List of usage examples for java.io RandomAccessFile close
public void close() throws IOException
From source file:com.bigdata.dastor.io.SSTableReader.java
private static MappedByteBuffer mmap(String filename, long start, int size) throws IOException { RandomAccessFile raf; try {/*from w w w. j a va2s.com*/ raf = new RandomAccessFile(filename, "r"); } catch (FileNotFoundException e) { throw new IOError(e); } try { return raf.getChannel().map(FileChannel.MapMode.READ_ONLY, start, size); } finally { raf.close(); } }
From source file:edu.harvard.i2b2.analysis.queryClient.CRCQueryClient.java
private static void testWriteTableFile(String result) { StringBuilder resultFile = new StringBuilder(); try {//from w ww .j a v a 2 s .c om PDOResponseMessageModel pdoresponsefactory = new PDOResponseMessageModel(); PatientSet patientDimensionSet = pdoresponsefactory.getPatientSetFromResponseXML(result); if (patientDimensionSet != null) { log.debug("Total patient: " + patientDimensionSet.getPatient().size()); for (int i = 0; i < patientDimensionSet.getPatient().size(); i++) { PatientType patientType = patientDimensionSet.getPatient().get(i); log.debug("PatientNum: " + patientType.getPatientId()); // + ","+patientType.getRaceCd() // +","+patientType.getSexCd() // +","+patientType.getAgeInYearsNum() // +","+patientType.getVitalStatusCd()); resultFile.append(patientType.getPatientId()); // +","+patientType.getRaceCd() // +","+patientType.getSexCd() // +","+patientType.getAgeInYearsNum() // +","+patientType.getVitalStatusCd()+"\n"); } } /* * List<PatientDataType.ObservationFactSet> factSets = * pdoresponsefactory.getFactSetsFromResponseXML(result); * * for(int j=0; j<factSets.size(); j++) { * PatientDataType.ObservationFactSet observationFactSet = * factSets.get(j); * //pdoresponsefactory.getFactSetFromResponseXML(result); if * (observationFactSet != null) { * log.debug("Total fact: "+observationFactSet * .getObservationFact().size() * +" for "+observationFactSet.getPath() * +"-"+observationFactSet.getConceptName()); for(int i=0; * i<observationFactSet.getObservationFact().size(); i++) { * ObservationFactType obsFactType = * observationFactSet.getObservationFact().get(i); * log.debug("PatientNum: "+obsFactType.getPatientNum() * +" concept_cd: " + obsFactType.getConceptCd() +" start_date: " + * obsFactType.getStartDate().getYear() * +"_"+obsFactType.getStartDate().getMonth() * +"_"+obsFactType.getStartDate().getDay() * +"_"+obsFactType.getNvalNum() +"_"+obsFactType.getConceptCd() * +"_"+obsFactType.getPatientNum()); } } } */ String tableFile = "C:\\tableview\\data\\patienttable.txt"; File oDelete = new File(tableFile); if (oDelete != null) oDelete.delete(); RandomAccessFile f = new RandomAccessFile(tableFile, "rw"); TimelineFactory.append(f, "PatientNumber,Race,Sex,Age,Dead\n"); TimelineFactory.append(f, resultFile.toString()); f.close(); /* * log.debug("\nTesting lld:"); for(int i=0; * i<patientDimensionSet.getPatientDimension().size();i++) { * PatientDimensionType patientType = * patientDimensionSet.getPatientDimension().get(i); Integer pnum = * patientType.getPatientNum(); log.debug("PatientNum: " + * patientType.getPatientNum()); * * for(int j=0; j<factSets.size(); j++) { * PatientDataType.ObservationFactSet observationFactSet = * factSets.get(j); String path = observationFactSet.getPath(); * StringBuilder resultString = new StringBuilder(); int total = 0; * XMLGregorianCalendar curStartDate = null; for(int k=0; * k<observationFactSet.getObservationFact().size(); k++) { * ObservationFactType obsFactType = * observationFactSet.getObservationFact().get(k); * * if(pnum.intValue() == obsFactType.getPatientNum().intValue()) { * if((curStartDate != null) && * (obsFactType.getStartDate().compare(curStartDate) == * DatatypeConstants.EQUAL)) { continue; } * * resultString.append("PatientNum: "+obsFactType.getPatientNum() * //+" for "+path +" concept_cd: " + obsFactType.getConceptCd() * +" start_date: " + obsFactType.getStartDate().getYear() * +"_"+obsFactType.getStartDate().getMonth() * +"_"+obsFactType.getStartDate().getDay() * +"_"+obsFactType.getStartDate().getHour() * +":"+obsFactType.getStartDate().getMinute() * +"_"+obsFactType.getNvalNum() +"_"+obsFactType.getConceptCd() * +"_"+obsFactType.getPatientNum() * +"_"+obsFactType.getEndDate()+"\n"); total++; curStartDate = * obsFactType.getStartDate(); } } * * log.debug("-- "+path+" has "+total+" events"); * log.debug(resultString.toString()); } } */ } catch (Exception e) { e.printStackTrace(); } }
From source file:ValidateLicenseHeaders.java
/** * Replace a legacy jboss header with the current default header * //w w w. j a v a 2s .c o m * @param javaFile - * the java source file * @param endOfHeader - * the offset to the end of the legacy header * @throws IOException - * thrown on failure to replace the header */ static void replaceHeader(File javaFile, long endOfHeader) throws IOException { if (log.isLoggable(Level.FINE)) log.fine("Replacing legacy jboss header in: " + javaFile); RandomAccessFile raf = new RandomAccessFile(javaFile, "rw"); File bakFile = new File(javaFile.getAbsolutePath() + ".bak"); FileOutputStream fos = new FileOutputStream(bakFile); fos.write(DEFAULT_HEADER.getBytes()); FileChannel fc = raf.getChannel(); long count = raf.length() - endOfHeader; fc.transferTo(endOfHeader, count, fos.getChannel()); fc.close(); fos.close(); raf.close(); if (javaFile.delete() == false) log.severe("Failed to delete java file: " + javaFile); if (bakFile.renameTo(javaFile) == false) throw new SyncFailedException("Failed to replace: " + javaFile); }
From source file:se.bitcraze.crazyflielib.bootloader.Bootloader.java
public static byte[] readFile(File file) throws IOException { byte[] fileData = new byte[(int) file.length()]; Logger logger = LoggerFactory.getLogger("Bootloader"); logger.debug("readFile: " + file.getName() + ", size: " + file.length()); RandomAccessFile raf = null; try {//from w w w . j a v a 2 s .co m raf = new RandomAccessFile(file.getAbsoluteFile(), "r"); raf.readFully(fileData); } finally { if (raf != null) { try { raf.close(); } catch (IOException ioe) { logger.error(ioe.getMessage()); } } } return fileData; }
From source file:com.aliyun.oss.integrationtests.TestUtils.java
public static String genFixedLengthFile(long fixedLength) throws IOException { ensureDirExist(TestBase.UPLOAD_DIR); String filePath = TestBase.UPLOAD_DIR + System.currentTimeMillis(); RandomAccessFile raf = new RandomAccessFile(filePath, "rw"); FileChannel fc = raf.getChannel(); MappedByteBuffer mbb = fc.map(MapMode.READ_WRITE, 0, fixedLength); try {/*from ww w .j a va2 s .c o m*/ for (int i = 0; i < fixedLength; i++) { mbb.put(pickupAlphabet()); } return filePath; } finally { if (fc != null) { fc.close(); } if (raf != null) { raf.close(); } } }
From source file:count.ly.messaging.CrashDetails.java
private static long getTotalRAM() { if (totalMemory == 0) { RandomAccessFile reader = null; String load = null;/*from ww w . j a v a 2 s. co m*/ try { reader = new RandomAccessFile("/proc/meminfo", "r"); load = reader.readLine(); // Get the Number value from the string Pattern p = Pattern.compile("(\\d+)"); Matcher m = p.matcher(load); String value = ""; while (m.find()) { value = m.group(1); } reader.close(); totalMemory = Long.parseLong(value) / 1024; } catch (IOException ex) { ex.printStackTrace(); } } return totalMemory; }
From source file:in.bbat.license.LicenseManager.java
public static void cleanupOlderLicenseFiles() { File localFile1 = new File(""); File[] arrayOfFile1 = localFile1.listFiles(new FilenameFilter() { public boolean accept(File paramAnonymousFile, String paramAnonymousString) { return paramAnonymousString.endsWith(".license.lock"); }//w w w .j a v a 2 s . co m }); for (File localFile2 : arrayOfFile1) { FileLock localFileLock = null; RandomAccessFile localRandomAccessFile = null; try { localRandomAccessFile = new RandomAccessFile(localFile2, "rw"); localFileLock = localRandomAccessFile.getChannel().tryLock(); } catch (Exception localException) { localFileLock = null; } if (localFileLock != null) { try { localFileLock.release(); localRandomAccessFile.close(); } catch (IOException localIOException1) { LOG.error("Error releasing an acquired lock. No problem, continuing!"); } String str = null; try { str = FileUtils.readFileToString(localFile2); returnOlderLicense(str); localFile2.delete(); } catch (IOException localIOException2) { LOG.error("Error returning an older license that is no longer valid. No problem, continuing!"); } } } }
From source file:com.aliyun.oss.integrationtests.TestUtils.java
public static String genRandomLengthFile() throws IOException { ensureDirExist(TestBase.UPLOAD_DIR); String filePath = TestBase.UPLOAD_DIR + System.currentTimeMillis(); RandomAccessFile raf = new RandomAccessFile(filePath, "rw"); FileChannel fc = raf.getChannel(); long fileLength = rand.nextInt(MAX_RANDOM_LENGTH); MappedByteBuffer mbb = fc.map(MapMode.READ_WRITE, 0, fileLength); try {//w w w. j a v a2 s . c o m for (int i = 0; i < fileLength; i++) { mbb.put(pickupAlphabet()); } return filePath; } finally { if (fc != null) { fc.close(); } if (raf != null) { raf.close(); } } }
From source file:dk.netarkivet.common.utils.cdx.BinSearch.java
/** Given a file in sorted order and a prefix to search for, return a * an iterable that will return the lines in the files that start with * the prefix, in order. They will be read lazily from the file. * * If no matches are found, it will still return an iterable with no * entries.// www .ja va 2s . co m * * @param file A CDX file to search in. * @param prefix The line prefix to search for. * @return An Iterable object that will return the lines * matching the prefix in the file. */ public static Iterable<String> getLinesInFile(File file, String prefix) { try { RandomAccessFile in = null; try { in = new RandomAccessFile(file, "r"); long matchingline = binSearch(in, prefix); if (matchingline == -1) { // Simple empty Iterable return Collections.emptyList(); } long firstMatching = findFirstLine(in, prefix, matchingline); return new PrefixIterable(file, firstMatching, prefix); } finally { if (in != null) { in.close(); } } } catch (IOException e) { String message = "IOException reading file '" + file + "'"; log.warn(message, e); throw new IOFailure(message, e); } }
From source file:de.ailis.wlandsuite.htds.Htds.java
/** * Returns the offsets of the tileset MSQ blocks in the specified file. * The offsets are determined by reading the raw data of each block and * looking at the position in the file./* w w w .java2s. co m*/ * * @param file * The file * @return The offsets * @throws IOException * When file operation fails. */ public static List<Integer> getMsqOffsets(final File file) throws IOException { List<Integer> offsets; RandomAccessFile access; FileInputStream stream; MsqHeader header; long offset; byte[] dummy; HuffmanInputStream huffmanStream; offsets = new ArrayList<Integer>(); access = new RandomAccessFile(file, "r"); try { stream = new FileInputStream(access.getFD()); offset = 0; while ((header = MsqHeader.read(stream)) != null) { offsets.add(Integer.valueOf((int) offset)); huffmanStream = new HuffmanInputStream(stream); dummy = new byte[header.getSize()]; huffmanStream.read(dummy); offset = access.getFilePointer(); } } finally { access.close(); } return offsets; }