List of usage examples for java.io Writer append
public Writer append(char c) throws IOException
From source file:com.laxser.blitz.web.portal.impl.DefaultPipeRender.java
@Override public void render(Writer out, Window window) throws IOException { JSONObject json = new JSONObject(); json.put("content", window.getContent()); json.put("id", window.getName()); // javascript JSONArray js = getAttributeAsArray(window, PipeImpl.WINDIW_JS); if (js != null && js.length() > 0) { json.put("js", js); }/*from w w w . j a va 2 s. c o m*/ // css JSONArray css = getAttributeAsArray(window, PipeImpl.WINDOW_CSS); if (css != null && css.length() > 0) { json.put("css", css); } out.append("<script type=\"text/javascript\">"); out.append("blitzpipe.addWindow("); out.append(json.toString()); out.append(");"); out.append("</script>"); out.append('\n'); }
From source file:org.structr.rest.RestMethodResult.java
public void commitResponse(final Gson gson, final HttpServletResponse response) { // set headers for (Entry<String, String> header : headers.entrySet()) { response.setHeader(header.getKey(), header.getValue()); }/*from w ww.j a v a 2 s .c om*/ // set response code response.setStatus(responseCode); try { Writer writer = response.getWriter(); if (content != null) { // create result set Result result = new Result(this.content, this.content.size(), this.content.size() > 1 || serializeSingleObjectAsCollection, serializeAsPrimitiveArray); // serialize result set gson.toJson(result, writer); } if (content == null) { writer.append(jsonMessage(responseCode, message)); } // add newline writer.append("\n"); //writer.flush(); //writer.close(); } catch (JsonIOException | IOException t) { logger.log(Level.WARNING, "Unable to commit HttpServletResponse", t); } }
From source file:com.github.rvesse.airline.help.html.HtmlCommandUsageGenerator.java
/** * Outputs a documentation section detailing an allowed value for an option * // w ww . j a va 2 s . com * @param writer * Writer * @param option * Option meta-data * @param restriction * Restriction * @param hint * Help hint * @throws IOException */ protected void outputOptionRestriction(Writer writer, OptionMetadata option, OptionRestriction restriction, HelpHint hint) throws IOException { writer.append("<div class=\"row\">\n"); writer.append("<div class=\"span8 offset3\">\n"); // Append preamble if present if (!StringUtils.isEmpty(hint.getPreamble())) { writer.append(htmlize(hint.getPreamble())); writer.append(NEWLINE); } if (hint.numContentBlocks() > 0) { // Append help content switch (hint.getFormat()) { case EXAMPLES: // Treat as code examples String[] examples = hint.getContentBlock(0); for (int i = 0; i < examples.length; i++) { writer.append("<pre>"); writer.append(examples[i]); writer.append("</pre>").append(NEWLINE); for (int j = 1; j < hint.numContentBlocks(); j++) { String[] explanations = hint.getContentBlock(j); if (i < explanations.length) { writer.append("<p>").append(NEWLINE); writer.append(htmlize(explanations[i])); writer.append("</p>").append(NEWLINE); } } } break; case LIST: // Treat as a list writer.append("<ul>").append(NEWLINE); for (String item : hint.getContentBlock(0)) { writer.append("<li>"); writer.append(htmlize(item)); writer.append("</li>").append(NEWLINE); } writer.append("</ul>"); break; case TABLE: case TABLE_WITH_HEADERS: // Find max rows boolean useHeaders = hint.getFormat() == HelpFormat.TABLE_WITH_HEADERS; int maxRows = 0; for (int col = 0; col < hint.numContentBlocks(); col++) { maxRows = Math.max(maxRows, hint.getContentBlock(col).length); } writer.append("<table>").append(NEWLINE); // Output table rows for (int row = 0; row < maxRows; row++) { writer.append("<tr>").append(NEWLINE); for (int col = 0; col < hint.numContentBlocks(); col++) { String[] colData = hint.getContentBlock(col); writer.append(useHeaders ? "<th>" : "<td>"); if (row < colData.length) { writer.append(htmlize(colData[row])); } writer.append(useHeaders ? "</th>" : "</td>"); writer.append(NEWLINE); } useHeaders = false; writer.append("</tr>").append(NEWLINE); } writer.append("</table>").append(NEWLINE); break; default: // Treat as paragraphs of text for (int i = 0; i < hint.numContentBlocks(); i++) { for (String para : hint.getContentBlock(i)) { writer.append("<p>").append(NEWLINE); writer.append(htmlize(para)); writer.append("</p>").append(NEWLINE); } } break; } } writer.append("</div>\n"); writer.append("</div>\n"); }
From source file:org.genedb.web.mvc.controller.SequenceDistributorController.java
@RequestMapping(method = RequestMethod.GET, value = "/{name}/{type}/{destination}") public void process(HttpServletResponse response, @PathVariable(value = "name") String uniqueName, @PathVariable(value = "destination") String destination, @PathVariable(value = "type") String sequenceType) throws IOException { Writer writer = response.getWriter(); response.setContentType("text/html"); Feature feature = sequenceDao.getFeatureByUniqueName(uniqueName, Feature.class); if (feature == null) { writer.append(String.format("Failed to find feature '%s'", uniqueName)); //be.reject("no.results"); //return showForm(request, response, be); return; // FIXME }/*from w w w . j a v a 2 s.co m*/ Transcript transcript = modelBuilder.findTranscriptForFeature(feature); String sequence = null; String sequence2 = null; boolean nucleotide = true; String program = "wublastn"; SequenceType st = SequenceType.valueOf(sequenceType); switch (st) { case GENE_SEQUENCE: sequence = transcript.getGene().getResidues(); sequence2 = getSequence(transcript, GeneSection.TRANSCRIPTIONAL_START, 0, GeneSection.POLY_A, 0, true, true); compareSequences(sequence, sequence2); break; case TRANSCRIPT: sequence = transcript.getResidues(); sequence2 = getSequence(transcript, GeneSection.TRANSCRIPTIONAL_START, 0, GeneSection.POLY_A, 0, true, false); compareSequences(sequence, sequence2); break; case CDS: sequence = transcript.getResidues(); sequence2 = getSequence(transcript, GeneSection.START_CODON, 0, GeneSection.STOP_CODON, 0, true, false); compareSequences(sequence, sequence2); break; case PROTEIN: if (transcript instanceof ProductiveTranscript) { Polypeptide pp = ((ProductiveTranscript) transcript).getProtein(); if (pp != null) { sequence = pp.getResidues(); if (sequence.endsWith("*")) { sequence = sequence.substring(0, sequence.length() - 1); } nucleotide = false; } } program = "wublastx"; } String unsplitSequence = sequence; // sequence = splitSequenceIntoLines(sequence); SequenceDestination sd = SequenceDestination.valueOf(destination); switch (sd) { case BLAST: String uri = String.format("%s/%s", LOCAL_BLAST, "GeneDB_" + transcript.getOrganism().getCommonName()); Map<String, String> parameters = new Hashtable<String, String>(); parameters.put("sequence", sequence); parameters.put("blast_type", program); writer.append(postForm(uri, parameters)); break; // String returnable = String.format("redirect:%s/%s?sequence=%s&blast_type=%s", // LOCAL_BLAST, // "GeneDB_" + transcript.getOrganism().getCommonName(), // sequence, // program // ); // // // logger.error(returnable); // return returnable; case OMNIBLAST: String uri2 = String.format("%s/%s", LOCAL_BLAST, nucleotide ? "GeneDB_transcripts/omni" : "GeneDB_proteins/omni"); Map<String, String> parameters2 = new Hashtable<String, String>(); parameters2.put("sequence", sequence); parameters2.put("blast_type", program); writer.append(postForm(uri2, parameters2)); break; // return String.format("redirect:%s/%s?sequence=%s&blast_type=%s", // LOCAL_BLAST, // nucleotide ? "GeneDB_transcripts/omni" : "GeneDB_proteins/omni", // sequence, // program // ); case NCBI_BLAST: String uri3 = "http://blast.ncbi.nlm.nih.gov/Blast.cgi"; Map<String, String> parameters3 = new Hashtable<String, String>(); parameters3.put("PAGE_TYPE", "BlastSearch"); parameters3.put("SHOW_DEFAULTS", "on"); parameters3.put("LINK_LOC", "blasthome"); if (nucleotide) { parameters3.put("PROGRAM", "blastn"); parameters3.put("BLAST_PROGRAMS", "megaBlast"); parameters3.put("DBTYPE", "gc"); parameters3.put("DATABASE", "nr"); } else { parameters3.put("PROGRAM", "blastp"); parameters3.put("BLAST_PROGRAMS", "blastp"); } parameters3.put("QUERY", unsplitSequence); writer.append(postForm(uri3, parameters3)); break; // return String.format("redirect:%s&%s&QUERY=%s", // "http://blast.ncbi.nlm.nih.gov/Blast.cgi?PAGE_TYPE=BlastSearch&SHOW_DEFAULTS=on&LINK_LOC=blasthome", // nucleotide ? // "PROGRAM=blastn&BLAST_PROGRAMS=megaBlast&DBTYPE=gc&DATABASE=nr" // : "PROGRAM=blastp&BLAST_PROGRAMS=blastp", // sequence // ); default: throw new RuntimeException("Unknown sequence destination"); } }
From source file:com.github.rvesse.airline.help.html.HtmlCommandUsageGenerator.java
/** * Outputs a documentation section detailing the options * /*from ww w . j a v a2s .c o m*/ * @param writer * Writer * @param options * Option meta-data * @throws IOException */ protected <T> void outputOptions(Writer writer, List<OptionMetadata> options, ArgumentsMetadata arguments, ParserMetadata<T> parserConfig) throws IOException { writer.append(NEWLINE); writer.append("<h1 class=\"text-info\">OPTIONS</h1>\n").append(NEWLINE); for (OptionMetadata option : options) { // skip hidden options if (option.isHidden() && !this.includeHidden()) { continue; } // Option names writer.append("<div class=\"row\">\n"); writer.append("<div class=\"span8 offset1\">\n"); writer.append(htmlize(toDescription(option))); writer.append("</div>\n"); writer.append("</div>\n"); // Description writer.append("<div class=\"row\">\n"); writer.append("<div class=\"span8 offset2\">\n"); writer.append(htmlize(option.getDescription())); writer.append("</div>\n"); writer.append("</div>\n"); // Allowed values for (OptionRestriction restriction : option.getRestrictions()) { if (restriction instanceof HelpHint) { outputOptionRestriction(writer, option, restriction, (HelpHint) restriction); } } } if (arguments != null) { // Arguments separator writer.append("<div class=\"row\">\n"); writer.append("<div class=\"span8 offset1\">\n"); writer.append(parserConfig.getArgumentsSeparator()).append("\n"); writer.append("</div>\n"); writer.append("</div>\n"); // description writer.append("<div class=\"row\">\n"); writer.append("<div class=\"span8 offset2\">\n"); writer.append("This option can be used to separate command-line options from the " + "list of argument, (useful when arguments might be mistaken for command-line options)\n"); writer.append("</div>\n"); writer.append("</div>\n"); // arguments name writer.append("<div class=\"row\">\n"); writer.append("<div class=\"span8 offset1\">\n"); writer.append(htmlize(toDescription(arguments))); writer.append("</div>\n"); writer.append("</div>\n"); // description writer.append("<div class=\"row\">\n"); writer.append("<div class=\"span8 offset2\">\n"); writer.append(htmlize(arguments.getDescription())); writer.append("</div>\n"); writer.append("</div>\n"); } }
From source file:org.apache.mahout.utils.SequenceFileDumper.java
@Override public int run(String[] args) throws Exception { addInputOption();// w w w.ja va 2s. co m addOutputOption(); addOption("substring", "b", "The number of chars to print out per value", false); addOption(buildOption("count", "c", "Report the count only", false, false, null)); addOption("numItems", "n", "Output at most <n> key value pairs", false); addOption( buildOption("facets", "fa", "Output the counts per key. Note, if there are a lot of unique keys, " + "this can take up a fair amount of memory", false, false, null)); addOption(buildOption("quiet", "q", "Print only file contents.", false, false, null)); if (parseArguments(args, false, true) == null) { return -1; } Path[] pathArr; Configuration conf = new Configuration(); Path input = getInputPath(); FileSystem fs = input.getFileSystem(conf); if (fs.getFileStatus(input).isDir()) { pathArr = FileUtil.stat2Paths(fs.listStatus(input, PathFilters.logsCRCFilter())); } else { pathArr = new Path[1]; pathArr[0] = input; } Writer writer; boolean shouldClose; if (hasOption("output")) { shouldClose = true; writer = Files.newWriter(new File(getOption("output")), Charsets.UTF_8); } else { shouldClose = false; writer = new OutputStreamWriter(System.out, Charsets.UTF_8); } try { for (Path path : pathArr) { if (!hasOption("quiet")) { writer.append("Input Path: ").append(String.valueOf(path)).append('\n'); } int sub = Integer.MAX_VALUE; if (hasOption("substring")) { sub = Integer.parseInt(getOption("substring")); } boolean countOnly = hasOption("count"); SequenceFileIterator<?, ?> iterator = new SequenceFileIterator<>(path, true, conf); if (!hasOption("quiet")) { writer.append("Key class: ").append(iterator.getKeyClass().toString()); writer.append(" Value Class: ").append(iterator.getValueClass().toString()).append('\n'); } OpenObjectIntHashMap<String> facets = null; if (hasOption("facets")) { facets = new OpenObjectIntHashMap<>(); } long count = 0; if (countOnly) { while (iterator.hasNext()) { Pair<?, ?> record = iterator.next(); String key = record.getFirst().toString(); if (facets != null) { facets.adjustOrPutValue(key, 1, 1); //either insert or add 1 } count++; } writer.append("Count: ").append(String.valueOf(count)).append('\n'); } else { long numItems = Long.MAX_VALUE; if (hasOption("numItems")) { numItems = Long.parseLong(getOption("numItems")); if (!hasOption("quiet")) { writer.append("Max Items to dump: ").append(String.valueOf(numItems)).append("\n"); } } while (iterator.hasNext() && count < numItems) { Pair<?, ?> record = iterator.next(); String key = record.getFirst().toString(); writer.append("Key: ").append(key); String str = record.getSecond().toString(); writer.append(": Value: ").append(str.length() > sub ? str.substring(0, sub) : str); writer.write('\n'); if (facets != null) { facets.adjustOrPutValue(key, 1, 1); //either insert or add 1 } count++; } if (!hasOption("quiet")) { writer.append("Count: ").append(String.valueOf(count)).append('\n'); } } if (facets != null) { List<String> keyList = new ArrayList<>(facets.size()); IntArrayList valueList = new IntArrayList(facets.size()); facets.pairsSortedByKey(keyList, valueList); writer.append("-----Facets---\n"); writer.append("Key\t\tCount\n"); int i = 0; for (String key : keyList) { writer.append(key).append("\t\t").append(String.valueOf(valueList.get(i++))).append('\n'); } } } writer.flush(); } finally { if (shouldClose) { Closeables.close(writer, false); } } return 0; }
From source file:com.serphacker.serposcope.db.base.ExportDB.java
public boolean export(Writer writer) throws IOException { for (String resource : MigrationDB.DB_SCHEMA_FILES) { String sql = new String(ByteStreams.toByteArray(MigrationDB.class.getResourceAsStream(resource))); sql = sql.replaceAll("--.*\n", "\n"); sql = sql.replaceAll("\\s+", " "); sql = sql.replaceAll(";\\s*", ";\n"); writer.append(sql); writer.append("\n"); }/*from w ww . jav a2 s . c o m*/ writer.append("\nSET FOREIGN_KEY_CHECKS=0;\n"); try (Connection con = ds.getConnection()) { for (String table : TABLES) { writer.flush(); try (Statement stmt = con.createStatement()) { LOG.info("exporting table {}", table); long _start = System.currentTimeMillis(); stmt.setQueryTimeout(3600 * 24); ResultSet rs = stmt.executeQuery("SELECT * FROM `" + table + "`"); ResultSetMetaData metaData = rs.getMetaData(); int columns = metaData.getColumnCount(); String insertStatement = "INSERT INTO `" + table + "` VALUES "; StringBuilder stmtBuilder = new StringBuilder(insertStatement); while (rs.next()) { StringBuilder entryBuilder = new StringBuilder("("); for (int colIndex = 1; colIndex <= columns; colIndex++) { Object object = rs.getObject(colIndex); String colName = metaData.getColumnName(colIndex); String colClassName = metaData.getColumnClassName(colIndex); String escaped = escape(object, colClassName, colName); entryBuilder.append(escaped); if (colIndex < columns) { entryBuilder.append(','); } } entryBuilder.append("),"); if (stmtBuilder.length() != insertStatement.length() && stmtBuilder.length() + entryBuilder.length() > DEFAULT_MAX_ALLOWED_PACKET) { stmtBuilder.setCharAt(stmtBuilder.length() - 1, ';'); writer.append(stmtBuilder).append('\n'); stmtBuilder = new StringBuilder(insertStatement); } stmtBuilder.append(entryBuilder); } if (stmtBuilder.length() != insertStatement.length()) { stmtBuilder.setCharAt(stmtBuilder.length() - 1, ';'); writer.append(stmtBuilder).append('\n'); } LOG.info("exported table {} in {}", table, DurationFormatUtils.formatDurationHMS(System.currentTimeMillis() - _start)); } } writer.append("SET FOREIGN_KEY_CHECKS=1;\n"); } catch (Exception ex) { LOG.error("SQL error", ex); return false; } return true; }
From source file:org.openqa.selenium.firefox.FirefoxProfile.java
protected void writeNewPrefs(File userPrefs, Map<String, String> prefs) { Writer writer = null; try {/* ww w . j a v a 2 s .c om*/ writer = new FileWriter(userPrefs); for (Map.Entry<String, String> entry : prefs.entrySet()) { writer.append(String.format("user_pref(\"%s\", %s);\n", entry.getKey(), entry.getValue())); } } catch (IOException e) { throw new WebDriverException(e); } finally { Cleanly.close(writer); } }
From source file:org.sonar.plugins.csharp.gendarme.profiles.GendarmeProfileExporter.java
private void appendRuleParams(Writer writer, List<ActiveRule> assemblyRules) throws IOException { for (ActiveRule activeRule : assemblyRules) { List<ActiveRuleParam> params = activeRule.getActiveRuleParams(); for (ActiveRuleParam param : params) { String key = activeRule.getConfigKey(); String ruleName = StringUtils.substringBefore(key, "@"); String propertyName = param.getRuleParam().getKey(); String propertyValue = param.getValue(); writer.append(" <parameter rule=\""); writer.append(ruleName);//from w w w . j a v a2 s.c om writer.append("\" property=\""); writer.append(propertyName); writer.append("\" value=\""); writer.append(propertyValue); writer.append("\" />\n"); } } }
From source file:org.sablo.IndexPageEnhancer.java
/** * Enhance the provided index.html//from w w w. j a v a 2s. c om * @param resource url to index.html * @param contextPath the path to express in base tag * @param cssContributions possible css contributions * @param jsContributions possible js contributions * @param variableSubstitution replace variables * @param writer the writer to write to * @throws IOException */ public static void enhance(URL resource, String contextPath, Collection<String> cssContributions, Collection<String> jsContributions, Map<String, String> variableSubstitution, Writer writer, IContributionFilter contributionFilter) throws IOException { String index_file = IOUtils.toString(resource); String lowercase_index_file = index_file.toLowerCase(); int headstart = lowercase_index_file.indexOf("<head>"); int headend = lowercase_index_file.indexOf(COMPONENT_CONTRIBUTIONS); //use real html parser here instead? if (variableSubstitution != null) { for (String variableName : variableSubstitution.keySet()) { String variableReplace = VAR_START + variableName + VAR_END; index_file = index_file.replaceAll(Matcher.quoteReplacement(variableReplace), variableSubstitution.get(variableName)); } } StringBuilder sb = new StringBuilder(index_file); if (headend < 0) { log.warn("Could not find marker for component contributions: " + COMPONENT_CONTRIBUTIONS + " for resource " + resource); } else { sb.insert(headend + COMPONENT_CONTRIBUTIONS.length(), getAllContributions(cssContributions, jsContributions, contributionFilter)); } if (headstart < 0) { log.warn("Could not find empty head tag for base tag for resource " + resource); } else { sb.insert(headstart + 6, getBaseTag(contextPath)); } writer.append(sb); }