List of usage examples for java.lang String substring
public String substring(int beginIndex)
From source file:com.marklogic.client.tutorial.util.Bootstrapper.java
/** * Command-line invocation.//from w w w. j a v a2 s .c o m * @param args command-line arguments specifying the configuration and REST server */ public static void main(String[] args) throws ClientProtocolException, IOException, XMLStreamException, FactoryConfigurationError { Properties properties = new Properties(); for (int i = 0; i < args.length; i++) { String name = args[i]; if (name.startsWith("-") && name.length() > 1 && ++i < args.length) { name = name.substring(1); if ("properties".equals(name)) { InputStream propsStream = Bootstrapper.class.getClassLoader().getResourceAsStream(name); if (propsStream == null) throw new IOException("Could not read bootstrapper properties"); Properties props = new Properties(); props.load(propsStream); props.putAll(properties); properties = props; } else { properties.put(name, args[i]); } } else { System.err.println("invalid argument: " + name); System.err.println(getUsage()); System.exit(1); } } String invalid = joinList(listInvalidKeys(properties)); if (invalid != null && invalid.length() > 0) { System.err.println("invalid arguments: " + invalid); System.err.println(getUsage()); System.exit(1); } new Bootstrapper().makeServer(properties); System.out.println("Created " + properties.getProperty("restserver") + " server on " + properties.getProperty("restport") + " port for " + properties.getProperty("restdb") + " database"); }
From source file:com.marklogic.client.example.util.Bootstrapper.java
/** * Command-line invocation.//from w w w. j a va 2 s .c om * @param args command-line arguments specifying the configuration and REST server */ public static void main(String[] args) throws ClientProtocolException, IOException, FactoryConfigurationError { Properties properties = new Properties(); for (int i = 0; i < args.length; i++) { String name = args[i]; if (name.startsWith("-") && name.length() > 1 && ++i < args.length) { name = name.substring(1); if ("properties".equals(name)) { InputStream propsStream = Bootstrapper.class.getClassLoader().getResourceAsStream(name); if (propsStream == null) throw new IOException("Could not read bootstrapper properties"); Properties props = new Properties(); props.load(propsStream); props.putAll(properties); properties = props; } else { properties.put(name, args[i]); } } else { System.err.println("invalid argument: " + name); System.err.println(getUsage()); System.exit(1); } } String invalid = joinList(listInvalidKeys(properties)); if (invalid != null && invalid.length() > 0) { System.err.println("invalid arguments: " + invalid); System.err.println(getUsage()); System.exit(1); } // TODO: catch invalid argument exceptions and provide feedback new Bootstrapper().makeServer(properties); System.out.println("Created " + properties.getProperty("restserver") + " server on " + properties.getProperty("restport") + " port for " + properties.getProperty("restdb") + " database"); }
From source file:org.sbs.util.BinaryDateDwonLoader.java
/** * @param args/*from w w w .ja v a 2 s.c o m*/ */ public static void main(String[] args) { // TODO Auto-generated method stub String img = "http://apollo.s.dpool.sina.com.cn/nd/dataent/moviepic/pics/157/moviepic_8d48be1e004c5b05464a7a427d6722e4.jpg"; BinaryDateDwonLoader dateDwonLoader = BinaryDateDwonLoader.getInstance(); PageFetchResult result = dateDwonLoader.fetchHeader(img); try { OutputStream outputStream = new FileOutputStream( new File("d:\\" + img.substring(img.lastIndexOf('/') + 1))); result.getEntity().writeTo(outputStream); outputStream.close(); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (IOException e) { // TODO Auto-generated catch block e.printStackTrace(); } }
From source file:VerboseGC.java
public static void main(String[] args) { if (args.length < 1) { usage();// w ww . ja v a2 s . com } String hostname = ""; int port = -1; long interval = 5000; // default is 5 second interval long mins = 5; for (int argIndex = 0; argIndex < args.length; argIndex++) { String arg = args[argIndex]; if (args[argIndex].startsWith("-")) { if (arg.equals("-h") || arg.equals("-help") || arg.equals("-?")) { usage(); } else if (arg.startsWith("-interval=")) { try { interval = Integer.parseInt(arg.substring(10)) * 1000; } catch (NumberFormatException ex) { usage(); } } else if (arg.startsWith("-duration=")) { try { mins = Integer.parseInt(arg.substring(10)); } catch (NumberFormatException ex) { usage(); } } else { // Unknown switch System.err.println("Unrecognized option: " + arg); usage(); } } else { String[] arg2 = arg.split(":"); if (arg2.length != 2) { usage(); } hostname = arg2[0]; try { port = Integer.parseInt(arg2[1]); } catch (NumberFormatException x) { usage(); } if (port < 0) { usage(); } } } // get full thread dump and perform deadlock detection VerboseGC vgc = new VerboseGC(hostname, port); long samples = (mins * 60 * 1000) / interval; vgc.dump(interval, samples); }
From source file:com.seanmadden.net.fast.SerialInterface.java
public static void main(String[] args) { SerialInterface inter = new SerialInterface(new JSONObject()); inter.open();//from w w w . java 2s . co m System.out.println("Welcome. Commands with 'help'"); String cmd = ""; Scanner scan = new Scanner(System.in); do { System.out.print("> "); cmd = scan.nextLine(); if (cmd.toLowerCase().equals("help")) { System.out.println("Commands:"); System.out.println("help : prints this message"); System.out.println("send <message> : sends <message> to interpretype."); System.out.println("quit : exits this program"); } else if (cmd.toLowerCase().startsWith("send")) { String message = cmd.substring(cmd.toLowerCase().indexOf(' ') + 1); inter.sendDataToPort(message); } } while (!cmd.toLowerCase().equals("quit")); inter.close(); }
From source file:ListAlgorithms.java
public static void main(String[] args) { Security.addProvider(new org.bouncycastle.jce.provider.BouncyCastleProvider()); Provider[] providers = Security.getProviders(); Set<String> ciphers = new HashSet<String>(); Set<String> keyAgreements = new HashSet<String>(); Set<String> macs = new HashSet<String>(); Set<String> messageDigests = new HashSet<String>(); Set<String> signatures = new HashSet<String>(); Set<String> keyFactory = new HashSet<String>(); Set<String> keyPairGenerator = new HashSet<String>(); Set<String> keyGenerator = new HashSet<String>(); for (int i = 0; i != providers.length; i++) { Iterator it = providers[i].keySet().iterator(); while (it.hasNext()) { String entry = (String) it.next(); if (entry.startsWith("Alg.Alias.")) { entry = entry.substring("Alg.Alias.".length()); }//from ww w . j a v a2 s . com if (entry.startsWith("Cipher.")) { ciphers.add(entry.substring("Cipher.".length())); } else if (entry.startsWith("KeyAgreement.")) { keyAgreements.add(entry.substring("KeyAgreement.".length())); } else if (entry.startsWith("Mac.")) { macs.add(entry.substring("Mac.".length())); } else if (entry.startsWith("MessageDigest.")) { messageDigests.add(entry.substring("MessageDigest.".length())); } else if (entry.startsWith("Signature.")) { signatures.add(entry.substring("Signature.".length())); } else if (entry.startsWith("KeyPairGenerator.")) { keyPairGenerator.add(entry.substring("KeyPairGenerator.".length())); } else if (entry.startsWith("KeyFactory.")) { keyFactory.add(entry.substring("KeyFactory.".length())); } else if (entry.startsWith("KeyGenerator.")) { keyGenerator.add(entry.substring("KeyGenerator.".length())); } else { System.out.println(entry); } } } printSet("KeyGenerator", keyGenerator); printSet("KeyFactory", keyFactory); printSet("KeyPairGenerator", keyPairGenerator); printSet("Ciphers", ciphers); printSet("KeyAgreeents", keyAgreements); printSet("Macs", macs); printSet("MessageDigests", messageDigests); printSet("Signatures", signatures); }
From source file:ZipImploder.java
/** * Main command line entry point./* w ww.jav a 2 s.c o m*/ * * @param args */ public static void main(final String[] args) { if (args.length == 0) { printHelp(); System.exit(0); } String zipName = null; String jarName = null; String manName = null; String sourceDir = null; String leadDir = null; boolean jarActive = false, manActive = false, zipActive = false, sourceDirActive = false, leadDirActive = false; boolean verbose = false; boolean noDirs = false; // process arguments for (int i = 0; i < args.length; i++) { String arg = args[i]; if (arg.charAt(0) == '-') { // switch arg = arg.substring(1); if (arg.equalsIgnoreCase("jar")) { jarActive = true; manActive = false; zipActive = false; sourceDirActive = false; leadDirActive = false; } else if (arg.equalsIgnoreCase("manifest")) { jarActive = false; manActive = true; zipActive = false; sourceDirActive = false; leadDirActive = false; } else if (arg.equalsIgnoreCase("zip")) { zipActive = true; manActive = false; jarActive = false; sourceDirActive = false; leadDirActive = false; } else if (arg.equalsIgnoreCase("dir")) { jarActive = false; manActive = false; zipActive = false; sourceDirActive = true; leadDirActive = false; } else if (arg.equalsIgnoreCase("lead")) { jarActive = false; manActive = false; zipActive = false; sourceDirActive = false; leadDirActive = true; } else if (arg.equalsIgnoreCase("noDirs")) { noDirs = true; jarActive = false; manActive = false; zipActive = false; sourceDirActive = false; leadDirActive = false; } else if (arg.equalsIgnoreCase("verbose")) { verbose = true; jarActive = false; manActive = false; zipActive = false; sourceDirActive = false; leadDirActive = false; } else { reportError("Invalid switch - " + arg); } } else { if (jarActive) { if (jarName != null) { reportError("Duplicate value - " + arg); } jarName = arg; } else if (manActive) { if (manName != null) { reportError("Duplicate value - " + arg); } manName = arg; } else if (zipActive) { if (zipName != null) { reportError("Duplicate value - " + arg); } zipName = arg; } else if (sourceDirActive) { if (sourceDir != null) { reportError("Duplicate value - " + arg); } sourceDir = arg; } else if (leadDirActive) { if (leadDir != null) { reportError("Duplicate value - " + arg); } leadDir = arg; } else { reportError("Too many parameters - " + arg); } } } if (sourceDir == null || (zipName == null && jarName == null)) { reportError("Missing parameters"); } if (manName != null && zipName != null) { reportError("Manifests not supported on ZIP files"); } if (leadDir == null) { leadDir = new File(sourceDir).getAbsolutePath().replace('\\', '/') + '/'; } if (verbose) { System.out.println("Effective command: " + ZipImploder.class.getName() + (jarName != null ? " -jar " + jarName + (manName != null ? " -manifest " + manName : "") : "") + (zipName != null ? " -zip " + zipName : "") + " -dir " + sourceDir + " -lead " + leadDir + (noDirs ? " -noDirs" : "") + (verbose ? " -verbose" : "")); } try { ZipImploder zi = new ZipImploder(verbose); if (leadDir != null) { zi.setBaseDir(leadDir); } if (manName != null) { BufferedInputStream bis = new BufferedInputStream(new FileInputStream(manName)); try { zi.setManifest(new Manifest(bis)); } finally { bis.close(); } } zi.setIncludeDirs(!noDirs); zi.process(zipName, jarName, sourceDir); if (verbose) { System.out.println("\nDone Directories=" + zi.getDirCount() + " Files=" + zi.getFileCount()); } } catch (IOException ioe) { System.err.println("Exception - " + ioe.getMessage()); // ioe.printStackTrace(); // *** debug *** System.exit(2); } }
From source file:edu.duke.igsp.gkde.Main.java
public static void main(String[] argv) throws Exception { Options opts = new Options(); opts.addOption("s", true, "wiggle track step (default=1)"); opts.addOption("l", true, "feature length (default=600)"); opts.addOption("f", true, "fragment size (default=estimated from data)"); // opts.addOption("b", true, "bandwidth (default=200)"); // opts.addOption("w", true, "window (default=3800"); opts.addOption("wg", true, "wg threshold set (defualt = calculated)"); opts.addOption("c", true, "genomic total read weight (defualt = calculated)"); opts.addOption("h", false, "print usage"); opts.addOption(OptionBuilder.withArgName("input dir").hasArg() .withDescription("input directory (default=current directory)").isRequired(false).create("d")); opts.addOption(OptionBuilder.withArgName("output dir").hasArg() .withDescription("output directory (default=current directory)").isRequired(false).create("o")); opts.addOption(OptionBuilder.withArgName("background dir").hasArg() .withDescription("background directory (default=none)").isRequired(false).create("b")); opts.addOption(OptionBuilder.withArgName("ploidy dir").hasArg() .withDescription("ploidy/input directory (default=none)").isRequired(false).create("p")); opts.addOption(OptionBuilder.withArgName("wig | bed | npf").hasArg() .withDescription("output format (default wig)").isRequired(false).create("of")); opts.addOption(OptionBuilder.withArgName("dnase | chip | faire | atac").hasArg() .withDescription("input data").isRequired(true).create("in")); opts.addOption(OptionBuilder.withArgName("weight clip").hasArg() .withDescription("weight clip value (default none)").isRequired(false).create("wc")); opts.addOption("t", true, "threshold (standard deviations) (default=4.0)"); // opts.addOption("r", true, "background ratio (default=2.0)"); opts.addOption("v", false, "verbose output"); CommandLineParser parser = new GnuParser(); int fragment_size = -1; int fragment_offset = 0; long featureLength = 600l; // float thresh = 2; float threshold = KDEChromosome.Settings.DEFAULT_THRESHOLD; int step = 1; boolean showHelp = false; boolean verbose = false; String inputDirectory = null; String backgroundDirectory = null; String ploidyDirectory = null; String[] files = null;/*from w w w .j a v a2 s .co m*/ String[] bgfiles = {}; String[] ipfiles = {}; String outputFormat = "wig"; String inputDataType = "dnase"; File outputDirectory = new File(System.getProperty("user.dir")); long bandwidth = 0l; long window = 0l; double ncuts = 0.0d; float temp_threshold = 0f; int weight_clip = 0; System.out.println("F-Seq Version 1.85"); try { CommandLine cmd = parser.parse(opts, argv); showHelp = (cmd.hasOption("h")); verbose = (cmd.hasOption("v")); if (cmd.hasOption("s")) step = Integer.parseInt(cmd.getOptionValue("s")); if (cmd.hasOption("f")) fragment_size = Integer.parseInt(cmd.getOptionValue("f")); if (cmd.hasOption("d")) //input directory inputDirectory = cmd.getOptionValue("d"); if (cmd.hasOption("b")) //background directory backgroundDirectory = cmd.getOptionValue("b"); if (cmd.hasOption("p")) //ploidy|input directory ploidyDirectory = cmd.getOptionValue("p"); if (cmd.hasOption("l")) // bandwidth featureLength = Long.parseLong(cmd.getOptionValue("l")); if (cmd.hasOption("of")) { // output format outputFormat = cmd.getOptionValue("of"); if (!outputFormat.equals("wig") && !outputFormat.equals("bed") && !outputFormat.equals("npf")) { System.out.println("Parameter error: output format must be 'wig' or 'bed'."); showHelp = true; } } if (cmd.hasOption("in")) { // input data type inputDataType = cmd.getOptionValue("in"); if (!inputDataType.equals("dnase") && !inputDataType.equals("chip") && !inputDataType.equals("faire") && !inputDataType.equals("atac")) { System.out.println( "Parameter error: input data type must be 'dnase', 'chip', 'faire', or 'atac'."); showHelp = true; } } if (cmd.hasOption("wc")) { // weight clip weight_clip = Integer.parseInt(cmd.getOptionValue("wc")); } if (cmd.hasOption("t")) { // threshold (standard deviations) threshold = Float.parseFloat(cmd.getOptionValue("t")); } if (cmd.hasOption("o")) { // output directory String out = cmd.getOptionValue("o"); outputDirectory = new File(out); if (!outputDirectory.exists() && !outputDirectory.isDirectory()) { System.out.println("Output directory '" + out + "' is not a valid directory."); showHelp = true; } } if (cmd.hasOption("wg")) temp_threshold = Float.parseFloat(cmd.getOptionValue("wg")); if (cmd.hasOption("c")) ncuts = Double.parseDouble(cmd.getOptionValue("c")); // TESTING ONLY // if(cmd.hasOption("w")) // window // window = Long.parseLong(cmd.getOptionValue("w")); //if(cmd.hasOption("b")) // window // bandwidth = Long.parseLong(cmd.getOptionValue("b")); files = cmd.getArgs(); // input files //bgfiles = cmd.getArgs(); // background files } catch (Exception e) { System.out.println("Error parsing arguments: " + e.getMessage()); e.printStackTrace(); showHelp = true; } if (showHelp || (inputDirectory == null && files.length == 0)) { HelpFormatter formatter = new HelpFormatter(); formatter.printHelp("fseq [options]... [file(s)]...", opts); System.exit(1); } File[] pfiles = getFiles(inputDirectory, files); File[] background_files = getFiles(backgroundDirectory, bgfiles); File[] ploidy_files = getFiles(ploidyDirectory, ipfiles); KDEChromosome[] chrs = null; // assume all files are of the same type, if not we'll get parsing errors String path = pfiles[0].getPath(); String extension = path.substring(path.lastIndexOf('.')).toLowerCase(); System.out.println("Path: " + path + ", extension: " + extension); if (extension.equals(".bed")) { System.out.println("Parsing BED file."); chrs = BedReader.read(pfiles); } else if (extension.equals(".sam") || extension.equals(".bam")) { System.out.println("Parsing SAM/BAM file."); chrs = SamReader.read(pfiles, weight_clip); } //KDEChromosome[] input = BedReader.read(ifiles); //compute fragment offset if (fragment_size == -1) { fragment_size = wgShiftCalc(chrs); } fragment_offset = (int) (fragment_size / 2); if (ncuts == 0.0d) { for (int i = 0; i < chrs.length; ++i) { // computes the total read weight of all cuts on a chromosome ncuts += chrs[i].getTotalWeight(); } } KDEChromosome.Settings settings = null; if (bandwidth > 0 || window > 0) { settings = new KDEChromosome.Settings(bandwidth, window, threshold, fragment_offset, ncuts, inputDataType); } else { settings = new KDEChromosome.Settings(featureLength, threshold, fragment_offset, ncuts, inputDataType); } float wg_threshold = wgThreshold(settings, chrs); if (temp_threshold != 0f) { wg_threshold = temp_threshold; } //KDEChromosome.Settings bg_settings = null; //bg_settings = new KDEChromosome.Settings(featureLength*2, threshold, fragment_offset); //int background_size = 0; //int input_size = 0; //float bg_ratio = 0; //float sd = 0; if (verbose) { System.out.println("Settings: "); System.out.println("\twindow=" + (settings.window * 2)); System.out.println("\tbandwidth=" + (settings.bandwidth)); //System.out.println("\tfragment offset=" + (settings.offset)); System.out.println("\tthreshold = " + wg_threshold); System.out.println("\test. fragment size = " + fragment_size); System.out.println("\tsequence length = " + chrs[0].getSequenceLength()); } // if(backgroundDirectory != null) { // for(int i = 0; i < input.length; ++i) { // background_size += input[i].getLength(); // } // for(int i = 0; i < chrs.length; ++i) { // input_size += chrs[i].getLength(); // } // bg_ratio = (float)input_size/(float)background_size; // sd = computeSD(bg_settings, input); // //System.out.println("Sample Ratio: " + bg_ratio); // //System.out.println("Input Size: " + input_size); // //System.out.println("Background Size: " + background_size); // //System.out.println("Input standard deviation: " + (settings.threshold * (float)Math.sqrt((double)bg_ratio * (double)sd * (double)sd))); // //System.out.println("Data standard deviation: " + settings.threshold * computeSD(settings, chrs)); // } for (int i = 0; i < chrs.length; ++i) { if (chrs[i].getFirstPos() == chrs[i].getLastPos()) { System.out.println("Warning: " + chrs[i].getChromosome() + " has size zero. Skipping."); continue; } File ofile = Util.makeUniqueFileWithExtension(outputDirectory, chrs[i].getChromosome(), outputFormat); DensityWriter dw = null; if (outputFormat.equals("wig")) { dw = new WiggleDensityWriter(ofile, chrs[i].getChromosome(), chrs[i].getFirstPos(), step); } else { if (outputFormat.equals("npf")) { dw = new NpfDensityWriter(ofile, chrs[i].getChromosome(), chrs[i].getFirstPos(), step); } else { dw = new BedDensityWriter(ofile, chrs[i].getChromosome(), chrs[i].getFirstPos(), step); } } //Function takes all? or new function for each? // if(backgroundDirectory != null) { // boolean hit = false; // for(int j = 0; j < background_files.length; ++j) { // if(background_files[j].getName().equals(chrs[i].getChromosome() + ".bff")) { // System.out.println("Running background on Chromosome " + chrs[i].getChromosome()); // chrs[i].runBG(settings, dw, verbose, wg_threshold, background_files[j]); // hit = true; // } // } // if(!hit) // System.out.println("No background for Chromosome " + chrs[i].getChromosome()); // } else { // if(ploidyDirectory !=) // chrs[i].run(settings, dw, verbose, wg_threshold); // } chrs[i].run(settings, dw, verbose, wg_threshold, background_files, ploidy_files); dw.close(); } //kde.showGraph(); }
From source file:DateParse2.java
public static void main(String[] args) { //+/*ww w. j a v a 2 s.co m*/ SimpleDateFormat formatter = new SimpleDateFormat("yyyy-MM-dd"); String input[] = { "BD: 1913-10-01 Vancouver, B.C.", "MD: 1948-03-01 Ottawa, ON", "DD: 1983-06-06 Toronto, ON" }; for (int i = 0; i < input.length; i++) { String aLine = input[i]; String action; switch (aLine.charAt(0)) { case 'B': action = "Born"; break; case 'M': action = "Married"; break; case 'D': action = "Died"; break; // others... default: System.err.println("Invalid code in " + aLine); continue; } int p = aLine.indexOf(' '); ParsePosition pp = new ParsePosition(p); Date d = formatter.parse(aLine, pp); if (d == null) { System.err.println("Invalid date in " + aLine); continue; } String location = aLine.substring(pp.getIndex()); System.out.println(action + " on " + d + " in " + location); } //- }
From source file:CTmousetrack.java
public static void main(String[] args) { String outLoc = new String("." + File.separator + "CTdata"); // Location of the base output data folder; only used when writing out CT data to a local folder String srcName = "CTmousetrack"; // name of the output CT source long blockPts = 10; // points per block flush long sampInterval = 10; // time between sampling updates, msec double trimTime = 0.0; // amount of data to keep (trim time), sec boolean debug = false; // turn on debug? // Specify the CT output connection CTWriteMode writeMode = CTWriteMode.LOCAL; // The selected mode for writing out CT data String serverHost = ""; // Server (FTP or HTTP/S) host:port String serverUser = ""; // Server (FTP or HTTPS) username String serverPassword = ""; // Server (FTP or HTTPS) password // For UDP output mode DatagramSocket udpServerSocket = null; InetAddress udpServerAddress = null; String udpHost = ""; int udpPort = -1; // Concatenate all of the CTWriteMode types String possibleWriteModes = ""; for (CTWriteMode wm : CTWriteMode.values()) { possibleWriteModes = possibleWriteModes + ", " + wm.name(); }//from w w w. j ava2s .c o m // Remove ", " from start of string possibleWriteModes = possibleWriteModes.substring(2); // // Argument processing using Apache Commons CLI // // 1. Setup command line options Options options = new Options(); options.addOption("h", "help", false, "Print this message."); options.addOption(Option.builder("o").argName("base output dir").hasArg().desc( "Base output directory when writing data to local folder (i.e., this is the location of CTdata folder); default = \"" + outLoc + "\".") .build()); options.addOption(Option.builder("s").argName("source name").hasArg() .desc("Name of source to write data to; default = \"" + srcName + "\".").build()); options.addOption(Option.builder("b").argName("points per block").hasArg() .desc("Number of points per block; UDP output mode will use 1 point/block; default = " + Long.toString(blockPts) + ".") .build()); options.addOption(Option.builder("dt").argName("samp interval msec").hasArg() .desc("Sampling period in msec; default = " + Long.toString(sampInterval) + ".").build()); options.addOption(Option.builder("t").argName("trim time sec").hasArg().desc( "Trim (ring-buffer loop) time (sec); this is only used when writing data to local folder; specify 0 for indefinite; default = " + Double.toString(trimTime) + ".") .build()); options.addOption( Option.builder("w").argName("write mode").hasArg() .desc("Type of write connection; one of " + possibleWriteModes + "; all but UDP mode write out to CT; default = " + writeMode.name() + ".") .build()); options.addOption(Option.builder("host").argName("host[:port]").hasArg() .desc("Host:port when writing via FTP, HTTP, HTTPS, UDP.").build()); options.addOption(Option.builder("u").argName("username,password").hasArg() .desc("Comma-delimited username and password when writing to CT via FTP or HTTPS.").build()); options.addOption("x", "debug", false, "Enable CloudTurbine debug output."); // 2. Parse command line options CommandLineParser parser = new DefaultParser(); CommandLine line = null; try { line = parser.parse(options, args); } catch (ParseException exp) { // oops, something went wrong System.err.println("Command line argument parsing failed: " + exp.getMessage()); return; } // 3. Retrieve the command line values if (line.hasOption("help")) { // Display help message and quit HelpFormatter formatter = new HelpFormatter(); formatter.setWidth(120); formatter.printHelp("CTmousetrack", "", options, "NOTE: UDP output is a special non-CT output mode where single x,y points are sent via UDP to the specified host:port."); return; } outLoc = line.getOptionValue("o", outLoc); if (!outLoc.endsWith("\\") && !outLoc.endsWith("/")) { outLoc = outLoc + File.separator; } // Make sure the base output folder location ends in "CTdata" if (!outLoc.endsWith("CTdata\\") && !outLoc.endsWith("CTdata/")) { outLoc = outLoc + "CTdata" + File.separator; } srcName = line.getOptionValue("s", srcName); blockPts = Long.parseLong(line.getOptionValue("b", Long.toString(blockPts))); sampInterval = Long.parseLong(line.getOptionValue("dt", Long.toString(sampInterval))); trimTime = Double.parseDouble(line.getOptionValue("t", Double.toString(trimTime))); // Type of output connection String writeModeStr = line.getOptionValue("w", writeMode.name()); boolean bMatch = false; for (CTWriteMode wm : CTWriteMode.values()) { if (wm.name().toLowerCase().equals(writeModeStr.toLowerCase())) { writeMode = wm; bMatch = true; } } if (!bMatch) { System.err.println("Unrecognized write mode, \"" + writeModeStr + "\"; write mode must be one of " + possibleWriteModes); System.exit(0); } if (writeMode != CTWriteMode.LOCAL) { // User must have specified the host // If FTP or HTTPS, they may also specify username/password serverHost = line.getOptionValue("host", serverHost); if (serverHost.isEmpty()) { System.err.println( "When using write mode \"" + writeModeStr + "\", you must specify the server host."); System.exit(0); } if (writeMode == CTWriteMode.UDP) { // Force blockPts to be 1 blockPts = 1; // User must have specified both host and port int colonIdx = serverHost.indexOf(':'); if ((colonIdx == -1) || (colonIdx >= serverHost.length() - 1)) { System.err.println( "For UDP output mode, both the host and port (<host>:<port>)) must be specified."); System.exit(0); } udpHost = serverHost.substring(0, colonIdx); String udpPortStr = serverHost.substring(colonIdx + 1); try { udpPort = Integer.parseInt(udpPortStr); } catch (NumberFormatException nfe) { System.err.println("The UDP port must be a positive integer."); System.exit(0); } } if ((writeMode == CTWriteMode.FTP) || (writeMode == CTWriteMode.HTTPS)) { String userpassStr = line.getOptionValue("u", ""); if (!userpassStr.isEmpty()) { // This string should be comma-delimited username and password String[] userpassCSV = userpassStr.split(","); if (userpassCSV.length != 2) { System.err.println("When specifying a username and password for write mode \"" + writeModeStr + "\", separate the username and password by a comma."); System.exit(0); } serverUser = userpassCSV[0]; serverPassword = userpassCSV[1]; } } } debug = line.hasOption("debug"); System.err.println("CTmousetrack parameters:"); System.err.println("\toutput mode = " + writeMode.name()); if (writeMode == CTWriteMode.UDP) { System.err.println("\twrite to " + udpHost + ":" + udpPort); } else { System.err.println("\tsource = " + srcName); System.err.println("\ttrim time = " + trimTime + " sec"); } System.err.println("\tpoints per block = " + blockPts); System.err.println("\tsample interval = " + sampInterval + " msec"); try { // // Setup CTwriter or UDP output // CTwriter ctw = null; CTinfo.setDebug(debug); if (writeMode == CTWriteMode.LOCAL) { ctw = new CTwriter(outLoc + srcName, trimTime); System.err.println("\tdata will be written to local folder \"" + outLoc + "\""); } else if (writeMode == CTWriteMode.FTP) { CTftp ctftp = new CTftp(srcName); try { ctftp.login(serverHost, serverUser, serverPassword); } catch (Exception e) { throw new IOException( new String("Error logging into FTP server \"" + serverHost + "\":\n" + e.getMessage())); } ctw = ctftp; // upcast to CTWriter System.err.println("\tdata will be written to FTP server at " + serverHost); } else if (writeMode == CTWriteMode.HTTP) { // Don't send username/pw in HTTP mode since they will be unencrypted CThttp cthttp = new CThttp(srcName, "http://" + serverHost); ctw = cthttp; // upcast to CTWriter System.err.println("\tdata will be written to HTTP server at " + serverHost); } else if (writeMode == CTWriteMode.HTTPS) { CThttp cthttp = new CThttp(srcName, "https://" + serverHost); // Username/pw are optional for HTTPS mode; only use them if username is not empty if (!serverUser.isEmpty()) { try { cthttp.login(serverUser, serverPassword); } catch (Exception e) { throw new IOException(new String( "Error logging into HTTP server \"" + serverHost + "\":\n" + e.getMessage())); } } ctw = cthttp; // upcast to CTWriter System.err.println("\tdata will be written to HTTPS server at " + serverHost); } else if (writeMode == CTWriteMode.UDP) { try { udpServerSocket = new DatagramSocket(); } catch (SocketException se) { System.err.println("Error creating socket for UDP:\n" + se); System.exit(0); } try { udpServerAddress = InetAddress.getByName(udpHost); } catch (UnknownHostException uhe) { System.err.println("Error getting UDP server host address:\n" + uhe); System.exit(0); } } if (writeMode != CTWriteMode.UDP) { ctw.setBlockMode(blockPts > 1, blockPts > 1); ctw.autoFlush(0); // no autoflush ctw.autoSegment(1000); } // screen dims Dimension screenSize = Toolkit.getDefaultToolkit().getScreenSize(); double width = screenSize.getWidth(); double height = screenSize.getHeight(); // use Map for consolidated putData Map<String, Object> cmap = new LinkedHashMap<String, Object>(); // loop and write some output for (int i = 0; i < 1000000; i++) { // go until killed long currentTime = System.currentTimeMillis(); Point mousePos = MouseInfo.getPointerInfo().getLocation(); float x_pt = (float) (mousePos.getX() / width); // normalize float y_pt = (float) ((height - mousePos.getY()) / height); // flip Y (so bottom=0) if (writeMode != CTWriteMode.UDP) { // CT output mode ctw.setTime(currentTime); cmap.clear(); cmap.put("x", x_pt); cmap.put("y", y_pt); ctw.putData(cmap); if (((i + 1) % blockPts) == 0) { ctw.flush(); System.err.print("."); } } else { // UDP output mode // We force blockPts to be 1 for UDP output mode, i.e. we "flush" the data every time // Write the following data (21 bytes total): // header = "MOUSE", 5 bytes // current time, long, 8 bytes // 2 floats (x,y) 4 bytes each, 8 bytes int len = 21; ByteBuffer bb = ByteBuffer.allocate(len); String headerStr = "MOUSE"; bb.put(headerStr.getBytes("UTF-8")); bb.putLong(currentTime); bb.putFloat(x_pt); bb.putFloat(y_pt); // Might be able to use the following, but not sure: // byte[] sendData = bb.array(); byte[] sendData = new byte[len]; bb.position(0); bb.get(sendData, 0, len); DatagramPacket sendPacket = new DatagramPacket(sendData, sendData.length, udpServerAddress, udpPort); try { udpServerSocket.send(sendPacket); } catch (IOException e) { System.err.println("Test server caught exception trying to send data to UDP client:\n" + e); } System.err.print("."); } try { Thread.sleep(sampInterval); } catch (Exception e) { } ; } if (writeMode != CTWriteMode.UDP) { ctw.flush(); // wrap up } } catch (Exception e) { System.err.println("CTmousetrack exception: " + e); e.printStackTrace(); } }