Example usage for java.nio ByteOrder LITTLE_ENDIAN

List of usage examples for java.nio ByteOrder LITTLE_ENDIAN

Introduction

In this page you can find the example usage for java.nio ByteOrder LITTLE_ENDIAN.

Prototype

ByteOrder LITTLE_ENDIAN

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Document

This constant represents little endian.

Usage

From source file:edu.harvard.iq.dvn.ingest.statdataio.impl.plugins.dta.DTAFileReader.java

private void decodeDescriptorVarSortList(BufferedInputStream stream, int nvar) throws IOException {
    int length_var_sort_list = VAR_SORT_FIELD_LENGTH * (nvar + 1);
    if (dbgLog.isLoggable(Level.FINE))
        dbgLog.fine("length_var_sort_list=" + length_var_sort_list);

    byte[] varSortList = new byte[length_var_sort_list];
    short[] variableSortList = new short[nvar + 1];

    int nbytes = stream.read(varSortList, 0, length_var_sort_list);

    if (nbytes == 0) {
        throw new IOException("reading error: the varSortList");
    }//from w  ww .  j ava 2  s  . c  o m

    int offset_start = 0;
    for (int i = 0; i <= nvar; i++) {

        ByteBuffer bb_varSortList = ByteBuffer.wrap(varSortList, offset_start, VAR_SORT_FIELD_LENGTH);
        if (isLittleEndian) {
            bb_varSortList.order(ByteOrder.LITTLE_ENDIAN);
        }
        variableSortList[i] = bb_varSortList.getShort();

        offset_start += VAR_SORT_FIELD_LENGTH;
    }
    if (dbgLog.isLoggable(Level.FINE))
        dbgLog.fine("variableSortList=" + Arrays.toString(variableSortList));

}

From source file:nodomain.freeyourgadget.gadgetbridge.service.devices.pebble.PebbleProtocol.java

byte[] encodeActivateHealth(boolean activate) {
    byte[] blob;/*from w  w  w.  j ava  2  s. c o  m*/
    if (activate) {

        ByteBuffer buf = ByteBuffer.allocate(9);
        buf.order(ByteOrder.LITTLE_ENDIAN);

        ActivityUser activityUser = new ActivityUser();
        Integer heightMm = activityUser.getHeightCm() * 10;
        buf.putShort(heightMm.shortValue());
        Integer weigthDag = activityUser.getWeightKg() * 100;
        buf.putShort(weigthDag.shortValue());
        buf.put((byte) 0x01); //activate tracking
        buf.put((byte) 0x00); //activity Insights
        buf.put((byte) 0x00); //sleep Insights
        buf.put((byte) activityUser.getAge());
        buf.put((byte) activityUser.getGender());
        blob = buf.array();
    } else {
        blob = new byte[] { 0x00, 0x00, 0x00, 0x00, 0x00, 0x00, 0x00, 0x00, 0x00 };
    }
    return encodeBlobdb("activityPreferences", BLOBDB_INSERT, BLOBDB_PREFERENCES, blob);
}

From source file:au.org.ala.layers.intersect.Grid.java

/**
 * for DomainGenerator// w  w  w .j  av  a 2s  . c  om
 * <p/>
 * writes out a list of double (same as getGrid() returns) to a file
 * <p/>
 * byteorderlsb
 * data type, FLOAT
 *
 * @param newfilename
 * @param dfiltered
 */
public void writeGrid(String newfilename, int[] dfiltered, double xmin, double ymin, double xmax, double ymax,
        double xres, double yres, int nrows, int ncols) {
    int size, i, length = dfiltered.length;
    double maxvalue = Integer.MAX_VALUE * -1;
    double minvalue = Integer.MAX_VALUE;

    //write data as whole file
    RandomAccessFile afile = null;
    try { //read of random access file can throw an exception
        afile = new RandomAccessFile(newfilename + ".gri", "rw");

        size = 4;
        byte[] b = new byte[size * length];
        ByteBuffer bb = ByteBuffer.wrap(b);

        if (byteorderLSB) {
            bb.order(ByteOrder.LITTLE_ENDIAN);
        } else {
            bb.order(ByteOrder.BIG_ENDIAN);
        }
        for (i = 0; i < length; i++) {
            bb.putInt(dfiltered[i]);
        }

        afile.write(b);
    } catch (Exception e) {
        logger.error("error writing grid file", e);
    } finally {
        if (afile != null) {
            try {
                afile.close();
            } catch (Exception e) {
                logger.error(e.getMessage(), e);
            }
        }
    }

    writeHeader(newfilename, xmin, ymin, xmin + xres * ncols, ymin + yres * nrows, xres, yres, nrows, ncols,
            minvalue, maxvalue, "INT4BYTES", "-9999");

}

From source file:edu.harvard.iq.dvn.ingest.statdataio.impl.plugins.sav.SAVFileReader.java

void decodeRecordType2(BufferedInputStream stream) throws IOException {
    dbgLog.fine("***** decodeRecordType2(): start *****");
    if (stream == null) {
        throw new IllegalArgumentException("stream == null!");
    }/*  w w w.j av  a2 s.  c  o m*/

    Map<String, String> variableLabelMap = new LinkedHashMap<String, String>();
    Map<String, List<String>> missingValueTable = new LinkedHashMap<String, List<String>>();
    List<Integer> printFormatList = new ArrayList<Integer>();

    String caseWeightVariableName = null;
    int caseWeightVariableIndex = 0;

    boolean lastVariableIsExtendable = false;
    boolean extendedVariableMode = false;
    boolean obs255 = false;

    String lastVariableName = null;
    String lastExtendedVariable = null;

    // this field repeats as many as the number of variables in
    // this sav file

    // (note that the above statement is not technically correct, this
    //  record repeats not just for every variable in the file, but for
    //  every OBS (8 byte unit); i.e., if a string is split into multiple
    //  OBS units, each one will have its own RT2 record -- L.A.).

    // Each field constists of a fixed (32-byte) segment and
    // then a few variable segments:
    // if the variable has a label (3rd INT4 set to 1), then there's 4 more
    // bytes specifying the length of the label, and then that many bytes
    // holding the label itself (no more than 256).
    // Then if there are optional missing value units (4th INT4 set to 1)
    // there will be 3 more OBS units attached = 24 extra bytes.

    int variableCounter = 0;
    int obsSeqNumber = 0;

    int j;

    dbgLog.fine("RT2: Reading " + OBSUnitsPerCase + " OBS units.");

    for (j = 0; j < OBSUnitsPerCase; j++) {

        dbgLog.fine("RT2: \n\n+++++++++++ " + j + "-th RT2 unit is to be decoded +++++++++++");
        // 2.0: read the fixed[=non-optional] 32-byte segment
        byte[] recordType2Fixed = new byte[LENGTH_RECORDTYPE2_FIXED];

        try {
            int nbytes = stream.read(recordType2Fixed, 0, LENGTH_RECORDTYPE2_FIXED);

            //printHexDump(recordType2Fixed, "recordType2 part 1");

            if (nbytes == 0) {
                throw new IOException("reading recordType2: no bytes read!");
            }

            int offset = 0;

            // 2.1: create int-view of the bytebuffer for the first 16-byte segment
            int rt2_1st_4_units = 4;
            ByteBuffer[] bb_record_type2_fixed_part1 = new ByteBuffer[rt2_1st_4_units];
            int[] recordType2FixedPart1 = new int[rt2_1st_4_units];
            for (int i = 0; i < rt2_1st_4_units; i++) {

                bb_record_type2_fixed_part1[i] = ByteBuffer.wrap(recordType2Fixed, offset,
                        LENGTH_SAV_INT_BLOCK);

                offset += LENGTH_SAV_INT_BLOCK;
                if (isLittleEndian) {
                    bb_record_type2_fixed_part1[i].order(ByteOrder.LITTLE_ENDIAN);
                }
                recordType2FixedPart1[i] = bb_record_type2_fixed_part1[i].getInt();
            }

            dbgLog.fine("recordType2FixedPart=" + ReflectionToStringBuilder.toString(recordType2FixedPart1,
                    ToStringStyle.MULTI_LINE_STYLE));

            // 1st ([0]) element must be 2 otherwise no longer Record Type 2
            if (recordType2FixedPart1[0] != 2) {
                dbgLog.info(j + "-th RT header value is no longet RT2! " + recordType2FixedPart1[0]);
                break;
                //throw new IOException("RT2 reading error: The current position is no longer Record Type 2");
            }
            dbgLog.fine("variable type[must be 2]=" + recordType2FixedPart1[0]);

            // 2.3 variable name: 8 byte(space[x20]-padded)
            // This field is located at the very end of the 32 byte
            // fixed-size RT2 header (bytes 24-31).
            // We are processing it now, so that
            // we can make the decision on whether this variable is part
            // of a compound variable:

            String RawVariableName = new String(
                    Arrays.copyOfRange(recordType2Fixed, 24, (24 + LENGTH_VARIABLE_NAME)), defaultCharSet);
            //offset +=LENGTH_VARIABLE_NAME;
            String variableName = null;
            if (RawVariableName.indexOf(' ') >= 0) {
                variableName = RawVariableName.substring(0, RawVariableName.indexOf(' '));
            } else {
                variableName = RawVariableName;
            }

            // 2nd ([1]) element: numeric variable = 0 :for string variable
            // this block indicates its datum-length, i.e, >0 ;
            // if -1, this RT2 unit is a non-1st RT2 unit for a string variable
            // whose value is longer than 8 character.

            boolean isNumericVariable = false;

            dbgLog.fine("variable type(0: numeric; > 0: String;-1 continue )=" + recordType2FixedPart1[1]);

            //OBSwiseTypelList.add(recordType2FixedPart1[1]);

            int HowManyRt2Units = 1;

            if (recordType2FixedPart1[1] == -1) {
                dbgLog.fine("this RT2 is an 8 bit continuation chunk of an earlier string variable");
                if (obs255) {
                    if (obsSeqNumber < 30) {
                        OBSwiseTypelList.add(recordType2FixedPart1[1]);
                        obsSeqNumber++;
                    } else {
                        OBSwiseTypelList.add(-2);
                        obs255 = false;
                        obsSeqNumber = 0;
                    }
                } else {
                    OBSwiseTypelList.add(recordType2FixedPart1[1]);
                }

                obsNonVariableBlockSet.add(j);
                continue;
            } else if (recordType2FixedPart1[1] == 0) {
                // This is a numeric variable
                extendedVariableMode = false;
                // And as such, it cannot be an extension of a
                // previous, long string variable.
                OBSwiseTypelList.add(recordType2FixedPart1[1]);
                variableCounter++;
                isNumericVariable = true;
                variableTypelList.add(recordType2FixedPart1[1]);
            } else if (recordType2FixedPart1[1] > 0) {

                // This looks like a regular string variable. However,
                // it may still be a part of a compound variable
                // (a String > 255 bytes that was split into 255 byte
                // chunks, stored as individual String variables).

                if (recordType2FixedPart1[1] == 255) {
                    obs255 = true;
                }

                if (lastVariableIsExtendable) {
                    String varNameBase = null;
                    if (lastVariableName.length() > 5) {
                        varNameBase = lastVariableName.substring(0, 5);
                    } else {
                        varNameBase = lastVariableName;
                    }

                    if (extendedVariableMode) {
                        if (variableNameIsAnIncrement(varNameBase, lastExtendedVariable, variableName)) {
                            OBSwiseTypelList.add(-1);
                            lastExtendedVariable = variableName;
                            // OK, we stay in the "extended variable" mode;
                            // but we can't move on to the next OBS (hence the commented out
                            // "continue" below:
                            //continue;
                            // see the next comment below for the explanation.
                            //
                            // Should we also set "extendable" flag to false at this point
                            // if it's shorter than 255 bytes, i.e. the last extended chunk?
                        } else {
                            extendedVariableMode = false;
                        }
                    } else {
                        if (variableNameIsAnIncrement(varNameBase, variableName)) {
                            OBSwiseTypelList.add(-1);
                            extendedVariableMode = true;
                            dbgLog.fine("RT2: in extended variable mode; variable " + variableName);
                            lastExtendedVariable = variableName;
                            // Before we move on to the next OBS unit, we need to check
                            // if this current extended variable has its own label specified;
                            // If so, we need to determine its length, then read and skip
                            // that many bytes.
                            // Hence the commented out "continue" below:
                            //continue;
                        }
                    }
                }

                if (!extendedVariableMode) {
                    // OK, this is a "real"
                    // string variable, and not a continuation chunk of a compound
                    // string.

                    OBSwiseTypelList.add(recordType2FixedPart1[1]);
                    variableCounter++;

                    if (recordType2FixedPart1[1] == 255) {
                        // This variable is 255 bytes long, i.e. this is
                        // either the single "atomic" variable of the
                        // max allowed size, or it's a 255 byte segment
                        // of a compound variable. So we will check
                        // the next variable and see if it is the continuation
                        // of this one.

                        lastVariableIsExtendable = true;
                    } else {
                        lastVariableIsExtendable = false;
                    }

                    if (recordType2FixedPart1[1] % LENGTH_SAV_OBS_BLOCK == 0) {
                        HowManyRt2Units = recordType2FixedPart1[1] / LENGTH_SAV_OBS_BLOCK;
                    } else {
                        HowManyRt2Units = recordType2FixedPart1[1] / LENGTH_SAV_OBS_BLOCK + 1;
                    }
                    variableTypelList.add(recordType2FixedPart1[1]);
                }
            }

            if (!extendedVariableMode) {
                // Again, we only want to do the following steps for the "real"
                // variables, not the chunks of split mega-variables:

                dbgLog.fine("RT2: HowManyRt2Units for this variable=" + HowManyRt2Units);

                lastVariableName = variableName;

                // caseWeightVariableOBSIndex starts from 1: 0 is used for does-not-exist cases
                if (j == (caseWeightVariableOBSIndex - 1)) {
                    caseWeightVariableName = variableName;
                    caseWeightVariableIndex = variableCounter;

                    smd.setCaseWeightVariableName(caseWeightVariableName);
                    smd.getFileInformation().put("caseWeightVariableIndex", caseWeightVariableIndex);
                }

                OBSIndexToVariableName.put(j, variableName);

                //dbgLog.fine("\nvariable name="+variableName+"<-");
                dbgLog.fine("RT2: " + j + "-th variable name=" + variableName + "<-");
                dbgLog.fine("RT2: raw variable: " + RawVariableName);

                variableNameList.add(variableName);
            }

            // 3rd ([2]) element: = 1 variable-label block follows; 0 = no label
            //
            dbgLog.fine("RT: variable label follows?(1:yes; 0: no)=" + recordType2FixedPart1[2]);
            boolean hasVariableLabel = recordType2FixedPart1[2] == 1 ? true : false;
            if ((recordType2FixedPart1[2] != 0) && (recordType2FixedPart1[2] != 1)) {
                throw new IOException("RT2: reading error: value is neither 0 or 1" + recordType2FixedPart1[2]);
            }

            // 2.4 [optional]The length of a variable label followed: 4-byte int
            // 3rd element of 2.1 indicates whether this field exists
            // *** warning: The label block is padded to a multiple of the 4-byte
            // NOT the raw integer value of this 4-byte block

            if (hasVariableLabel) {
                byte[] length_variable_label = new byte[4];
                int nbytes_2_4 = stream.read(length_variable_label);
                if (nbytes_2_4 == 0) {
                    throw new IOException("RT 2: error reading recordType2.4: no bytes read!");
                } else {
                    dbgLog.fine("nbytes_2_4=" + nbytes_2_4);
                }
                ByteBuffer bb_length_variable_label = ByteBuffer.wrap(length_variable_label, 0,
                        LENGTH_VARIABLE_LABEL);
                if (isLittleEndian) {
                    bb_length_variable_label.order(ByteOrder.LITTLE_ENDIAN);
                }
                int rawVariableLabelLength = bb_length_variable_label.getInt();

                dbgLog.fine("rawVariableLabelLength=" + rawVariableLabelLength);
                int variableLabelLength = getSAVintAdjustedBlockLength(rawVariableLabelLength);
                dbgLog.fine("RT2: variableLabelLength=" + variableLabelLength);

                // 2.5 [optional]variable label whose length is found at 2.4

                String variableLabel = "";

                if (rawVariableLabelLength > 0) {
                    byte[] variable_label = new byte[variableLabelLength];
                    int nbytes_2_5 = stream.read(variable_label);
                    if (nbytes_2_5 == 0) {
                        throw new IOException("RT 2: error reading recordType2.5: " + variableLabelLength
                                + " bytes requested, no bytes read!");
                    } else {
                        dbgLog.fine("nbytes_2_5=" + nbytes_2_5);
                    }
                    variableLabel = new String(Arrays.copyOfRange(variable_label, 0, rawVariableLabelLength),
                            defaultCharSet);
                    dbgLog.fine("RT2: variableLabel=" + variableLabel + "<-");

                    dbgLog.info(variableName + " => " + variableLabel);
                } else {
                    dbgLog.fine("RT2: defaulting to empty variable label.");
                }

                if (!extendedVariableMode) {
                    // We only have any use for this label if it's a "real" variable.
                    // Thinking about it, it doesn't make much sense for the "fake"
                    // variables that are actually chunks of large strings to store
                    // their own labels. But in some files they do. Then failing to read
                    // the bytes would result in getting out of sync with the RT record
                    // borders. So we always read the bytes, but only use them for
                    // the real variable entries.
                    /*String variableLabel = new String(Arrays.copyOfRange(variable_label,
                        0, rawVariableLabelLength),"US-ASCII");*/

                    variableLabelMap.put(variableName, variableLabel);
                }
            }

            if (extendedVariableMode) {
                // there's nothing else left for us to do in this iteration of the loop.
                // Once again, this was not a real variable, but a dummy variable entry
                // created for a chunk of a string variable longer than 255 bytes --
                // that's how SPSS stores them.
                continue;
            }

            // 4th ([3]) element: Missing value type code
            // 0[none], 1, 2, 3 [point-type],-2[range], -3 [range type+ point]

            dbgLog.fine("RT: missing value unit follows?(if 0, none)=" + recordType2FixedPart1[3]);
            boolean hasMissingValues = (validMissingValueCodeSet.contains(recordType2FixedPart1[3])
                    && (recordType2FixedPart1[3] != 0)) ? true : false;

            InvalidData invalidDataInfo = null;

            if (recordType2FixedPart1[3] != 0) {
                invalidDataInfo = new InvalidData(recordType2FixedPart1[3]);
                dbgLog.fine("RT: missing value type=" + invalidDataInfo.getType());
            }

            // 2.2: print/write formats: 4-byte each = 8 bytes

            byte[] printFormt = Arrays.copyOfRange(recordType2Fixed, offset, offset + LENGTH_PRINT_FORMAT_CODE);
            dbgLog.fine("printFrmt=" + new String(Hex.encodeHex(printFormt)));

            offset += LENGTH_PRINT_FORMAT_CODE;
            int formatCode = isLittleEndian ? printFormt[2] : printFormt[1];
            int formatWidth = isLittleEndian ? printFormt[1] : printFormt[2];
            int formatDecimalPointPosition = isLittleEndian ? printFormt[0] : printFormt[3];
            dbgLog.fine("RT2: format code{5=F, 1=A[String]}=" + formatCode);

            formatDecimalPointPositionList.add(formatDecimalPointPosition);

            if (!SPSSConstants.FORMAT_CODE_TABLE_SAV.containsKey(formatCode)) {
                throw new IOException("Unknown format code was found = " + formatCode);
            } else {
                printFormatList.add(formatCode);
            }

            byte[] writeFormt = Arrays.copyOfRange(recordType2Fixed, offset, offset + LENGTH_WRITE_FORMAT_CODE);

            dbgLog.fine("RT2: writeFrmt=" + new String(Hex.encodeHex(writeFormt)));
            if (writeFormt[3] != 0x00) {
                dbgLog.fine("byte-order(write format): reversal required");
            }

            offset += LENGTH_WRITE_FORMAT_CODE;

            if (!SPSSConstants.ORDINARY_FORMAT_CODE_SET.contains(formatCode)) {
                StringBuilder sb = new StringBuilder(
                        SPSSConstants.FORMAT_CODE_TABLE_SAV.get(formatCode) + formatWidth);
                if (formatDecimalPointPosition > 0) {
                    sb.append("." + formatDecimalPointPosition);
                }
                dbgLog.info("formattable[i] = " + variableName + " -> " + sb.toString());
                printFormatNameTable.put(variableName, sb.toString());

            }

            printFormatTable.put(variableName, SPSSConstants.FORMAT_CODE_TABLE_SAV.get(formatCode));

            // 2.6 [optional] missing values:4-byte each if exists
            // 4th element of 2.1 indicates the structure of this sub-field

            // Should we perhaps check for this for the "fake" variables too?
            //

            if (hasMissingValues) {
                dbgLog.fine("RT2: decoding missing value: type=" + recordType2FixedPart1[3]);
                int howManyMissingValueUnits = missingValueCodeUnits.get(recordType2FixedPart1[3]);
                //int howManyMissingValueUnits = recordType2FixedPart1[3] > 0 ? recordType2FixedPart1[3] :  0;

                dbgLog.fine("RT2: howManyMissingValueUnits=" + howManyMissingValueUnits);

                byte[] missing_value_code_units = new byte[LENGTH_SAV_OBS_BLOCK * howManyMissingValueUnits];
                int nbytes_2_6 = stream.read(missing_value_code_units);

                if (nbytes_2_6 == 0) {
                    throw new IOException("RT 2: reading recordType2.6: no byte was read");
                } else {
                    dbgLog.fine("nbytes_2_6=" + nbytes_2_6);
                }

                //printHexDump(missing_value_code_units, "missing value");

                if (isNumericVariable) {

                    double[] missingValues = new double[howManyMissingValueUnits];
                    //List<String> mvp = new ArrayList<String>();
                    List<String> mv = new ArrayList<String>();

                    ByteBuffer[] bb_missig_value_code = new ByteBuffer[howManyMissingValueUnits];

                    int offset_start = 0;

                    for (int i = 0; i < howManyMissingValueUnits; i++) {

                        bb_missig_value_code[i] = ByteBuffer.wrap(missing_value_code_units, offset_start,
                                LENGTH_SAV_OBS_BLOCK);

                        offset_start += LENGTH_SAV_OBS_BLOCK;
                        if (isLittleEndian) {
                            bb_missig_value_code[i].order(ByteOrder.LITTLE_ENDIAN);
                        }

                        ByteBuffer temp = bb_missig_value_code[i].duplicate();

                        missingValues[i] = bb_missig_value_code[i].getDouble();
                        if (Double.toHexString(missingValues[i]).equals("-0x1.ffffffffffffep1023")) {
                            dbgLog.fine("1st value is LOWEST");
                            mv.add(Double.toHexString(missingValues[i]));
                        } else if (Double.valueOf(missingValues[i]).equals(Double.MAX_VALUE)) {
                            dbgLog.fine("2nd value is HIGHEST");
                            mv.add(Double.toHexString(missingValues[i]));
                        } else {
                            mv.add(doubleNumberFormatter.format(missingValues[i]));
                        }
                        dbgLog.fine(i + "-th missing value=" + Double.toHexString(missingValues[i]));
                    }

                    dbgLog.fine("variableName=" + variableName);
                    if (recordType2FixedPart1[3] > 0) {
                        // point cases only
                        dbgLog.fine("mv(>0)=" + mv);
                        missingValueTable.put(variableName, mv);
                        invalidDataInfo.setInvalidValues(mv);
                    } else if (recordType2FixedPart1[3] == -2) {
                        dbgLog.fine("mv(-2)=" + mv);
                        // range
                        invalidDataInfo.setInvalidRange(mv);
                    } else if (recordType2FixedPart1[3] == -3) {
                        // mixed case
                        dbgLog.fine("mv(-3)=" + mv);
                        invalidDataInfo.setInvalidRange(mv.subList(0, 2));
                        invalidDataInfo.setInvalidValues(mv.subList(2, 3));
                        missingValueTable.put(variableName, mv.subList(2, 3));
                    }

                    dbgLog.fine("missing value=" + StringUtils.join(missingValueTable.get(variableName), "|"));
                    dbgLog.fine("invalidDataInfo(Numeric):\n" + invalidDataInfo);
                    invalidDataTable.put(variableName, invalidDataInfo);
                } else {
                    // string variable case
                    String[] missingValues = new String[howManyMissingValueUnits];
                    List<String> mv = new ArrayList<String>();
                    int offset_start = 0;
                    int offset_end = LENGTH_SAV_OBS_BLOCK;
                    for (int i = 0; i < howManyMissingValueUnits; i++) {

                        missingValues[i] = StringUtils.stripEnd(new String(
                                Arrays.copyOfRange(missing_value_code_units, offset_start, offset_end),
                                defaultCharSet), " ");
                        dbgLog.fine("missing value=" + missingValues[i] + "<-");

                        offset_start = offset_end;
                        offset_end += LENGTH_SAV_OBS_BLOCK;

                        mv.add(missingValues[i]);
                    }
                    invalidDataInfo.setInvalidValues(mv);
                    missingValueTable.put(variableName, mv);
                    invalidDataTable.put(variableName, invalidDataInfo);
                    dbgLog.fine(
                            "missing value(str)=" + StringUtils.join(missingValueTable.get(variableName), "|"));
                    dbgLog.fine("invalidDataInfo(String):\n" + invalidDataInfo);

                } // string case
                dbgLog.fine("invalidDataTable:\n" + invalidDataTable);
            } // if msv

        } catch (IOException ex) {
            //ex.printStackTrace();
            throw ex;
        } catch (Exception ex) {
            ex.printStackTrace();
            // should we be throwing some exception here?
        }
    } // j-loop

    if (j == OBSUnitsPerCase) {
        dbgLog.fine("RT2 metadata-related exit-chores");
        smd.getFileInformation().put("varQnty", variableCounter);
        varQnty = variableCounter;
        dbgLog.fine("RT2: varQnty=" + varQnty);

        smd.setVariableName(variableNameList.toArray(new String[variableNameList.size()]));
        smd.setVariableLabel(variableLabelMap);
        smd.setMissingValueTable(missingValueTable);
        smd.getFileInformation().put("caseWeightVariableName", caseWeightVariableName);

        dbgLog.info("sumstat:long case=" + Arrays.deepToString(variableTypelList.toArray()));

        smd.setVariableFormat(printFormatList);
        smd.setVariableFormatName(printFormatNameTable);

        dbgLog.info("<<<<<<");
        dbgLog.info("printFormatList = " + printFormatList);
        dbgLog.info("printFormatNameTable = " + printFormatNameTable);
        // dbgLog.info("formatCategoryTable = " + formatCategoryTable);
        dbgLog.info(">>>>>>");

        dbgLog.fine("RT2: OBSwiseTypelList=" + OBSwiseTypelList);

        // variableType is determined after the valueTable is finalized
    } else {
        dbgLog.info("RT2: attention! didn't reach the end of the OBS list!");
        throw new IOException("RT2: didn't reach the end of the OBS list!");
    }
    dbgLog.fine("***** decodeRecordType2(): end *****");
}

From source file:edu.hawaii.soest.kilonalu.dvp2.DavisWxParser.java

/**
 * get the value from the nextRecord field
 *
 * @return nextRecord - the nextRecord as an integer
 *///  w  w w. jav  a  2  s.  co m
public int getNextRecord() {
    this.nextRecord.flip();
    return (int) this.nextRecord.order(ByteOrder.LITTLE_ENDIAN).getShort();
}

From source file:edu.hawaii.soest.kilonalu.dvp2.DavisWxParser.java

/**
 * get the value from the barometer field
 *
 * @return barometer - the barometer as a float
 *//*ww w . ja v  a  2s  .c o  m*/
public float getBarometer() {
    this.barometer.flip();
    return (float) (this.barometer.order(ByteOrder.LITTLE_ENDIAN).getShort()) / 1000;
}

From source file:nodomain.freeyourgadget.gadgetbridge.service.devices.pebble.PebbleProtocol.java

private byte[] encodeBlobDBClear(byte database) {
    final short LENGTH_BLOBDB_CLEAR = 4;
    ByteBuffer buf = ByteBuffer.allocate(LENGTH_PREFIX + LENGTH_BLOBDB_CLEAR);

    buf.order(ByteOrder.BIG_ENDIAN);
    buf.putShort(LENGTH_BLOBDB_CLEAR);/*from www .java  2 s .co  m*/
    buf.putShort(ENDPOINT_BLOBDB);

    buf.order(ByteOrder.LITTLE_ENDIAN);
    buf.put(BLOBDB_CLEAR);
    buf.putShort((short) mRandom.nextInt()); // token
    buf.put(database);

    return buf.array();
}

From source file:edu.hawaii.soest.kilonalu.dvp2.DavisWxParser.java

/**
 * get the value from the insideTemperature field
 *
 * @return insideTemperature - the insideTemperature as a float
 *//*  w  w  w  .ja v  a 2  s .  co  m*/
public float getInsideTemperature() {
    this.insideTemperature.flip();
    return (float) (this.insideTemperature.order(ByteOrder.LITTLE_ENDIAN).getShort()) / 10;
}

From source file:gephi.spade.panel.fcsFile.java

/**
 * readFloatData ---/* w w w  . j  a v a 2 s.c  o  m*/
 * <p>
 * Reads floating point values in list mode in the DATA segment and updates
 * eventList with the integer values of the values.
 * </p>
 *
 * @param data
 *            <code>ByteBuffer</code> containing the DATA segment of the
 *            underlying file.
 */
private void readFloatData(ByteBuffer data) {
    // Allocate the eventList
    eventList = new double[parameters][totalEvents];

    if (littleEndianP) {
        data.order(ByteOrder.LITTLE_ENDIAN);
    }

    // Convert the byte buffer into a float buffer - doesn't get any easier
    FloatBuffer fb = data.asFloatBuffer();

    final int totalEvents = this.totalEvents;
    final int parameters = this.parameters;

    for (int i = 0; i < totalEvents; i++) {
        for (int j = 0; j < parameters; j++) {
            // Store the value into the array
            eventList[j][i] = fb.get();
        }
    }
}

From source file:au.org.ala.layers.intersect.Grid.java

/**
 * for grid cutter//  w w  w. j  a  v  a  2s  . c  o m
 * <p/>
 * writes out a list of double (same as getGrid() returns) to a file
 * <p/>
 * byteorderlsb
 * data type, FLOAT
 *
 * @param newfilename
 * @param dfiltered
 */
public void writeGrid(String newfilename, double[] dfiltered, double xmin, double ymin, double xmax,
        double ymax, double xres, double yres, int nrows, int ncols) {
    int size, i, length = dfiltered.length;
    double maxvalue = Double.MAX_VALUE * -1;
    double minvalue = Double.MAX_VALUE;

    //write data as whole file
    RandomAccessFile afile = null;
    try { //read of random access file can throw an exception
        afile = new RandomAccessFile(newfilename + ".gri", "rw");

        size = 4;
        byte[] b = new byte[size * length];
        ByteBuffer bb = ByteBuffer.wrap(b);

        if (byteorderLSB) {
            bb.order(ByteOrder.LITTLE_ENDIAN);
        } else {
            bb.order(ByteOrder.BIG_ENDIAN);
        }
        for (i = 0; i < length; i++) {
            if (Double.isNaN(dfiltered[i])) {
                bb.putFloat((float) noDataValueDefault);
            } else {
                if (minvalue > dfiltered[i]) {
                    minvalue = dfiltered[i];
                }
                if (maxvalue < dfiltered[i]) {
                    maxvalue = dfiltered[i];
                }
                bb.putFloat((float) dfiltered[i]);
            }
        }

        afile.write(b);
    } catch (Exception e) {
        logger.error("error writing grid file", e);
    } finally {
        if (afile != null) {
            try {
                afile.close();
            } catch (Exception e) {
                logger.error(e.getMessage(), e);
            }
        }
    }

    writeHeader(newfilename, xmin, ymin, xmin + xres * ncols, ymin + yres * nrows, xres, yres, nrows, ncols,
            minvalue, maxvalue, "FLT4BYTES", String.valueOf(noDataValueDefault));
}