List of usage examples for java.lang System currentTimeMillis
@HotSpotIntrinsicCandidate public static native long currentTimeMillis();
From source file:fr.inria.atlanmod.kyanos.benchmarks.ase2015.NeoEMFGraphQueryGetBranchStatements.java
public static void main(String[] args) { Options options = new Options(); Option inputOpt = OptionBuilder.create(IN); inputOpt.setArgName("INPUT"); inputOpt.setDescription("Input Kyanos resource directory"); inputOpt.setArgs(1);//from w w w . j a v a2 s . co m inputOpt.setRequired(true); Option inClassOpt = OptionBuilder.create(EPACKAGE_CLASS); inClassOpt.setArgName("CLASS"); inClassOpt.setDescription("FQN of EPackage implementation class"); inClassOpt.setArgs(1); inClassOpt.setRequired(true); Option optFileOpt = OptionBuilder.create(OPTIONS_FILE); optFileOpt.setArgName("FILE"); optFileOpt.setDescription("Properties file holding the options to be used in the Kyanos Resource"); optFileOpt.setArgs(1); options.addOption(inputOpt); options.addOption(inClassOpt); options.addOption(optFileOpt); CommandLineParser parser = new PosixParser(); try { PersistenceBackendFactoryRegistry.getFactories().put(NeoBlueprintsURI.NEO_GRAPH_SCHEME, new BlueprintsPersistenceBackendFactory()); CommandLine commandLine = parser.parse(options, args); URI uri = NeoBlueprintsURI.createNeoGraphURI(new File(commandLine.getOptionValue(IN))); Class<?> inClazz = NeoEMFGraphQueryGetBranchStatements.class.getClassLoader() .loadClass(commandLine.getOptionValue(EPACKAGE_CLASS)); inClazz.getMethod("init").invoke(null); ResourceSet resourceSet = new ResourceSetImpl(); resourceSet.getResourceFactoryRegistry().getProtocolToFactoryMap() .put(NeoBlueprintsURI.NEO_GRAPH_SCHEME, PersistentResourceFactory.eINSTANCE); Resource resource = resourceSet.createResource(uri); Map<String, Object> loadOpts = new HashMap<String, Object>(); if (commandLine.hasOption(OPTIONS_FILE)) { Properties properties = new Properties(); properties.load(new FileInputStream(new File(commandLine.getOptionValue(OPTIONS_FILE)))); for (final Entry<Object, Object> entry : properties.entrySet()) { loadOpts.put((String) entry.getKey(), (String) entry.getValue()); } } // Add the LoadedObjectCounter store List<StoreOption> storeOptions = new ArrayList<StoreOption>(); // storeOptions.add(PersistentResourceOptions.EStoreOption.LOADED_OBJECT_COUNTER_LOGGING); storeOptions.add(BlueprintsResourceOptions.EStoreGraphOption.AUTOCOMMIT); loadOpts.put(PersistentResourceOptions.STORE_OPTIONS, storeOptions); resource.load(loadOpts); { Runtime.getRuntime().gc(); long initialUsedMemory = Runtime.getRuntime().totalMemory() - Runtime.getRuntime().freeMemory(); LOG.log(Level.INFO, MessageFormat.format("Used memory before query: {0}", MessageUtil.byteCountToDisplaySize(initialUsedMemory))); LOG.log(Level.INFO, "Start query"); long begin = System.currentTimeMillis(); Set<TextElement> list = ASE2015JavaQueries.getCommentsTagContent(resource); long end = System.currentTimeMillis(); LOG.log(Level.INFO, "End query"); LOG.log(Level.INFO, MessageFormat.format("Query result contains {0} elements", list.size())); LOG.log(Level.INFO, MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin))); Runtime.getRuntime().gc(); long finalUsedMemory = Runtime.getRuntime().totalMemory() - Runtime.getRuntime().freeMemory(); LOG.log(Level.INFO, MessageFormat.format("Used memory after query: {0}", MessageUtil.byteCountToDisplaySize(finalUsedMemory))); LOG.log(Level.INFO, MessageFormat.format("Memory use increase: {0}", MessageUtil.byteCountToDisplaySize(finalUsedMemory - initialUsedMemory))); } if (resource instanceof PersistentResourceImpl) { PersistentResourceImpl.shutdownWithoutUnload((PersistentResourceImpl) resource); } else { resource.unload(); } } catch (ParseException e) { MessageUtil.showError(e.toString()); MessageUtil.showError("Current arguments: " + Arrays.toString(args)); HelpFormatter formatter = new HelpFormatter(); formatter.printHelp("java -jar <this-file.jar>", options, true); } catch (Throwable e) { MessageUtil.showError(e.toString()); } }
From source file:edu.isi.karma.rdf.OfflineRdfGenerator.java
public static void main(String[] args) { Options options = createCommandLineOptions(); CommandLine cl = CommandLineArgumentParser.parse(args, options, OfflineRdfGenerator.class.getSimpleName()); if (cl == null) { return;//from w ww . java2 s. c o m } try { OfflineRdfGenerator generator = new OfflineRdfGenerator(cl); long start = System.currentTimeMillis(); generator.generate(); long end = System.currentTimeMillis(); logger.info("Time to generate RDF:" + (float) (end - start) / (1000 * 60) + " mins"); } catch (Exception e) { logger.error("Error occured while generating RDF!", e); } }
From source file:com.aestel.chemistry.openEye.fp.Fingerprinter.java
public static void main(String... args) throws IOException { long start = System.currentTimeMillis(); long iCounter = 0; // create command line Options object Options options = new Options(); Option opt = new Option("in", true, "input file [.ism,.sdf,...]"); opt.setRequired(true);/*from w w w .ja v a 2 s .c o m*/ options.addOption(opt); opt = new Option("out", true, "output file .tsv or oe-supported"); opt.setRequired(true); options.addOption(opt); opt = new Option("idTag", true, "field with ID (default title)"); opt.setRequired(false); options.addOption(opt); opt = new Option("fpType", true, "fingerPrintType: maccs|linear7|linear7*4|HashLinear7*4\n" + " maccs: generate maccs keys\n" + " linear7 generate 7 bonds long linear fingerprints (210k known rest hashed)\n" + " linear7*4 linear 7 bonds if more than 4 atoms code atoms as * (5.1k known rest hashed)\n" + " HashLinear7*4: as linear7*4 but hashed to 16k"); opt.setRequired(true); options.addOption(opt); opt = new Option("format", true, "folded512|folded2048|bitList|fragList|none\n" + " folded512/2048: hex encoded 512/2048 bits\n" + " bitList: list of bitpositions\n" + " none: no fp output for use with writeCodeMap"); opt.setRequired(true); options.addOption(opt); opt = new Option("writeCodeMap", false, "Overwrite the codeMap file at the end of processing"); opt.setRequired(false); options.addOption(opt); CommandLineParser parser = new PosixParser(); CommandLine cmd = null; try { cmd = parser.parse(options, args); } catch (Exception e) { System.err.println(e.getMessage()); exitWithHelp(options); } args = cmd.getArgs(); if (cmd.hasOption("d")) { System.err.println("Start debugger and press return:"); new BufferedReader(new InputStreamReader(System.in)).readLine(); } String idTag = null; if (cmd.hasOption("idTag")) idTag = cmd.getOptionValue("idTag"); String outformat = cmd.getOptionValue("format").toLowerCase().intern(); if (args.length != 0) { exitWithHelp(options); } String type = cmd.getOptionValue("fpType"); boolean updateDictionaryFile = cmd.hasOption("writeCodeMap"); boolean hashUnknownFrag = true; if (type.equals("HashLinear7*4")) hashUnknownFrag = false; if (type.equals("maccs")) hashUnknownFrag = false; if (updateDictionaryFile) hashUnknownFrag = false; Fingerprinter fprinter = createFingerprinter(type, updateDictionaryFile, hashUnknownFrag); OEMolBase mol = new OEGraphMol(); String inFile = cmd.getOptionValue("in"); String outFile = cmd.getOptionValue("out"); oemolistream ifs = new oemolistream(inFile); Runtime rt = Runtime.getRuntime(); Outputter out; if (outFile.endsWith(".txt") || outFile.endsWith(".tab")) out = new TabOutputter(fprinter.getMapper(), outFile, outformat); else out = new OEOutputter(fprinter.getMapper(), outFile, type, outformat); while (oechem.OEReadMolecule(ifs, mol)) { iCounter++; Fingerprint fp = fprinter.getFingerprint(mol); String id; if (idTag == null) id = mol.GetTitle(); else id = oechem.OEGetSDData(mol, idTag); if (iCounter % 100 == 0) System.err.print("."); if (iCounter % 4000 == 0) { System.err.printf(" %d %dsec\tt=%d f=%d u=%d m=%d tf=%d\n", iCounter, (System.currentTimeMillis() - start) / 1000, rt.totalMemory() / 1024, rt.freeMemory() / 1024, (rt.totalMemory() - rt.freeMemory()) / 1024, rt.maxMemory() / 1024, (rt.freeMemory() + (rt.maxMemory() - rt.totalMemory())) / 1024); } out.output(id, mol, fp); } System.err.printf("Fingerprinter: Read %d structures in %d sec\n", iCounter, (System.currentTimeMillis() - start) / 1000); if (updateDictionaryFile) fprinter.writeDictionary(); out.close(); fprinter.close(); }
From source file:de.uni_potsdam.hpi.bpt.promnicat.analysisModules.indices.NodeCountIndex.java
public static void main(String[] args) throws IllegalTypeException { Long start = System.currentTimeMillis(); (new NodeCountIndex()).run(); Long time = System.currentTimeMillis() - start; System.out.println("Time used: " + (time / 1000 / 60) + " min " + (time / 1000 % 60) + " sec"); }
From source file:fr.inria.atlanmod.kyanos.benchmarks.ase2015.NeoEMFGraphQueryGrabats09.java
public static void main(String[] args) { Options options = new Options(); Option inputOpt = OptionBuilder.create(IN); inputOpt.setArgName("INPUT"); inputOpt.setDescription("Input Kyanos resource directory"); inputOpt.setArgs(1);/*from w w w . j ava2s. c o m*/ inputOpt.setRequired(true); Option inClassOpt = OptionBuilder.create(EPACKAGE_CLASS); inClassOpt.setArgName("CLASS"); inClassOpt.setDescription("FQN of EPackage implementation class"); inClassOpt.setArgs(1); inClassOpt.setRequired(true); Option optFileOpt = OptionBuilder.create(OPTIONS_FILE); optFileOpt.setArgName("FILE"); optFileOpt.setDescription("Properties file holding the options to be used in the Kyanos Resource"); optFileOpt.setArgs(1); options.addOption(inputOpt); options.addOption(inClassOpt); options.addOption(optFileOpt); CommandLineParser parser = new PosixParser(); try { PersistenceBackendFactoryRegistry.getFactories().put(NeoBlueprintsURI.NEO_GRAPH_SCHEME, new BlueprintsPersistenceBackendFactory()); CommandLine commandLine = parser.parse(options, args); URI uri = NeoBlueprintsURI.createNeoGraphURI(new File(commandLine.getOptionValue(IN))); Class<?> inClazz = NeoEMFGraphQueryGrabats09.class.getClassLoader() .loadClass(commandLine.getOptionValue(EPACKAGE_CLASS)); inClazz.getMethod("init").invoke(null); ResourceSet resourceSet = new ResourceSetImpl(); resourceSet.getResourceFactoryRegistry().getProtocolToFactoryMap() .put(NeoBlueprintsURI.NEO_GRAPH_SCHEME, PersistentResourceFactory.eINSTANCE); Resource resource = resourceSet.createResource(uri); Map<String, Object> loadOpts = new HashMap<String, Object>(); if (commandLine.hasOption(OPTIONS_FILE)) { Properties properties = new Properties(); properties.load(new FileInputStream(new File(commandLine.getOptionValue(OPTIONS_FILE)))); for (final Entry<Object, Object> entry : properties.entrySet()) { loadOpts.put((String) entry.getKey(), (String) entry.getValue()); } } // Add the LoadedObjectCounter store List<StoreOption> storeOptions = new ArrayList<StoreOption>(); // storeOptions.add(PersistentResourceOptions.EStoreOption.LOADED_OBJECT_COUNTER_LOGGING); storeOptions.add(BlueprintsResourceOptions.EStoreGraphOption.AUTOCOMMIT); loadOpts.put(PersistentResourceOptions.STORE_OPTIONS, storeOptions); resource.load(loadOpts); { Runtime.getRuntime().gc(); long initialUsedMemory = Runtime.getRuntime().totalMemory() - Runtime.getRuntime().freeMemory(); LOG.log(Level.INFO, MessageFormat.format("Used memory before query: {0}", MessageUtil.byteCountToDisplaySize(initialUsedMemory))); LOG.log(Level.INFO, "Start query"); long begin = System.currentTimeMillis(); EList<ClassDeclaration> list = ASE2015JavaQueries.grabats09(resource); long end = System.currentTimeMillis(); LOG.log(Level.INFO, "End query"); LOG.log(Level.INFO, MessageFormat.format("Query result contains {0} elements", list.size())); LOG.log(Level.INFO, MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin))); Runtime.getRuntime().gc(); long finalUsedMemory = Runtime.getRuntime().totalMemory() - Runtime.getRuntime().freeMemory(); LOG.log(Level.INFO, MessageFormat.format("Used memory after query: {0}", MessageUtil.byteCountToDisplaySize(finalUsedMemory))); LOG.log(Level.INFO, MessageFormat.format("Memory use increase: {0}", MessageUtil.byteCountToDisplaySize(finalUsedMemory - initialUsedMemory))); } if (resource instanceof PersistentResourceImpl) { PersistentResourceImpl.shutdownWithoutUnload((PersistentResourceImpl) resource); } else { resource.unload(); } } catch (ParseException e) { MessageUtil.showError(e.toString()); MessageUtil.showError("Current arguments: " + Arrays.toString(args)); HelpFormatter formatter = new HelpFormatter(); formatter.printHelp("java -jar <this-file.jar>", options, true); } catch (Throwable e) { MessageUtil.showError(e.toString()); } }
From source file:de.uni_potsdam.hpi.bpt.promnicat.analysisModules.indices.LabelAsynchIndex.java
public static void main(String[] args) throws IllegalTypeException { long start = System.currentTimeMillis(); (new LabelAsynchIndex()).run(); long time = System.currentTimeMillis() - start; System.out.println("Time used: " + (time / 1000 / 60) + " min " + (time / 1000 % 60) + " sec"); }
From source file:fr.inria.atlanmod.kyanos.benchmarks.ase2015.NeoEMFGraphQuerySpecificInvisibleMethodDeclarations.java
public static void main(String[] args) { Options options = new Options(); Option inputOpt = OptionBuilder.create(IN); inputOpt.setArgName("INPUT"); inputOpt.setDescription("Input Kyanos resource directory"); inputOpt.setArgs(1);//from ww w. j av a 2 s. c o m inputOpt.setRequired(true); Option inClassOpt = OptionBuilder.create(EPACKAGE_CLASS); inClassOpt.setArgName("CLASS"); inClassOpt.setDescription("FQN of EPackage implementation class"); inClassOpt.setArgs(1); inClassOpt.setRequired(true); Option optFileOpt = OptionBuilder.create(OPTIONS_FILE); optFileOpt.setArgName("FILE"); optFileOpt.setDescription("Properties file holding the options to be used in the Kyanos Resource"); optFileOpt.setArgs(1); options.addOption(inputOpt); options.addOption(inClassOpt); options.addOption(optFileOpt); CommandLineParser parser = new PosixParser(); try { PersistenceBackendFactoryRegistry.getFactories().put(NeoBlueprintsURI.NEO_GRAPH_SCHEME, new BlueprintsPersistenceBackendFactory()); CommandLine commandLine = parser.parse(options, args); URI uri = NeoBlueprintsURI.createNeoGraphURI(new File(commandLine.getOptionValue(IN))); Class<?> inClazz = NeoEMFGraphQuerySpecificInvisibleMethodDeclarations.class.getClassLoader() .loadClass(commandLine.getOptionValue(EPACKAGE_CLASS)); inClazz.getMethod("init").invoke(null); ResourceSet resourceSet = new ResourceSetImpl(); resourceSet.getResourceFactoryRegistry().getProtocolToFactoryMap() .put(NeoBlueprintsURI.NEO_GRAPH_SCHEME, PersistentResourceFactory.eINSTANCE); Resource resource = resourceSet.createResource(uri); Map<String, Object> loadOpts = new HashMap<String, Object>(); if (commandLine.hasOption(OPTIONS_FILE)) { Properties properties = new Properties(); properties.load(new FileInputStream(new File(commandLine.getOptionValue(OPTIONS_FILE)))); for (final Entry<Object, Object> entry : properties.entrySet()) { loadOpts.put((String) entry.getKey(), (String) entry.getValue()); } } // Add the LoadedObjectCounter store List<StoreOption> storeOptions = new ArrayList<StoreOption>(); // storeOptions.add(PersistentResourceOptions.EStoreOption.LOADED_OBJECT_COUNTER_LOGGING); storeOptions.add(BlueprintsResourceOptions.EStoreGraphOption.AUTOCOMMIT); loadOpts.put(PersistentResourceOptions.STORE_OPTIONS, storeOptions); resource.load(loadOpts); { Runtime.getRuntime().gc(); long initialUsedMemory = Runtime.getRuntime().totalMemory() - Runtime.getRuntime().freeMemory(); LOG.log(Level.INFO, MessageFormat.format("Used memory before query: {0}", MessageUtil.byteCountToDisplaySize(initialUsedMemory))); LOG.log(Level.INFO, "Start query"); long begin = System.currentTimeMillis(); EList<MethodDeclaration> list = ASE2015JavaQueries.getSpecificInvisibleMethodDeclarations(resource); long end = System.currentTimeMillis(); LOG.log(Level.INFO, "End query"); LOG.log(Level.INFO, MessageFormat.format("Query result contains {0} elements", list.size())); LOG.log(Level.INFO, MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin))); Runtime.getRuntime().gc(); long finalUsedMemory = Runtime.getRuntime().totalMemory() - Runtime.getRuntime().freeMemory(); LOG.log(Level.INFO, MessageFormat.format("Used memory after query: {0}", MessageUtil.byteCountToDisplaySize(finalUsedMemory))); LOG.log(Level.INFO, MessageFormat.format("Memory use increase: {0}", MessageUtil.byteCountToDisplaySize(finalUsedMemory - initialUsedMemory))); } if (resource instanceof PersistentResourceImpl) { PersistentResourceImpl.shutdownWithoutUnload((PersistentResourceImpl) resource); } else { resource.unload(); } } catch (ParseException e) { MessageUtil.showError(e.toString()); MessageUtil.showError("Current arguments: " + Arrays.toString(args)); HelpFormatter formatter = new HelpFormatter(); formatter.printHelp("java -jar <this-file.jar>", options, true); } catch (Throwable e) { MessageUtil.showError(e.toString()); } }
From source file:fr.inria.atlanmod.kyanos.benchmarks.ase2015.NeoEMFMapQueryGrabats09.java
public static void main(String[] args) { Options options = new Options(); Option inputOpt = OptionBuilder.create(IN); inputOpt.setArgName("INPUT"); inputOpt.setDescription("Input Kyanos resource directory"); inputOpt.setArgs(1);//from www.j av a 2 s .co m inputOpt.setRequired(true); Option inClassOpt = OptionBuilder.create(EPACKAGE_CLASS); inClassOpt.setArgName("CLASS"); inClassOpt.setDescription("FQN of EPackage implementation class"); inClassOpt.setArgs(1); inClassOpt.setRequired(true); Option optFileOpt = OptionBuilder.create(OPTIONS_FILE); optFileOpt.setArgName("FILE"); optFileOpt.setDescription("Properties file holding the options to be used in the Kyanos Resource"); optFileOpt.setArgs(1); options.addOption(inputOpt); options.addOption(inClassOpt); options.addOption(optFileOpt); CommandLineParser parser = new PosixParser(); try { PersistenceBackendFactoryRegistry.getFactories().put(NeoMapURI.NEO_MAP_SCHEME, new MapPersistenceBackendFactory()); CommandLine commandLine = parser.parse(options, args); URI uri = NeoMapURI.createNeoMapURI(new File(commandLine.getOptionValue(IN))); Class<?> inClazz = NeoEMFMapQueryGrabats09.class.getClassLoader() .loadClass(commandLine.getOptionValue(EPACKAGE_CLASS)); inClazz.getMethod("init").invoke(null); ResourceSet resourceSet = new ResourceSetImpl(); resourceSet.getResourceFactoryRegistry().getProtocolToFactoryMap().put(NeoMapURI.NEO_MAP_SCHEME, PersistentResourceFactory.eINSTANCE); Resource resource = resourceSet.createResource(uri); Map<String, Object> loadOpts = new HashMap<String, Object>(); if (commandLine.hasOption(OPTIONS_FILE)) { Properties properties = new Properties(); properties.load(new FileInputStream(new File(commandLine.getOptionValue(OPTIONS_FILE)))); for (final Entry<Object, Object> entry : properties.entrySet()) { loadOpts.put((String) entry.getKey(), (String) entry.getValue()); } } // Add the LoadedObjectCounter store List<StoreOption> storeOptions = new ArrayList<StoreOption>(); // storeOptions.add(PersistentResourceOptions.EStoreOption.LOADED_OBJECT_COUNTER_LOGGING); storeOptions.add(MapResourceOptions.EStoreMapOption.AUTOCOMMIT); storeOptions.add(PersistentResourceOptions.EStoreOption.ESTRUCUTRALFEATURE_CACHING); storeOptions.add(PersistentResourceOptions.EStoreOption.IS_SET_CACHING); storeOptions.add(PersistentResourceOptions.EStoreOption.SIZE_CACHING); loadOpts.put(PersistentResourceOptions.STORE_OPTIONS, storeOptions); resource.load(loadOpts); { Runtime.getRuntime().gc(); long initialUsedMemory = Runtime.getRuntime().totalMemory() - Runtime.getRuntime().freeMemory(); LOG.log(Level.INFO, MessageFormat.format("Used memory before query: {0}", MessageUtil.byteCountToDisplaySize(initialUsedMemory))); LOG.log(Level.INFO, "Start query"); long begin = System.currentTimeMillis(); EList<ClassDeclaration> list = ASE2015JavaQueries.grabats09(resource); long end = System.currentTimeMillis(); LOG.log(Level.INFO, "End query"); LOG.log(Level.INFO, MessageFormat.format("Query result contains {0} elements", list.size())); LOG.log(Level.INFO, MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin))); Runtime.getRuntime().gc(); long finalUsedMemory = Runtime.getRuntime().totalMemory() - Runtime.getRuntime().freeMemory(); LOG.log(Level.INFO, MessageFormat.format("Used memory after query: {0}", MessageUtil.byteCountToDisplaySize(finalUsedMemory))); LOG.log(Level.INFO, MessageFormat.format("Memory use increase: {0}", MessageUtil.byteCountToDisplaySize(finalUsedMemory - initialUsedMemory))); } if (resource instanceof PersistentResourceImpl) { PersistentResourceImpl.shutdownWithoutUnload((PersistentResourceImpl) resource); } else { resource.unload(); } } catch (ParseException e) { MessageUtil.showError(e.toString()); MessageUtil.showError("Current arguments: " + Arrays.toString(args)); HelpFormatter formatter = new HelpFormatter(); formatter.printHelp("java -jar <this-file.jar>", options, true); } catch (Throwable e) { MessageUtil.showError(e.toString()); } }
From source file:fr.inria.atlanmod.kyanos.benchmarks.ase2015.NeoEMFGraphQueryInvisibleMethodDeclarations.java
public static void main(String[] args) { Options options = new Options(); Option inputOpt = OptionBuilder.create(IN); inputOpt.setArgName("INPUT"); inputOpt.setDescription("Input Kyanos resource directory"); inputOpt.setArgs(1);//from w ww . j a v a 2 s. c o m inputOpt.setRequired(true); Option inClassOpt = OptionBuilder.create(EPACKAGE_CLASS); inClassOpt.setArgName("CLASS"); inClassOpt.setDescription("FQN of EPackage implementation class"); inClassOpt.setArgs(1); inClassOpt.setRequired(true); Option optFileOpt = OptionBuilder.create(OPTIONS_FILE); optFileOpt.setArgName("FILE"); optFileOpt.setDescription("Properties file holding the options to be used in the Kyanos Resource"); optFileOpt.setArgs(1); options.addOption(inputOpt); options.addOption(inClassOpt); options.addOption(optFileOpt); CommandLineParser parser = new PosixParser(); try { PersistenceBackendFactoryRegistry.getFactories().put(NeoBlueprintsURI.NEO_GRAPH_SCHEME, new BlueprintsPersistenceBackendFactory()); CommandLine commandLine = parser.parse(options, args); URI uri = NeoBlueprintsURI.createNeoGraphURI(new File(commandLine.getOptionValue(IN))); Class<?> inClazz = NeoEMFGraphQueryInvisibleMethodDeclarations.class.getClassLoader() .loadClass(commandLine.getOptionValue(EPACKAGE_CLASS)); inClazz.getMethod("init").invoke(null); ResourceSet resourceSet = new ResourceSetImpl(); resourceSet.getResourceFactoryRegistry().getProtocolToFactoryMap() .put(NeoBlueprintsURI.NEO_GRAPH_SCHEME, PersistentResourceFactory.eINSTANCE); Resource resource = resourceSet.createResource(uri); Map<String, Object> loadOpts = new HashMap<String, Object>(); if (commandLine.hasOption(OPTIONS_FILE)) { Properties properties = new Properties(); properties.load(new FileInputStream(new File(commandLine.getOptionValue(OPTIONS_FILE)))); for (final Entry<Object, Object> entry : properties.entrySet()) { loadOpts.put((String) entry.getKey(), (String) entry.getValue()); } } // Add the LoadedObjectCounter store List<StoreOption> storeOptions = new ArrayList<StoreOption>(); // storeOptions.add(PersistentResourceOptions.EStoreOption.LOADED_OBJECT_COUNTER_LOGGING); storeOptions.add(BlueprintsResourceOptions.EStoreGraphOption.AUTOCOMMIT); loadOpts.put(PersistentResourceOptions.STORE_OPTIONS, storeOptions); System.out.println(loadOpts); resource.load(loadOpts); { Runtime.getRuntime().gc(); long initialUsedMemory = Runtime.getRuntime().totalMemory() - Runtime.getRuntime().freeMemory(); LOG.log(Level.INFO, MessageFormat.format("Used memory before query: {0}", MessageUtil.byteCountToDisplaySize(initialUsedMemory))); LOG.log(Level.INFO, "Start query"); long begin = System.currentTimeMillis(); EList<MethodDeclaration> list = ASE2015JavaQueries.getInvisibleMethodDeclarations(resource); long end = System.currentTimeMillis(); LOG.log(Level.INFO, "End query"); LOG.log(Level.INFO, MessageFormat.format("Query result contains {0} elements", list.size())); LOG.log(Level.INFO, MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin))); Runtime.getRuntime().gc(); long finalUsedMemory = Runtime.getRuntime().totalMemory() - Runtime.getRuntime().freeMemory(); LOG.log(Level.INFO, MessageFormat.format("Used memory after query: {0}", MessageUtil.byteCountToDisplaySize(finalUsedMemory))); LOG.log(Level.INFO, MessageFormat.format("Memory use increase: {0}", MessageUtil.byteCountToDisplaySize(finalUsedMemory - initialUsedMemory))); } if (resource instanceof PersistentResourceImpl) { PersistentResourceImpl.shutdownWithoutUnload((PersistentResourceImpl) resource); } else { resource.unload(); } } catch (ParseException e) { MessageUtil.showError(e.toString()); MessageUtil.showError("Current arguments: " + Arrays.toString(args)); HelpFormatter formatter = new HelpFormatter(); formatter.printHelp("java -jar <this-file.jar>", options, true); } catch (Throwable e) { MessageUtil.showError(e.toString()); } }
From source file:com.appeligo.responsetest.ServerResponseChecker.java
/** * @param args/*w ww . j ava 2 s . co m*/ */ public static void main(String[] args) { PatternLayout pattern = new PatternLayout("%d{ISO8601} %-5p [%-c{1} - %t] - %m%n"); ConsoleAppender consoleAppender = new ConsoleAppender(pattern); LevelRangeFilter infoFilter = new LevelRangeFilter(); infoFilter.setLevelMin(Level.INFO); consoleAppender.addFilter(infoFilter); BasicConfigurator.configure(consoleAppender); String configFile = "/etc/flip.tv/responsetest.xml"; if (args.length > 0) { if (args.length == 2 && args[0].equals("-config")) { configFile = args[1]; } else { log.error("Usage: java " + ServerResponseChecker.class.getName() + " [-config <xmlfile>]"); System.exit(1); } } try { XMLConfiguration config = new XMLConfiguration(configFile); logFile = config.getString("logFile", logFile); servlet = config.getString("servlet", servlet); timeoutSeconds = config.getLong("timeoutSeconds", timeoutSeconds); responseTimeThresholdSeconds = config.getLong("responseTimeThresholdSeconds", responseTimeThresholdSeconds); reporter = config.getString("reporter", reporter); smtpServer = config.getString("smtpServer", smtpServer); smtpUsername = config.getString("smtpUsername", smtpUsername); smtpPassword = config.getString("smtpPassword", smtpPassword); smtpDebug = config.getBoolean("smtpDebug", smtpDebug); mailTo = config.getString("mailTo", mailTo); } catch (ConfigurationException e) { e.printStackTrace(); } marker = logFile + ".mailed"; try { BasicConfigurator.configure(new RollingFileAppender(pattern, logFile, true)); } catch (IOException e1) { e1.printStackTrace(); } // Add email appender SMTPAppender mailme = new SMTPAppender(); LevelRangeFilter warnFilter = new LevelRangeFilter(); warnFilter.setLevelMin(Level.WARN); mailme.addFilter(warnFilter); mailme.setSMTPDebug(smtpDebug); mailme.setSMTPHost(smtpServer); mailme.setTo(mailTo); mailme.setFrom(reporter + " <" + smtpUsername + ">"); mailme.setBufferSize(1); mailme.setSubject(servlet + " Not Responding!"); mailme.setSMTPUsername(smtpUsername); mailme.setSMTPPassword(smtpPassword); mailme.setLayout(new SimpleLayout()); mailme.activateOptions(); mailme.setLayout(pattern); BasicConfigurator.configure(mailme); long before; ConnectionThread connectionThread = new ConnectionThread(); connectionThread.start(); synchronized (connectionThread) { connectionThread.setOkToGo(true); connectionThread.notifyAll(); before = System.currentTimeMillis(); long delay = timeoutSeconds * 1000; while (!done && delay > 0) { try { connectionThread.wait(delay); } catch (InterruptedException e) { // TODO Auto-generated catch block e.printStackTrace(); } delay -= (System.currentTimeMillis() - before); } } long after = System.currentTimeMillis(); responseMillis = after - before; String reportStatus = "Could not report"; try { StringBuilder sb = new StringBuilder(); sb.append(servlet + "/responsetest/report.action"); sb.append("?reporter=" + URLEncoder.encode(reporter)); sb.append("&status=" + URLEncoder.encode(status)); sb.append("&bytesRead=" + bytesRead); sb.append("&timedOut=" + (!done)); if (throwable == null) { sb.append("&exception=none"); } else { sb.append("&exception=" + URLEncoder.encode(throwable.getClass().getName() + "-" + throwable.getMessage())); } sb.append("&responseMillis=" + responseMillis); URL reportURL = new URL(sb.toString()); connection = (HttpURLConnection) reportURL.openConnection(); connection.connect(); reportStatus = connection.getResponseCode() + " - " + connection.getResponseMessage(); } catch (Throwable t) { reportStatus = t.getClass().getName() + "-" + t.getMessage(); } StringBuilder sb = new StringBuilder(); sb.append(servlet + ": "); sb.append(status + ", " + bytesRead + " bytes, "); if (done) { sb.append("DONE, "); } else { sb.append("TIMED OUT, "); } sb.append(responseMillis + " millisecond response, "); sb.append(" report status=" + reportStatus); File markerFile = new File(marker); if (done && status.startsWith("200") && (throwable == null)) { if ((responseMillis / 1000) < responseTimeThresholdSeconds) { if (markerFile.exists()) { markerFile.delete(); } log.debug(sb.toString()); } else { if (markerFile.exists()) { log.info(sb.toString()); } else { try { new FileOutputStream(marker).close(); log.warn(sb.toString()); } catch (IOException e) { log.info(sb.toString()); log.info("Can't send email alert because could not write marker file: " + marker + ". " + e.getMessage()); } } } } else { if (throwable != null) { StringWriter sw = new StringWriter(); PrintWriter pw = new PrintWriter(sw); throwable.printStackTrace(pw); sb.append(sw.toString()); } if (markerFile.exists()) { log.info(sb.toString()); } else { try { new FileOutputStream(marker).close(); log.fatal(sb.toString()); // chosen appender layout ignoresThrowable() } catch (IOException e) { log.info(sb.toString()); log.info("Can't send email alert because could not write marker file: " + marker + ". " + e.getMessage()); } } } }