List of usage examples for java.io PrintWriter println
public void println()
From source file:edu.cornell.med.icb.goby.reads.ColorSpaceConverter.java
public static void main(final String[] args) throws JSAPException, IOException { final JSAP jsap = new JSAP(); final FlaggedOption sequenceOption = new FlaggedOption("input"); sequenceOption.setRequired(true);//from www . ja va 2 s.co m sequenceOption.setLongFlag("input"); sequenceOption.setShortFlag('i'); sequenceOption.setStringParser(FileStringParser.getParser().setMustBeFile(true).setMustExist(true)); sequenceOption.setHelp("The input file (in Fasta format) to convert"); jsap.registerParameter(sequenceOption); final FlaggedOption outputOption = new FlaggedOption("output"); outputOption.setRequired(false); outputOption.setLongFlag("output"); outputOption.setShortFlag('o'); outputOption.setStringParser(FileStringParser.getParser().setMustBeFile(true)); outputOption.setHelp("The output file to write to (default = stdout)"); jsap.registerParameter(outputOption); final FlaggedOption titleOption = new FlaggedOption("title"); titleOption.setRequired(false); titleOption.setLongFlag("title"); titleOption.setShortFlag('t'); titleOption.setHelp("Title for this conversion"); jsap.registerParameter(titleOption); final Switch verboseOption = new Switch("verbose"); verboseOption.setLongFlag("verbose"); verboseOption.setShortFlag('v'); verboseOption.setHelp("Verbose output"); jsap.registerParameter(verboseOption); final Switch helpOption = new Switch("help"); helpOption.setLongFlag("help"); helpOption.setShortFlag('h'); helpOption.setHelp("Print this message"); jsap.registerParameter(helpOption); jsap.setUsage("Usage: " + ColorSpaceConverter.class.getName() + " " + jsap.getUsage()); final JSAPResult result = jsap.parse(args); if (result.getBoolean("help")) { System.out.println(jsap.getHelp()); System.exit(0); } if (!result.success()) { final Iterator<String> errors = result.getErrorMessageIterator(); while (errors.hasNext()) { System.err.println(errors.next()); } System.err.println(jsap.getUsage()); System.exit(1); } final boolean verbose = result.getBoolean("verbose"); final File sequenceFile = result.getFile("input"); if (verbose) { System.out.println("Reading sequence from: " + sequenceFile); } // extract the title to use for the output header final String title; if (result.contains("title")) { title = result.getString("title"); } else { title = sequenceFile.getName(); } Reader inputReader = null; PrintWriter outputWriter = null; try { if ("gz".equals(FilenameUtils.getExtension(sequenceFile.getName()))) { inputReader = new InputStreamReader(new GZIPInputStream(FileUtils.openInputStream(sequenceFile))); } else { inputReader = new FileReader(sequenceFile); } final FastaParser fastaParser = new FastaParser(inputReader); final File outputFile = result.getFile("output"); final OutputStream outputStream; if (outputFile != null) { outputStream = FileUtils.openOutputStream(outputFile); if (verbose) { System.out.println("Writing sequence : " + outputFile); } } else { outputStream = System.out; } outputWriter = new PrintWriter(outputStream); // write the header portion of the output outputWriter.print("# "); outputWriter.print(new Date()); outputWriter.print(' '); outputWriter.print(ColorSpaceConverter.class.getName()); for (final String arg : args) { outputWriter.print(' '); outputWriter.print(arg); } outputWriter.println(); outputWriter.print("# Cwd: "); outputWriter.println(new File(".").getCanonicalPath()); outputWriter.print("# Title: "); outputWriter.println(title); // now parse the input sequence long sequenceCount = 0; final MutableString descriptionLine = new MutableString(); final MutableString sequence = new MutableString(); final MutableString colorSpaceSequence = new MutableString(); while (fastaParser.hasNext()) { fastaParser.next(descriptionLine, sequence); outputWriter.print('>'); outputWriter.println(descriptionLine); convert(sequence, colorSpaceSequence); CompactToFastaMode.writeSequence(outputWriter, colorSpaceSequence); sequenceCount++; if (verbose && sequenceCount % 10000 == 0) { System.out.println("Converted " + sequenceCount + " entries"); } } if (verbose) { System.out.println("Conversion complete!"); } } finally { IOUtils.closeQuietly(inputReader); IOUtils.closeQuietly(outputWriter); } }
From source file:com.ifeng.sorter.NginxApp.java
public static void main(String[] args) { String input = "src/test/resources/data/nginx_report.txt"; PrintWriter pw = null; Map<String, List<LogBean>> resultMap = new HashMap<String, List<LogBean>>(); List<String> ips = new ArrayList<String>(); try {/* w ww .jav a 2 s . co m*/ List<String> lines = FileUtils.readLines(new File(input)); List<LogBean> items = new ArrayList<LogBean>(); for (String line : lines) { String[] values = line.split("\t"); if (values != null && values.length == 3) {// ip total seria try { String ip = values[0].trim(); String total = values[1].trim(); String seria = values[2].trim(); LogBean bean = new LogBean(ip, Integer.parseInt(total), seria); items.add(bean); } catch (NumberFormatException e) { e.printStackTrace(); } } } Collections.sort(items); for (LogBean bean : items) { String key = bean.getIp(); if (resultMap.containsKey(key)) { resultMap.get(key).add(bean); } else { List<LogBean> keyList = new ArrayList<LogBean>(); keyList.add(bean); resultMap.put(key, keyList); ips.add(key); } } pw = new PrintWriter("src/test/resources/output/result.txt", "UTF-8"); for (String ip : ips) { List<LogBean> list = resultMap.get(ip); for (LogBean bean : list) { pw.append(bean.toString()); pw.println(); } } } catch (IOException e) { e.printStackTrace(); } finally { pw.flush(); pw.close(); } }
From source file:Main.java
private static void writeFile(String filePath, String content) throws IOException { FileWriter fw = new FileWriter(filePath); PrintWriter out = new PrintWriter(fw); out.write(content);//from w w w . j a va2s .co m out.println(); fw.close(); out.close(); }
From source file:com.kaaprotech.satu.util.CmdLineUtil.java
public static String getCommandLineUsageMessage() { final HelpFormatter formatter = new HelpFormatter(); final StringWriter sw = new StringWriter(); final PrintWriter pw = new PrintWriter(sw, true); pw.println(); formatter.printHelp(pw, 120, "Satu", null, getOptions(), 2, 10, null); return sw.getBuffer().toString(); }
From source file:com.azaptree.services.spring.application.SpringApplicationService.java
private static void validate(final String[] args) { if (args.length == 0) { final StringWriter sw = new StringWriter(256); final PrintWriter pw = new PrintWriter(sw); pw.println(); pw.println(StringUtils.repeat("=", 160)); pw.println(// w w w . j av a2 s. com "Usage: java com.azaptree.services.spring.application.SpringApplicationService <config.xml>"); pw.println(); pw.println( " where <config.xml> = XML file location (loaded using Spring ResourceLoader) that must validate against spring-application-service.xsd"); pw.println(StringUtils.repeat("=", 160)); throw new IllegalArgumentException(sw.toString()); } }
From source file:PrintWriterDemo.java
public static void main() throws Exception { PrintWriter pw = new PrintWriter(new FileWriter("dice.txt")); for (int i = 1; i <= 1000; i++) { int die = (int) (1 + 6 * Math.random()); pw.print(die);//from w w w .ja va2 s .c o m pw.print(' '); if (i % 20 == 0) pw.println(); } pw.println(); pw.close(); // Without this, the output file may be empty }
From source file:de.tudarmstadt.ukp.dkpro.c4corpus.hadoop.statistics.StatisticsTableCreator.java
public static void saveTableToCsv(Table<String, String, Long> table, OutputStream outputStream) { PrintWriter pw = new PrintWriter(outputStream); pw.write(";"); for (String columnKey : table.columnKeySet()) { pw.printf("%s;", columnKey); }/*from ww w. j a va 2s . co m*/ pw.println(); for (String rowKey : table.rowKeySet()) { pw.printf("%s;", rowKey); for (String columnKey : table.columnKeySet()) { Long value = table.get(rowKey, columnKey); pw.printf("%d;", value != null ? value : 0); } pw.println(); } IOUtils.closeQuietly(pw); }
From source file:Main.java
public static String toString(Throwable e) { StringWriter w = new StringWriter(); PrintWriter p = new PrintWriter(w); p.print(e.getClass().getName() + ": "); if (e.getMessage() != null) { p.print(e.getMessage() + "\n"); }/*from w ww .j av a 2 s . c om*/ p.println(); try { e.printStackTrace(p); return w.toString(); } finally { p.close(); } }
From source file:Main.java
/** * make throwable to string.//from w w w.j a va 2 s .com */ public static String toString(Throwable throwable) { StringWriter stringWriter = new StringWriter(); PrintWriter printWriter = new PrintWriter(stringWriter); printWriter.print(throwable.getClass().getName() + ": "); if (throwable.getMessage() != null) { printWriter.print(throwable.getMessage() + "\n"); } printWriter.println(); try { throwable.printStackTrace(printWriter); return stringWriter.toString(); } finally { printWriter.close(); } }
From source file:com.amazonaws.eclipse.core.diagnostic.utils.AwsPortalFeedbackFormUtils.java
public static String getStackTraceFromThrowable(Throwable t) { StringWriter sw = new StringWriter(); PrintWriter pw = new PrintWriter(sw); t.printStackTrace(pw);//from w w w .jav a2 s .co m pw.println(); if (t.getCause() != null) { t.getCause().printStackTrace(pw); } return sw.toString(); }