKS).toMillis() < ftp.getTimestamp() .getTimeInMillis(); }
From source file:com.spectralogic.ds3client.integration.Smoke_Test.java
@Test public void testRecoverWriteJob() throws IOException, XmlProcessingException, JobRecoveryException, URISyntaxException { final String bucketName = "test_recover_write_job_bucket"; final String book1 = "beowulf.txt"; final String book2 = "ulysses.txt"; try {/*w w w .j a va 2s .c o m*/ HELPERS.ensureBucketExists(bucketName, envDataPolicyId); final Path objPath1 = ResourceUtils.loadFileResource(RESOURCE_BASE_NAME + book1); final Path objPath2 = ResourceUtils.loadFileResource(RESOURCE_BASE_NAME + book2); final Ds3Object obj1 = new Ds3Object(book1, Files.size(objPath1)); final Ds3Object obj2 = new Ds3Object(book2, Files.size(objPath2)); final Ds3ClientHelpers.Job job = Ds3ClientHelpers.wrap(client).startWriteJob(bucketName, Lists.newArrayList(obj1, obj2)); final PutObjectResponse putResponse1 = client.putObject(new PutObjectRequest(job.getBucketName(), book1, new ResourceObjectPutter(RESOURCE_BASE_NAME).buildChannel(book1), job.getJobId().toString(), 0, Files.size(objPath1))); assertThat(putResponse1, is(notNullValue())); assertThat(putResponse1.getStatusCode(), is(equalTo(200))); // Interuption... final Ds3ClientHelpers.Job recoverJob = HELPERS.recoverWriteJob(job.getJobId()); final PutObjectResponse putResponse2 = client.putObject(new PutObjectRequest(recoverJob.getBucketName(), book2, new ResourceObjectPutter(RESOURCE_BASE_NAME).buildChannel(book2), recoverJob.getJobId().toString(), 0, Files.size(objPath2))); assertThat(putResponse2, is(notNullValue())); assertThat(putResponse2.getStatusCode(), is(equalTo(200))); } finally { deleteAllContents(client, bucketName); } }
From source file:divconq.tool.release.Main.java
@Override public void run(Scanner scan, ApiSession api) { Path relpath = null;// www . jav a2s.c o m Path gitpath = null; Path wikigitpath = null; XElement fldset = Hub.instance.getConfig().selectFirst("CommandLine/Settings"); if (fldset != null) { relpath = Paths.get(fldset.getAttribute("ReleasePath")); gitpath = Paths.get(fldset.getAttribute("GitPath")); wikigitpath = Paths.get(fldset.getAttribute("WikiGitPath")); } boolean running = true; while (running) { try { System.out.println(); System.out.println("-----------------------------------------------"); System.out.println(" Release Builder Menu"); System.out.println("-----------------------------------------------"); System.out.println("0) Exit"); if (relpath != null) System.out.println("1) Build release package from Settings File"); System.out.println("2) Build custom release package [under construction]"); System.out.println("4) Pack the .jar files"); if (gitpath != null) System.out.println("5) Copy Source to GitHub folder"); System.out.println("6) Update AWWW"); String opt = scan.nextLine(); Long mopt = StringUtil.parseInt(opt); if (mopt == null) continue; switch (mopt.intValue()) { case 0: running = false; break; case 1: { ReleasesHelper releases = new ReleasesHelper(); if (!releases.init(relpath)) break; System.out.println("Select a release to build"); System.out.println("0) None"); List<String> rnames = releases.names(); for (int i = 0; i < rnames.size(); i++) System.out.println((i + 1) + ") " + rnames.get(i)); System.out.println("Option #: "); opt = scan.nextLine(); mopt = StringUtil.parseInt(opt); if ((mopt == null) || (mopt == 0)) break; XElement relchoice = releases.get(mopt.intValue() - 1); if (relchoice == null) { System.out.println("Invalid option"); break; } PackagesHelper availpackages = new PackagesHelper(); availpackages.init(); InstallHelper inst = new InstallHelper(); if (!inst.init(availpackages, relchoice)) break; XElement prindesc = availpackages.get(inst.prinpackage); XElement prininst = prindesc.find("Install"); if (prininst == null) { System.out.println("Principle package: " + inst.prinpackagenm + " cannot be released directly, it must be part of another package."); break; } String relvers = prindesc.getAttribute("Version"); System.out.println("Building release version " + relvers); if (prindesc.hasAttribute("LastVersion")) System.out.println("Previous release version " + prindesc.getAttribute("LastVersion")); String rname = relchoice.getAttribute("Name"); Path destpath = relpath.resolve(rname + "/" + rname + "-" + relvers + "-bin.zip"); if (Files.exists(destpath)) { System.out.println("Version " + relvers + " already exists, overwrite? (y/n): "); if (!scan.nextLine().toLowerCase().startsWith("y")) break; Files.delete(destpath); } System.out.println("Preparing zip files"); AtomicBoolean errored = new AtomicBoolean(); Path tempfolder = FileUtil.allocateTempFolder2(); ListStruct ignorepaths = new ListStruct(); Set<String> nolongerdepends = new HashSet<>(); Set<String> dependson = new HashSet<>(); // put all the release files into a temp folder inst.instpkgs.forEach(pname -> { availpackages.get(pname).selectAll("DependsOn").stream() .filter(doel -> !doel.hasAttribute("Option") || inst.relopts.contains(doel.getAttribute("Option"))) .forEach(doel -> { // copy all libraries we rely on doel.selectAll("Library").forEach(libel -> { dependson.add(libel.getAttribute("File")); Path src = Paths.get("./lib/" + libel.getAttribute("File")); Path dest = tempfolder.resolve("lib/" + libel.getAttribute("File")); try { Files.createDirectories(dest.getParent()); if (Files.notExists(dest)) Files.copy(src, dest, StandardCopyOption.COPY_ATTRIBUTES); } catch (Exception x) { errored.set(true); System.out.println("Unable to copy file: " + src); } }); // copy all files we rely on doel.selectAll("File").forEach(libel -> { Path src = Paths.get("./" + libel.getAttribute("Path")); Path dest = tempfolder.resolve(libel.getAttribute("Path")); try { Files.createDirectories(dest.getParent()); if (Files.notExists(dest)) Files.copy(src, dest, StandardCopyOption.COPY_ATTRIBUTES); } catch (Exception x) { errored.set(true); System.out.println("Unable to copy file: " + src); } }); // copy all folders we rely on doel.selectAll("Folder").forEach(libel -> { Path src = Paths.get("./" + libel.getAttribute("Path")); Path dest = tempfolder.resolve(libel.getAttribute("Path")); try { Files.createDirectories(dest.getParent()); } catch (Exception x) { errored.set(true); System.out.println("Unable to copy file: " + src); } OperationResult cres = FileUtil.copyFileTree(src, dest); if (cres.hasErrors()) errored.set(true); }); }); availpackages.get(pname).selectAll("IgnorePaths/Ignore") .forEach(doel -> ignorepaths.addItem(doel.getAttribute("Path"))); // NoLongerDependsOn functionally currently only applies to libraries availpackages.get(pname).selectAll("NoLongerDependsOn/Library") .forEach(doel -> nolongerdepends.add(doel.getAttribute("File"))); // copy the released packages folders Path src = Paths.get("./packages/" + pname); Path dest = tempfolder.resolve("packages/" + pname); try { Files.createDirectories(dest.getParent()); } catch (Exception x) { errored.set(true); System.out.println("Unable to copy file: " + src); } // we may wish to enhance filter to allow .JAR sometimes, but this is meant to prevent copying of packages/pname/lib/abc.lib.jar files OperationResult cres = FileUtil.copyFileTree(src, dest, path -> !path.toString().endsWith(".jar")); if (cres.hasErrors()) errored.set(true); // copy the released packages libraries Path libsrc = Paths.get("./packages/" + pname + "/lib"); Path libdest = tempfolder.resolve("lib"); if (Files.exists(libsrc)) { cres = FileUtil.copyFileTree(libsrc, libdest); if (cres.hasErrors()) errored.set(true); } }); if (errored.get()) { System.out.println("Error with assembling package"); break; } // copy the principle config Path csrc = Paths.get("./packages/" + inst.prinpackage + "/config"); Path cdest = tempfolder.resolve("config/" + inst.prinpackagenm); if (Files.exists(csrc)) { Files.createDirectories(cdest); OperationResult cres = FileUtil.copyFileTree(csrc, cdest); if (cres.hasErrors()) { System.out.println("Error with prepping config"); break; } } boolean configpassed = true; // copy packages with config = true for (XElement pkg : relchoice.selectAll("Package")) { if (!"true".equals(pkg.getAttribute("Config"))) break; String pname = pkg.getAttribute("Name"); int pspos = pname.lastIndexOf('/'); String pnm = (pspos != -1) ? pname.substring(pspos + 1) : pname; csrc = Paths.get("./packages/" + pname + "/config"); cdest = tempfolder.resolve("config/" + pnm); if (Files.exists(csrc)) { Files.createDirectories(cdest); OperationResult cres = FileUtil.copyFileTree(csrc, cdest); if (cres.hasErrors()) { System.out.println("Error with prepping extra config"); configpassed = false; break; } } } if (!configpassed) break; // also copy installer config if being used if (inst.includeinstaller) { csrc = Paths.get("./packages/dc/dcInstall/config"); cdest = tempfolder.resolve("config/dcInstall"); if (Files.exists(csrc)) { Files.createDirectories(cdest); OperationResult cres = FileUtil.copyFileTree(csrc, cdest); if (cres.hasErrors()) { System.out.println("Error with prepping install config"); break; } } } // write out the deployed file RecordStruct deployed = new RecordStruct(); deployed.setField("Version", relvers); deployed.setField("PackageFolder", relpath.resolve(rname)); deployed.setField("PackagePrefix", rname); OperationResult d1res = IOUtil.saveEntireFile(tempfolder.resolve("config/deployed.json"), deployed.toPrettyString()); if (d1res.hasErrors()) { System.out.println("Error with prepping deployed"); break; } RecordStruct deployment = new RecordStruct(); deployment.setField("Version", relvers); if (prindesc.hasAttribute("LastVersion")) deployment.setField("DependsOn", prindesc.getAttribute("LastVersion")); deployment.setField("UpdateMessage", "This update is complete, you may accept this update as runnable."); nolongerdepends.removeAll(dependson); ListStruct deletefiles = new ListStruct(); nolongerdepends.forEach(fname -> deletefiles.addItem("lib/" + fname)); deployment.setField("DeleteFiles", deletefiles); deployment.setField("IgnorePaths", ignorepaths); d1res = IOUtil.saveEntireFile(tempfolder.resolve("deployment.json"), deployment.toPrettyString()); if (d1res.hasErrors()) { System.out.println("Error with prepping deployment"); break; } // write env file d1res = IOUtil.saveEntireFile(tempfolder.resolve("env.bat"), "set mem=" + relchoice.getAttribute("Memory", "2048") + "\r\n" + "SET project=" + inst.prinpackagenm + "\r\n" + "SET service=" + relchoice.getAttribute("Service", inst.prinpackagenm) + "\r\n" + "SET servicename=" + relchoice.getAttribute("ServiceName", inst.prinpackagenm + " Service") + "\r\n"); if (d1res.hasErrors()) { System.out.println("Error with prepping env"); break; } System.out.println("Packing Release file."); Path relbin = relpath.resolve(rname + "/" + rname + "-" + relvers + "-bin.zip"); if (Files.notExists(relbin.getParent())) Files.createDirectories(relbin.getParent()); ZipArchiveOutputStream zipout = new ZipArchiveOutputStream(relbin.toFile()); try { Files.walkFileTree(tempfolder, EnumSet.of(FileVisitOption.FOLLOW_LINKS), Integer.MAX_VALUE, new SimpleFileVisitor<Path>() { @Override public FileVisitResult visitFile(Path file, BasicFileAttributes attrs) throws IOException { ZipArchiveEntry entry = new ZipArchiveEntry( tempfolder.relativize(file).toString()); entry.setSize(Files.size(file)); zipout.putArchiveEntry(entry); zipout.write(Files.readAllBytes(file)); zipout.closeArchiveEntry(); return FileVisitResult.CONTINUE; } }); } catch (IOException x) { System.out.println("Error building zip: " + x); } zipout.close(); System.out.println("Release file written"); FileUtil.deleteDirectory(tempfolder); break; } // end case 1 case 3: { System.out.println("Note these utilities are only good from the main console,"); System.out.println("if you are using a remote connection then the encryption will"); System.out.println("not work as expected. [we do not have access the master keys]"); System.out.println(); Foreground.utilityMenu(scan); break; } case 4: { System.out.println("Packing jar library files."); String[] packlist = new String[] { "divconq.core", "divconq.interchange", "divconq.web", "divconq.tasks", "divconq.tasks.api", "ncc.uploader.api", "ncc.uploader.core", "ncc.workflow", "sd.core" }; String[] packnames = new String[] { "dcCore", "dcInterchange", "dcWeb", "dcTasks", "dcTasksApi", "nccUploaderApi", "nccUploader", "nccWorkflow", "sd/sdBackend" }; for (int i = 0; i < packlist.length; i++) { String lib = packlist[i]; String pname = packnames[i]; Path relbin = Paths.get("./ext/" + lib + ".jar"); Path srcbin = Paths.get("./" + lib + "/bin"); Path packbin = Paths.get("./packages/" + pname + "/lib/" + lib + ".jar"); if (Files.notExists(relbin.getParent())) Files.createDirectories(relbin.getParent()); Files.deleteIfExists(relbin); ZipArchiveOutputStream zipout = new ZipArchiveOutputStream(relbin.toFile()); try { Files.walkFileTree(srcbin, EnumSet.of(FileVisitOption.FOLLOW_LINKS), Integer.MAX_VALUE, new SimpleFileVisitor<Path>() { @Override public FileVisitResult visitFile(Path file, BasicFileAttributes attrs) throws IOException { ZipArchiveEntry entry = new ZipArchiveEntry( srcbin.relativize(file).toString()); entry.setSize(Files.size(file)); zipout.putArchiveEntry(entry); zipout.write(Files.readAllBytes(file)); zipout.closeArchiveEntry(); return FileVisitResult.CONTINUE; } }); } catch (IOException x) { System.out.println("Error building zip: " + x); } zipout.close(); Files.copy(relbin, packbin, StandardCopyOption.REPLACE_EXISTING); } System.out.println("Done"); break; } case 5: { System.out.println("Copying Source Files"); System.out.println("Cleaning folders"); OperationResult or = FileUtil.deleteDirectory(gitpath.resolve("divconq.core/src/main/java")); if (or.hasErrors()) { System.out.println("Error deleting files"); break; } or = FileUtil.deleteDirectory(gitpath.resolve("divconq.core/src/main/resources")); if (or.hasErrors()) { System.out.println("Error deleting files"); break; } or = FileUtil.deleteDirectory(gitpath.resolve("divconq.interchange/src/main/java")); if (or.hasErrors()) { System.out.println("Error deleting files"); break; } or = FileUtil.deleteDirectory(gitpath.resolve("divconq.tasks/src/main/java")); if (or.hasErrors()) { System.out.println("Error deleting files"); break; } or = FileUtil.deleteDirectory(gitpath.resolve("divconq.tasks.api/src/main/java")); if (or.hasErrors()) { System.out.println("Error deleting files"); break; } or = FileUtil.deleteDirectory(gitpath.resolve("divconq.web/src/main/java")); if (or.hasErrors()) { System.out.println("Error deleting files"); break; } or = FileUtil.deleteDirectory(gitpath.resolve("packages")); if (or.hasErrors()) { System.out.println("Error deleting files"); break; } or = FileUtil.deleteDirectoryContent(wikigitpath, ".git"); if (or.hasErrors()) { System.out.println("Error deleting wiki files"); break; } System.out.println("Copying folders"); System.out.println("Copy tree ./divconq.core/src"); or = FileUtil.copyFileTree(Paths.get("./divconq.core/src/divconq"), gitpath.resolve("divconq.core/src/main/java/divconq"), new Predicate<Path>() { @Override public boolean test(Path file) { return file.getFileName().toString().endsWith(".java"); } }); if (or.hasErrors()) { System.out.println("Error copying files"); break; } or = FileUtil.copyFileTree(Paths.get("./divconq.core/src/org"), gitpath.resolve("divconq.core/src/main/java/org"), new Predicate<Path>() { @Override public boolean test(Path file) { return file.getFileName().toString().endsWith(".java"); } }); if (or.hasErrors()) { System.out.println("Error copying files"); break; } or = FileUtil.copyFileTree(Paths.get("./divconq.core/src/localize"), gitpath.resolve("divconq.core/src/main/resources/localize"), new Predicate<Path>() { @Override public boolean test(Path file) { return file.getFileName().toString().endsWith(".xml"); } }); if (or.hasErrors()) { System.out.println("Error copying files"); break; } System.out.println("Copy tree ./divconq.interchange/src"); or = FileUtil.copyFileTree(Paths.get("./divconq.interchange/src"), gitpath.resolve("divconq.interchange/src/main/java")); if (or.hasErrors()) { System.out.println("Error copying files"); break; } System.out.println("Copy tree ./divconq.tasks/src"); or = FileUtil.copyFileTree(Paths.get("./divconq.tasks/src"), gitpath.resolve("divconq.tasks/src/main/java")); if (or.hasErrors()) { System.out.println("Error copying files"); break; } System.out.println("Copy tree ./divconq.tasks.api/src"); or = FileUtil.copyFileTree(Paths.get("./divconq.tasks.api/src"), gitpath.resolve("divconq.tasks.api/src/main/java")); if (or.hasErrors()) { System.out.println("Error copying files"); break; } System.out.println("Copy tree ./divconq.web/src"); or = FileUtil.copyFileTree(Paths.get("./divconq.web/src"), gitpath.resolve("divconq.web/src/main/java")); if (or.hasErrors()) { System.out.println("Error copying files"); break; } System.out.println("Copy tree ./packages/dcCore"); or = FileUtil.copyFileTree(Paths.get("./packages/dcCore"), gitpath.resolve("packages/dcCore")); if (or.hasErrors()) { System.out.println("Error copying files"); break; } System.out.println("Copy tree ./packages/dcCorePublic"); or = FileUtil.copyFileTree(Paths.get("./packages/dcCorePublic"), gitpath.resolve("packages/dcCorePublic")); if (or.hasErrors()) { System.out.println("Error copying files"); break; } System.out.println("Copy tree ./packages/dcInterchange"); or = FileUtil.copyFileTree(Paths.get("./packages/dcInterchange"), gitpath.resolve("packages/dcInterchange")); if (or.hasErrors()) { System.out.println("Error copying files"); break; } System.out.println("Copy tree ./packages/dcTasks"); or = FileUtil.copyFileTree(Paths.get("./packages/dcTasks"), gitpath.resolve("packages/dcTasks")); if (or.hasErrors()) { System.out.println("Error copying files"); break; } System.out.println("Copy tree ./packages/dcTasksApi"); or = FileUtil.copyFileTree(Paths.get("./packages/dcTasksApi"), gitpath.resolve("packages/dcTasksApi")); if (or.hasErrors()) { System.out.println("Error copying files"); break; } System.out.println("Copy tree ./packages/dcTasksWeb"); or = FileUtil.copyFileTree(Paths.get("./packages/dcTasksWeb"), gitpath.resolve("packages/dcTasksWeb")); if (or.hasErrors()) { System.out.println("Error copying files"); break; } System.out.println("Copy tree ./packages/dcTest"); or = FileUtil.copyFileTree(Paths.get("./packages/dcTest"), gitpath.resolve("packages/dcTest")); if (or.hasErrors()) { System.out.println("Error copying files"); break; } System.out.println("Copy tree ./packages/dcWeb"); or = FileUtil.copyFileTree(Paths.get("./packages/dcWeb"), gitpath.resolve("packages/dcWeb")); if (or.hasErrors()) { System.out.println("Error copying files"); break; } System.out.println("Copy tree ./divconq.wiki/public"); or = FileUtil.copyFileTree(Paths.get("./divconq.wiki/public"), wikigitpath); if (or.hasErrors()) { System.out.println("Error copying files"); break; } System.out.println("Copying files"); Files.copy(Paths.get("./README.md"), gitpath.resolve("README.md"), StandardCopyOption.REPLACE_EXISTING, StandardCopyOption.COPY_ATTRIBUTES); Files.copy(Paths.get("./RELEASE_NOTES.md"), gitpath.resolve("RELEASE_NOTES.md"), StandardCopyOption.REPLACE_EXISTING, StandardCopyOption.COPY_ATTRIBUTES); Files.copy(Paths.get("./NOTICE.txt"), gitpath.resolve("NOTICE.txt"), StandardCopyOption.REPLACE_EXISTING, StandardCopyOption.COPY_ATTRIBUTES); Files.copy(Paths.get("./LICENSE.txt"), gitpath.resolve("LICENSE.txt"), StandardCopyOption.REPLACE_EXISTING, StandardCopyOption.COPY_ATTRIBUTES); System.out.println("Done"); break; } case 6: { System.out.println("Are you sure you want to update AWWW Server? (y/n): "); if (!scan.nextLine().toLowerCase().startsWith("y")) break; ReleasesHelper releases = new ReleasesHelper(); if (!releases.init(relpath)) break; XElement relchoice = releases.get("AWWWServer"); if (relchoice == null) { System.out.println("Invalid option"); break; } PackagesHelper availpackages = new PackagesHelper(); availpackages.init(); InstallHelper inst = new InstallHelper(); if (!inst.init(availpackages, relchoice)) break; ServerHelper ssh = new ServerHelper(); if (!ssh.init(relchoice.find("SSH"))) break; ChannelSftp sftp = null; try { Channel channel = ssh.session().openChannel("sftp"); channel.connect(); sftp = (ChannelSftp) channel; // go to routines folder sftp.cd("/usr/local/bin/dc/AWWWServer"); FileRepositoryBuilder builder = new FileRepositoryBuilder(); Repository repository = builder.setGitDir(new File(".git")).findGitDir() // scan up the file system tree .build(); String lastsync = releases.getData("AWWWServer").getFieldAsString("LastCommitSync"); RevWalk rw = new RevWalk(repository); ObjectId head1 = repository.resolve(Constants.HEAD); RevCommit commit1 = rw.parseCommit(head1); releases.getData("AWWWServer").setField("LastCommitSync", head1.name()); ObjectId rev2 = repository.resolve(lastsync); RevCommit parent = rw.parseCommit(rev2); //RevCommit parent2 = rw.parseCommit(parent.getParent(0).getId()); DiffFormatter df = new DiffFormatter(DisabledOutputStream.INSTANCE); df.setRepository(repository); df.setDiffComparator(RawTextComparator.DEFAULT); df.setDetectRenames(true); // list oldest first or change types are all wrong!! List<DiffEntry> diffs = df.scan(parent.getTree(), commit1.getTree()); for (DiffEntry diff : diffs) { String gnpath = diff.getNewPath(); String gopath = diff.getOldPath(); Path npath = Paths.get("./" + gnpath); Path opath = Paths.get("./" + gopath); if (diff.getChangeType() == ChangeType.DELETE) { if (inst.containsPathExtended(opath)) { System.out.println("- " + diff.getChangeType().name() + " - " + opath); try { sftp.rm(opath.toString()); System.out.println("deleted!!"); } catch (SftpException x) { System.out.println( " !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!"); System.out.println("Sftp Error: " + x); System.out.println( " !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!"); } } else { System.out.println("/ " + diff.getChangeType().name() + " - " + gopath + " !!!!!!!!!!!!!!!!!!!!!!!!!"); } } else if ((diff.getChangeType() == ChangeType.ADD) || (diff.getChangeType() == ChangeType.MODIFY) || (diff.getChangeType() == ChangeType.COPY)) { if (inst.containsPathExtended(npath)) { System.out.println("+ " + diff.getChangeType().name() + " - " + npath); try { ssh.makeDirSftp(sftp, npath.getParent()); sftp.put(npath.toString(), npath.toString(), ChannelSftp.OVERWRITE); sftp.chmod(npath.endsWith(".sh") ? 484 : 420, npath.toString()); // 644 octal = 420 dec, 744 octal = 484 dec System.out.println("uploaded!!"); } catch (SftpException x) { System.out.println( " !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!"); System.out.println("Sftp Error: " + x); System.out.println( " !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!"); } } else { System.out.println("> " + diff.getChangeType().name() + " - " + gnpath + " !!!!!!!!!!!!!!!!!!!!!!!!!"); } } else if (diff.getChangeType() == ChangeType.RENAME) { // remove the old if (inst.containsPathExtended(opath)) { System.out.println("- " + diff.getChangeType().name() + " - " + opath); try { sftp.rm(opath.toString()); System.out.println("deleted!!"); } catch (SftpException x) { System.out.println( " !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!"); System.out.println("Sftp Error: " + x); System.out.println( " !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!"); } } else { System.out.println("/ " + diff.getChangeType().name() + " - " + gopath + " !!!!!!!!!!!!!!!!!!!!!!!!!"); } // add the new path if (inst.containsPathExtended(npath)) { System.out.println("+ " + diff.getChangeType().name() + " - " + npath); try { ssh.makeDirSftp(sftp, npath.getParent()); sftp.put(npath.toString(), npath.toString(), ChannelSftp.OVERWRITE); sftp.chmod(npath.endsWith(".sh") ? 484 : 420, npath.toString()); // 644 octal = 420 dec, 744 octal = 484 dec System.out.println("uploaded!!"); } catch (SftpException x) { System.out.println( " !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!"); System.out.println("Sftp Error: " + x); System.out.println( " !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!"); } } else { System.out.println("> " + diff.getChangeType().name() + " - " + gnpath + " !!!!!!!!!!!!!!!!!!!!!!!!!"); } } else { System.out.println("??????????????????????????????????????????????????????????"); System.out.println(": " + diff.getChangeType().name() + " - " + gnpath + " ?????????????????????????"); System.out.println("??????????????????????????????????????????????????????????"); } } rw.dispose(); repository.close(); releases.saveData(); } catch (JSchException x) { System.out.println("Sftp Error: " + x); } finally { if (sftp.isConnected()) sftp.exit(); ssh.close(); } break; } case 7: { Path sfolder = Paths.get("/Work/Projects/awww-current/dairy-graze/poly"); Path dfolder = Paths.get("/Work/Projects/awww-current/dairy-graze/poly-js"); Files.list(sfolder).forEach(file -> { String fname = file.getFileName().toString(); if (!fname.endsWith(".xml")) return; FuncResult<XElement> lres = XmlReader.loadFile(file, false); if (lres.isEmptyResult()) { System.out.println("Unable to parse: " + file); return; } String zc = fname.substring(5, 8); String code = "zipsData['" + zc + "'] = "; XElement root = lres.getResult(); /* <polyline1 lng="-90.620897" lat="45.377447"/> <polyline1 lng="-90.619327" lat="45.3805"/> [-71.196845,41.67757],[-71.120168,41.496831],[-71.317338,41.474923],[-71.196845,41.67757] */ ListStruct center = new ListStruct(); ListStruct cords = new ListStruct(); ListStruct currentPoly = null; //String currentName = null; for (XElement child : root.selectAll("*")) { String cname = child.getName(); if (cname.startsWith("marker")) { // not always accurate if (center.isEmpty()) center.addItem(Struct.objectToDecimal(child.getAttribute("lng")), Struct.objectToDecimal(child.getAttribute("lat"))); currentPoly = new ListStruct(); cords.addItem(new ListStruct(currentPoly)); continue; } /* if (cname.startsWith("info")) { System.out.println("areas: " + child.getAttribute("areas")); continue; } */ if (!cname.startsWith("polyline")) continue; if (currentPoly == null) { //if (!cname.equals(currentName)) { //if (currentName == null) { // currentName = cname; // System.out.println("new poly: " + cname); currentPoly = new ListStruct(); cords.addItem(new ListStruct(currentPoly)); } currentPoly.addItem(new ListStruct(Struct.objectToDecimal(child.getAttribute("lng")), Struct.objectToDecimal(child.getAttribute("lat")))); } RecordStruct feat = new RecordStruct().withField("type", "Feature") .withField("id", "zip" + zc) .withField("properties", new RecordStruct().withField("name", "Prefix " + zc).withField("alias", zc)) .withField("geometry", new RecordStruct().withField("type", "MultiPolygon") .withField("coordinates", cords)); RecordStruct entry = new RecordStruct().withField("code", zc).withField("geo", feat) .withField("center", center); IOUtil.saveEntireFile2(dfolder.resolve("us-zips-" + zc + ".js"), code + entry.toPrettyString() + ";"); }); break; } } } catch (Exception x) { System.out.println("CLI error: " + x); } } }
From source file:org.apache.taverna.prov.W3ProvenanceExport.java
protected void storeFileReferences() { for (Entry<Path, T2Reference> entry : getFileToT2Reference().entrySet()) { Path file = entry.getKey(); try {// ww w .j a v a 2 s .com T2Reference t2Ref = entry.getValue(); URI dataURI = URI.create(uriGenerator.makeT2ReferenceURI(t2Ref.toUri().toASCIIString())); Individual entity = provModel.createArtifact(dataURI); String mediaType = saver.getMediaTypes().get(t2Ref); if (!Files.exists(file)) { continue; } URI contentUri; if (DataBundles.isReference(file)) { // TODO: Do we really need to read this back again from the // file? contentUri = DataBundles.getReference(file); } else { contentUri = toURI(file); } Individual content = provModel.setContent(entity, contentUri); if (mediaType != null) { mediaTypes.put(contentUri, mediaType); } if (!DataBundles.isValue(file)) { // Don't capture the checksum and content of references and // lists continue; } // Add checksums String sha1 = saver.getSha1sums().get(file.toRealPath()); if (sha1 != null) { content.addLiteral(provModel.sha1, sha1); } String sha512 = saver.getSha512sums().get(file.toRealPath()); if (sha512 != null) { content.addLiteral(provModel.sha512, sha512); } long byteCount = Files.size(file); content.addLiteral(provModel.byteCount, byteCount); if (byteCount < EMBEDDED_MAX_FILESIZE) { // Add content if it's "tiny" byte[] bytes = Files.readAllBytes(file); if (mediaType != null && mediaType.startsWith(TEXT)) { // as string - assuming UTF8 (and declaring so) String str = new String(bytes, UTF8); content.addLiteral(provModel.chars, str); content.addLiteral(provModel.characterEncoding, UTF8.name()); content.addRDFType(provModel.ContentAsText); } else { // Or base64-encoded bytes content.addRDFType(provModel.ContentAsBase64); content.addLiteral(provModel.bytes, bytes); } } } catch (IOException e) { logger.warn("Could not read " + file + " as " + UTF8, e); } } }
From source file:com.spectralogic.ds3client.integration.PutJobManagement_Test.java
@Test public void cancelAllJobsWithForce() throws Exception { final int testTimeOutSeconds = 5; final String book1 = "beowulf.txt"; final Path objPath1 = ResourceUtils.loadFileResource(RESOURCE_BASE_NAME + book1); final String book2 = "ulysses.txt"; final Path objPath2 = ResourceUtils.loadFileResource(RESOURCE_BASE_NAME + book2); final Ds3Object obj1 = new Ds3Object(book1, Files.size(objPath1)); final Ds3Object obj2 = new Ds3Object("place_holder_1", 5000000); final Ds3Object obj3 = new Ds3Object(book2, Files.size(objPath2)); final Ds3Object obj4 = new Ds3Object("place_holder_2", 5000000); try {/*www. j av a2s . c om*/ final Ds3ClientHelpers.Job putJob1 = HELPERS.startWriteJob(BUCKET_NAME, Lists.newArrayList(obj1, obj2)); final UUID jobId1 = putJob1.getJobId(); final SeekableByteChannel book1Channel = new ResourceObjectPutter(RESOURCE_BASE_NAME) .buildChannel(book1); client.putObject(new PutObjectRequest(BUCKET_NAME, book1, book1Channel, jobId1.toString(), 0, Files.size(objPath1))); final Ds3ClientHelpers.Job putJob2 = HELPERS.startWriteJob(BUCKET_NAME, Lists.newArrayList(obj3, obj4)); final UUID jobId2 = putJob2.getJobId(); final SeekableByteChannel book2Channel = new ResourceObjectPutter(RESOURCE_BASE_NAME) .buildChannel(book2); client.putObject(new PutObjectRequest(BUCKET_NAME, book2, book2Channel, jobId2.toString(), 0, Files.size(objPath2))); HELPERS.startWriteJob(BUCKET_NAME, Lists.newArrayList(new Ds3Object("place_holder_3", 1000000))); ABMTestHelper.waitForJobCachedSizeToBeMoreThanZero(jobId1, client, 20); ABMTestHelper.waitForJobCachedSizeToBeMoreThanZero(jobId2, client, 20); client.cancelAllJobsSpectraS3(new CancelAllJobsSpectraS3Request()); assertTrue(client.getActiveJobsSpectraS3(new GetActiveJobsSpectraS3Request()).getActiveJobListResult() .getActiveJobs().isEmpty()); } finally { deleteAllContents(client, BUCKET_NAME); } }
From source file:org.eclipse.winery.repository.backend.filebased.FilebasedRepository.java
@Override public void doDump(OutputStream out) throws IOException { final ZipOutputStream zout = new ZipOutputStream(out); final int cutLength = this.repositoryRoot.toString().length() + 1; Files.walkFileTree(this.repositoryRoot, new SimpleFileVisitor<Path>() { @Override//w w w .j a v a2 s . c o m public FileVisitResult preVisitDirectory(Path dir, BasicFileAttributes attrs) { if (dir.endsWith(".git")) { return FileVisitResult.SKIP_SUBTREE; } else { return FileVisitResult.CONTINUE; } } @Override public FileVisitResult visitFile(Path file, BasicFileAttributes attrs) { String name = file.toString().substring(cutLength); ZipEntry ze = new ZipEntry(name); try { ze.setTime(Files.getLastModifiedTime(file).toMillis()); ze.setSize(Files.size(file)); zout.putNextEntry(ze); Files.copy(file, zout); zout.closeEntry(); } catch (IOException e) { FilebasedRepository.logger.debug(e.getMessage()); } return FileVisitResult.CONTINUE; } }); zout.close(); }