List of usage examples for java.lang String toString
public String toString()
From source file:org.duracloud.snapshot.service.impl.RestoreJobExecutionListener.java
private void sendEmail(String subject, String msg, String... destinations) { notificationManager.sendNotification(NotificationType.EMAIL, subject, msg.toString(), destinations); log.info("sent email with subject=\"" + subject + "\" to " + StringUtils.join(destinations, ",")); }
From source file:cc.kave.episodes.export.StreamPartition.java
public Map<String, Integer> partition() throws ZipException, IOException { Map<String, Integer> mapping = Maps.newLinkedHashMap(); EventStreamGenerator generator = new EventStreamGenerator(); Map<Event, Integer> allEvents = getStream(); String zipName = ""; int partitionNo = 0; for (String zip : findZips()) { zipName = zip.toString(); if (REPO.equalsIgnoreCase("")) { partitionNo++;//w w w.ja va2 s. co m Logger.log("Partition %d", partitionNo); REPO = getRepoName(zipName); } if (!zipName.startsWith(REPO)) { mapping.put(REPO, partitionNo); REPO = getRepoName(zipName); storeStream(generator, allEvents, partitionNo); partitionNo++; Logger.log("Partition %d", partitionNo); generator = new EventStreamGenerator(); } ReadingArchive ra = rootDir.getReadingArchive(zip); while (ra.hasNext()) { Context ctx = ra.getNext(Context.class); if (ctx == null) { continue; } generator.add(ctx); } ra.close(); } Logger.log("Total number of partitions is: %d", partitionNo); storeStream(generator, allEvents, partitionNo); mapping.put(REPO, partitionNo); return mapping; }
From source file:BwaSingleAlignment.java
/** * Code to run in each one of the mappers. This is, the alignment with the corresponding entry data * The entry data has to be written into the local filesystem *//*w ww .j ava 2 s . co m*/ @Override public Iterator<String> call(Integer arg0, Iterator<String> arg1) throws Exception { LOG.info("JMAbuin:: Tmp dir: " + this.tmpDir); String fastqFileName1 = this.tmpDir + this.appId + "-RDD" + arg0 + "_1"; LOG.info("JMAbuin:: Writing file: " + fastqFileName1); File FastqFile1 = new File(fastqFileName1); FileOutputStream fos1; BufferedWriter bw1; ArrayList<String> returnedValues = new ArrayList<String>(); try { fos1 = new FileOutputStream(FastqFile1); bw1 = new BufferedWriter(new OutputStreamWriter(fos1)); String newFastqRead; while (arg1.hasNext()) { newFastqRead = arg1.next(); bw1.write(newFastqRead.toString()); bw1.newLine(); } bw1.close(); //We do not need the input data anymore, as it is written in a local file arg1 = null; returnedValues = this.runAlignmentProcess(arg0, fastqFileName1, null); // Delete the temporary file, as is have now been copied to the // output directory FastqFile1.delete(); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); LOG.error(e.toString()); } return returnedValues.iterator(); }
From source file:cc.kave.episodes.export.StreamPartition.java
private Map<Event, Integer> getStream() throws IOException { EventStreamGenerator generator = new EventStreamGenerator(); for (String zip : findZips()) { Logger.log("Reading zip file %s", zip.toString()); ReadingArchive ra = rootDir.getReadingArchive(zip); while (ra.hasNext()) { Context ctx = ra.getNext(Context.class); if (ctx == null) { continue; }// www. j a v a 2 s . c o m generator.add(ctx); } ra.close(); } List<Event> allEvents = generator.getEventStream(); EventStream complStream = EventsFilter.filterStream(allEvents, REMFREQS); EventStreamIo.write(complStream, getStreamPath(), getMappingPath()); return complStream.getMapping(); }
From source file:gov.va.vinci.leo.listener.CSVBaseListenerTest.java
@Test /**// ww w.j a v a2 s. c o m * Test NOT escaping quotes. */ public void testCharSepraratorQuoteCharNewLine() throws IOException { File f = File.createTempFile("testCharSepraratorQuoteCharNewLine", "txt"); TestCsvListener listener = new TestCsvListener(f, '-', '\'', "<CRLF>"); listener.entityProcessComplete(cas, null); String b = FileUtils.readFileToString(f).trim(); assertEquals("\'a\'-\'b\'-\'\"\"c\'<CRLF>", b.toString()); }
From source file:org.kuali.rice.krworkshop.RoutingAttributeSplitNode.java
protected String getDocumentId(RouteContext context) { final String documentID = context.getNodeInstance().getDocumentId(); return documentID != null ? documentID.toString() : null; }
From source file:org.openxdata.server.engine.OpenXDataLoggingEngineImpl.java
/** * Builds a {@link Diagnosis} from given <tt>Log File</tt> output. * /*from w ww . j a v a2 s . com*/ * @param logFileOutput <tt>Log File</tt> output to diagnose. * @return Instance of {@link Diagnosis}. */ private Diagnosis buildDiagnosisFromHTMLFileOutput(String logFileOutput) { Diagnosis diagnosis = new Diagnosis(); String logFileStream = logFileOutput.toString(); if (logFileStream != null) { // Retrieve Latest Error. String latestError = LoggingEngineUtil.getLatestError(logFileOutput); // Determine Risk Level. ErrorRiskLevel riskLevel = LoggingEngineUtil.determineErrorRiskLevel(logFileOutput); // Determine Diagnosed status. DiagnosedStatus status = LoggingEngineUtil.determineDiagnosedStatus(logFileOutput); int errorCount = Log4jHtmlParser.getErrorCount(logFileOutput); // Set Diagnosis properties. diagnosis.setRiskLevel(riskLevel); diagnosis.setDiagnosedStatus(status); diagnosis.setLatestError(latestError); diagnosis.setLogFileStream(logFileOutput); diagnosis.setErrorCount(errorCount); } return diagnosis; }
From source file:com.des.paperbase.ManageData.java
public JSONObject getJsonFromString(String input) throws ParseException { return (JSONObject) new JSONParser().parse(input.toString()); }
From source file:com.edgenius.wiki.render.handler.ImageHandler.java
public List<RenderPiece> handle(RenderContext renderContext, Map<String, String> values) throws RenderHandlerException { //~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ // Build ImageModel object, then render it String source = values.get(ImageFilter.SRC); values.remove(ImageFilter.SRC); ImageModel img = new ImageModel(); if (!source.toLowerCase().startsWith("http://") && !source.toLowerCase().startsWith("https://")) { //ok, this normal image render rather than draft preview etc(can see draft images), then remove all draft status attachments from list if (renderContext.getPageVisibleAttachments() == null && atts != null) { for (Iterator<FileNode> iter = atts.iterator(); iter.hasNext();) { FileNode node = iter.next(); if (node.getStatus() > 0) iter.remove();/* www . j av a 2 s .c o m*/ } } if (atts == null || atts.size() == 0) { throw new RenderHandlerException( "Image can not render because image repository can not find any attachment."); } img.filename = source; //try to find the image from repository for (FileNode node : atts) { if (StringUtils.equalsIgnoreCase(node.getFilename(), source)) { //found attachment img.url = renderContext.buildDownloadURL(node.getFilename(), node.getNodeUuid(), false); break; } } } else { img.url = source; } if (img.url == null) { log.info("Unable parse out external image url or unavailable image attachment from " + source); throw new RenderHandlerException( messageService.getMessage("render.image.not.found", new String[] { source })); } List<RenderPiece> pieces = new ArrayList<RenderPiece>(); //does not keep align as they are not standard <img> tag attributes img.align = values.remove(NameConstants.ALIGN); img.width = values.remove(NameConstants.WIDTH); img.height = values.remove(NameConstants.HEIGHT); img.title = values.remove(NameConstants.TITLE); img.attributes = values; //~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ // render ImageModel String imgBuf = img.toRichAjaxTag(); pieces.add(new TextModel(imgBuf.toString())); return pieces; }
From source file:com.logsniffer.fields.filter.support.SeverityMappingFilter.java
@Override protected SeverityLevel transform(final String sourceValue) { if (_levels == null) { resetInternalLevels();//from w w w. ja va 2 s.com } String strSource = sourceValue.toString().trim(); if (ignoreCase) { strSource = strSource.toLowerCase(); } final SeverityLevel mapping = _levels.get(strSource); return mapping; }