List of usage examples for java.io File getAbsolutePath
public String getAbsolutePath()
From source file:net.jradius.client.gui.JRadiusSimulator.java
/** * Launches this application/*from ww w . j av a 2 s . c o m*/ */ public static void main(String[] args) { System.setProperty("org.apache.commons.logging.LogFactory", "net.jradius.client.gui.LogFactory"); if (args.length > 0) { String url = args[0]; File file = new File(url); if (file.exists()) url = "file:///" + file.getAbsolutePath(); JRadiusSimulator.setConfigFileUrl(url); } JRadiusSimulator application = new JRadiusSimulator(); application.setVisible(true); }
From source file:ch.kostceco.tools.kostsimy.KOSTSimy.java
/** Die Eingabe besteht aus 2 Parameter: [0] Original-Ordner [1] Replica-Ordner * // w w w .j a v a2 s . co m * @param args * @throws IOException */ public static void main(String[] args) throws IOException { ApplicationContext context = new ClassPathXmlApplicationContext("classpath:config/applicationContext.xml"); // Zeitstempel Start java.util.Date nowStart = new java.util.Date(); java.text.SimpleDateFormat sdfStart = new java.text.SimpleDateFormat("dd.MM.yyyy HH:mm:ss"); String ausgabeStart = sdfStart.format(nowStart); KOSTSimy kostsimy = (KOSTSimy) context.getBean("kostsimy"); File configFile = new File("configuration" + File.separator + "kostsimy.conf.xml"); // Ueberprfung des Parameters (Log-Verzeichnis) String pathToLogfile = kostsimy.getConfigurationService().getPathToLogfile(); File directoryOfLogfile = new File(pathToLogfile); if (!directoryOfLogfile.exists()) { directoryOfLogfile.mkdir(); } // Im Logverzeichnis besteht kein Schreibrecht if (!directoryOfLogfile.canWrite()) { System.out.println( kostsimy.getTextResourceService().getText(ERROR_LOGDIRECTORY_NOTWRITABLE, directoryOfLogfile)); System.exit(1); } if (!directoryOfLogfile.isDirectory()) { System.out.println(kostsimy.getTextResourceService().getText(ERROR_LOGDIRECTORY_NODIRECTORY)); System.exit(1); } // Ist die Anzahl Parameter (2) korrekt? if (args.length > 3) { System.out.println(kostsimy.getTextResourceService().getText(ERROR_PARAMETER_USAGE)); System.exit(1); } File origDir = new File(args[0]); File repDir = new File(args[1]); File logDatei = null; logDatei = origDir; // Informationen zum Arbeitsverzeichnis holen String pathToWorkDir = kostsimy.getConfigurationService().getPathToWorkDir(); /* Nicht vergessen in "src/main/resources/config/applicationContext-services.xml" beim * entsprechenden Modul die property anzugeben: <property name="configurationService" * ref="configurationService" /> */ // Konfiguration des Loggings, ein File Logger wird zustzlich erstellt LogConfigurator logConfigurator = (LogConfigurator) context.getBean("logconfigurator"); String logFileName = logConfigurator.configure(directoryOfLogfile.getAbsolutePath(), logDatei.getName()); File logFile = new File(logFileName); // Ab hier kann ins log geschrieben werden... LOGGER.logError(kostsimy.getTextResourceService().getText(MESSAGE_XML_HEADER)); LOGGER.logError(kostsimy.getTextResourceService().getText(MESSAGE_XML_START, ausgabeStart)); LOGGER.logError(kostsimy.getTextResourceService().getText(MESSAGE_XML_END)); LOGGER.logError(kostsimy.getTextResourceService().getText(MESSAGE_XML_INFO)); System.out.println("KOST-Simy"); System.out.println(""); if (!origDir.exists()) { // Das Original-Verzeichnis existiert nicht LOGGER.logError(kostsimy.getTextResourceService().getText(ERROR_IOE, kostsimy.getTextResourceService().getText(ERROR_NOORIGDIR, origDir.getAbsolutePath()))); System.out .println(kostsimy.getTextResourceService().getText(ERROR_NOORIGDIR, origDir.getAbsolutePath())); System.exit(1); } if (!repDir.exists()) { // Das Replica-Verzeichnis existiert nicht LOGGER.logError(kostsimy.getTextResourceService().getText(ERROR_IOE, kostsimy.getTextResourceService().getText(ERROR_NOREPDIR1, repDir.getAbsolutePath()))); System.out .println(kostsimy.getTextResourceService().getText(ERROR_NOREPDIR1, repDir.getAbsolutePath())); System.exit(1); } File xslOrig = new File("resources" + File.separator + "kost-simy.xsl"); File xslCopy = new File(directoryOfLogfile.getAbsolutePath() + File.separator + "kost-simy.xsl"); if (!xslCopy.exists()) { Util.copyFile(xslOrig, xslCopy); } // Informationen zur prozentualen Stichprobe holen String randomTest = kostsimy.getConfigurationService().getRandomTest(); /* Nicht vergessen in "src/main/resources/config/applicationContext-services.xml" beim * entsprechenden Modul die property anzugeben: <property name="configurationService" * ref="configurationService" /> */ int iRandomTest = 100; try { iRandomTest = Integer.parseInt(randomTest); } catch (Exception ex) { // unzulaessige Eingabe --> 50 wird gesetzt iRandomTest = 50; } if (iRandomTest > 100 || iRandomTest < 1) { // unzulaessige Eingabe --> 50 wird gesetzt iRandomTest = 50; } File tmpDir = new File(pathToWorkDir); /* bestehendes Workverzeichnis Abbruch wenn nicht leer, da am Schluss das Workverzeichnis * gelscht wird und entsprechend bestehende Dateien gelscht werden knnen */ if (tmpDir.exists()) { if (tmpDir.isDirectory()) { // Get list of file in the directory. When its length is not zero the folder is not empty. String[] files = tmpDir.list(); if (files.length > 0) { LOGGER.logError(kostsimy.getTextResourceService().getText(ERROR_IOE, kostsimy.getTextResourceService().getText(ERROR_WORKDIRECTORY_EXISTS, pathToWorkDir))); System.out.println( kostsimy.getTextResourceService().getText(ERROR_WORKDIRECTORY_EXISTS, pathToWorkDir)); System.exit(1); } } } // Im Pfad keine Sonderzeichen Programme knnen evtl abstrzen String patternStr = "[^!#\\$%\\(\\)\\+,\\-_\\.=@\\[\\]\\{\\}\\~:\\\\a-zA-Z0-9 ]"; Pattern pattern = Pattern.compile(patternStr); String name = tmpDir.getAbsolutePath(); String[] pathElements = name.split("/"); for (int i = 0; i < pathElements.length; i++) { String element = pathElements[i]; Matcher matcher = pattern.matcher(element); boolean matchFound = matcher.find(); if (matchFound) { LOGGER.logError(kostsimy.getTextResourceService().getText(ERROR_IOE, kostsimy.getTextResourceService().getText(ERROR_SPECIAL_CHARACTER, name))); System.out.println(kostsimy.getTextResourceService().getText(ERROR_SPECIAL_CHARACTER, name)); System.exit(1); } } // die Anwendung muss mindestens unter Java 6 laufen String javaRuntimeVersion = System.getProperty("java.vm.version"); if (javaRuntimeVersion.compareTo("1.6.0") < 0) { LOGGER.logError(kostsimy.getTextResourceService().getText(ERROR_IOE, kostsimy.getTextResourceService().getText(ERROR_WRONG_JRE))); System.out.println(kostsimy.getTextResourceService().getText(ERROR_WRONG_JRE)); System.exit(1); } // bestehendes Workverzeichnis wieder anlegen if (!tmpDir.exists()) { tmpDir.mkdir(); File origDirTmp = new File(tmpDir.getAbsolutePath() + File.separator + "orig"); File repDirTmp = new File(tmpDir.getAbsolutePath() + File.separator + "rep"); origDirTmp.mkdir(); repDirTmp.mkdir(); } // Im workverzeichnis besteht kein Schreibrecht if (!tmpDir.canWrite()) { LOGGER.logError(kostsimy.getTextResourceService().getText(ERROR_IOE, kostsimy.getTextResourceService().getText(ERROR_WORKDIRECTORY_NOTWRITABLE, tmpDir))); System.out.println(kostsimy.getTextResourceService().getText(ERROR_WORKDIRECTORY_NOTWRITABLE, tmpDir)); System.exit(1); } // Im Pfad keine Sonderzeichen --> Absturzgefahr name = origDir.getAbsolutePath(); pathElements = name.split("/"); for (int i = 0; i < pathElements.length; i++) { String element = pathElements[i]; Matcher matcher = pattern.matcher(element); boolean matchFound = matcher.find(); if (matchFound) { LOGGER.logError(kostsimy.getTextResourceService().getText(ERROR_IOE, kostsimy.getTextResourceService().getText(ERROR_SPECIAL_CHARACTER, name))); System.out.println(kostsimy.getTextResourceService().getText(ERROR_SPECIAL_CHARACTER, name)); System.exit(1); } } name = repDir.getAbsolutePath(); pathElements = name.split("/"); for (int i = 0; i < pathElements.length; i++) { String element = pathElements[i]; Matcher matcher = pattern.matcher(element); boolean matchFound = matcher.find(); if (matchFound) { LOGGER.logError(kostsimy.getTextResourceService().getText(ERROR_IOE, kostsimy.getTextResourceService().getText(ERROR_SPECIAL_CHARACTER, name))); System.out.println(kostsimy.getTextResourceService().getText(ERROR_SPECIAL_CHARACTER, name)); System.exit(1); } } LOGGER.logError(kostsimy.getTextResourceService().getText(MESSAGE_XML_IMAGE1)); float count = 0; int countNio = 0; int countIo = 0; float countVal = 0; int countNotVal = 0; float percentage = (float) 0.0; if (!origDir.isDirectory()) { // TODO: Bildervergleich zweier Dateien --> erledigt --> nur Marker if (repDir.isDirectory()) { // Das Replica-ist ein Verzeichnis, aber Original eine Datei LOGGER.logError(kostsimy.getTextResourceService().getText(ERROR_IOE, kostsimy.getTextResourceService().getText(ERROR_NOREPDIR2, repDir.getAbsolutePath()))); System.out.println( kostsimy.getTextResourceService().getText(ERROR_NOREPDIR2, repDir.getAbsolutePath())); System.exit(1); } boolean compFile = compFile(origDir, logFileName, directoryOfLogfile, repDir, tmpDir); float statIo = 0; int statNio = 0; float statUn = 0; if (compFile) { statIo = 100; } else { statNio = 100; } LOGGER.logError(kostsimy.getTextResourceService().getText(MESSAGE_XML_IMAGE2)); LOGGER.logError( kostsimy.getTextResourceService().getText(MESSAGE_XML_STATISTICS, statIo, statNio, statUn)); LOGGER.logError(kostsimy.getTextResourceService().getText(MESSAGE_XML_LOGEND)); // Zeitstempel End java.util.Date nowEnd = new java.util.Date(); java.text.SimpleDateFormat sdfEnd = new java.text.SimpleDateFormat("dd.MM.yyyy HH:mm:ss"); String ausgabeEnd = sdfEnd.format(nowEnd); ausgabeEnd = "<End>" + ausgabeEnd + "</End>"; Util.valEnd(ausgabeEnd, logFile); Util.amp(logFile); // Die Konfiguration hereinkopieren try { DocumentBuilderFactory factory = DocumentBuilderFactory.newInstance(); factory.setValidating(false); factory.setExpandEntityReferences(false); Document docConfig = factory.newDocumentBuilder().parse(configFile); NodeList list = docConfig.getElementsByTagName("configuration"); Element element = (Element) list.item(0); Document docLog = factory.newDocumentBuilder().parse(logFile); Node dup = docLog.importNode(element, true); docLog.getDocumentElement().appendChild(dup); FileWriter writer = new FileWriter(logFile); ByteArrayOutputStream baos = new ByteArrayOutputStream(); ElementToStream(docLog.getDocumentElement(), baos); String stringDoc2 = new String(baos.toByteArray()); writer.write(stringDoc2); writer.close(); // Der Header wird dabei leider verschossen, wieder zurck ndern String newstring = kostsimy.getTextResourceService().getText(MESSAGE_XML_HEADER); String oldstring = "<?xml version=\"1.0\" encoding=\"UTF-8\"?><KOSTSimyLog>"; Util.oldnewstring(oldstring, newstring, logFile); } catch (Exception e) { LOGGER.logError( "<Error>" + kostsimy.getTextResourceService().getText(ERROR_XML_UNKNOWN, e.getMessage())); System.out.println("Exception: " + e.getMessage()); } if (compFile) { // Lschen des Arbeitsverzeichnisses, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } // Validierte Datei valide System.exit(0); } else { // Lschen des Arbeitsverzeichnisses, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } // Fehler in Validierte Datei --> invalide System.exit(2); } } else { // TODO: Bildervergleich zweier Verzeichnisse --> in Arbeit --> nur Marker if (!repDir.isDirectory()) { // Das Replica-ist eine Datei, aber Original ein Ordner LOGGER.logError(kostsimy.getTextResourceService().getText(ERROR_IOE, kostsimy.getTextResourceService().getText(ERROR_NOREPDIR3, repDir.getAbsolutePath()))); System.out.println( kostsimy.getTextResourceService().getText(ERROR_NOREPDIR3, repDir.getAbsolutePath())); System.exit(1); } Map<String, File> fileMap = Util.getFileMap(origDir, false); Set<String> fileMapKeys = fileMap.keySet(); boolean other = false; for (Iterator<String> iterator = fileMapKeys.iterator(); iterator.hasNext();) { String entryName = iterator.next(); File newFile = fileMap.get(entryName); if (!newFile.isDirectory()) { origDir = newFile; count = count + 1; if ((origDir.getAbsolutePath().toLowerCase().endsWith(".pdf") || origDir.getAbsolutePath().toLowerCase().endsWith(".pdfa") || origDir.getAbsolutePath().toLowerCase().endsWith(".tif") || origDir.getAbsolutePath().toLowerCase().endsWith(".tiff") || origDir.getAbsolutePath().toLowerCase().endsWith(".jpeg") || origDir.getAbsolutePath().toLowerCase().endsWith(".jpg") || origDir.getAbsolutePath().toLowerCase().endsWith(".jpe") || origDir.getAbsolutePath().toLowerCase().endsWith(".jp2") || origDir.getAbsolutePath().toLowerCase().endsWith(".gif") || origDir.getAbsolutePath().toLowerCase().endsWith(".png") || origDir.getAbsolutePath().toLowerCase().endsWith(".bmp"))) { percentage = 100 / count * countVal; if (percentage < iRandomTest) { // if ( 100 / count * (countVal + 1) <= iRandomTest ) { countVal = countVal + 1; String origWithOutExt = FilenameUtils.removeExtension(origDir.getName()); File repFile = new File( repDir.getAbsolutePath() + File.separator + origWithOutExt + ".pdf"); if (!repFile.exists()) { repFile = new File( repDir.getAbsolutePath() + File.separator + origWithOutExt + ".pdfa"); if (!repFile.exists()) { repFile = new File( repDir.getAbsolutePath() + File.separator + origWithOutExt + ".tif"); if (!repFile.exists()) { repFile = new File(repDir.getAbsolutePath() + File.separator + origWithOutExt + ".tiff"); if (!repFile.exists()) { repFile = new File(repDir.getAbsolutePath() + File.separator + origWithOutExt + ".jpeg"); if (!repFile.exists()) { repFile = new File(repDir.getAbsolutePath() + File.separator + origWithOutExt + ".jpg"); if (!repFile.exists()) { repFile = new File(repDir.getAbsolutePath() + File.separator + origWithOutExt + ".jpe"); if (!repFile.exists()) { repFile = new File(repDir.getAbsolutePath() + File.separator + origWithOutExt + ".jp2"); if (!repFile.exists()) { repFile = new File(repDir.getAbsolutePath() + File.separator + origWithOutExt + ".gif"); if (!repFile.exists()) { repFile = new File(repDir.getAbsolutePath() + File.separator + origWithOutExt + ".png"); if (!repFile.exists()) { repFile = new File(repDir.getAbsolutePath() + File.separator + origWithOutExt + ".bmp"); if (!repFile.exists()) { other = true; LOGGER.logError(kostsimy .getTextResourceService() .getText(MESSAGE_XML_VALERGEBNIS)); LOGGER.logError(kostsimy .getTextResourceService() .getText(MESSAGE_XML_COMPFILE, origDir)); LOGGER.logError(kostsimy .getTextResourceService().getText( MESSAGE_XML_VALERGEBNIS_NOTVALIDATED)); LOGGER.logError( kostsimy.getTextResourceService() .getText(ERROR_NOREP, origDir.getName())); LOGGER.logError(kostsimy .getTextResourceService().getText( MESSAGE_XML_VALERGEBNIS_CLOSE)); } } } } } } } } } } } if (!other) { boolean compFile = compFile(origDir, logFileName, directoryOfLogfile, repFile, tmpDir); if (compFile) { // Vergleich bestanden countIo = countIo + 1; } else { // Vergleich nicht bestanden countNio = countNio + 1; } } } else { countNotVal = countNotVal + 1; LOGGER.logError(kostsimy.getTextResourceService().getText(MESSAGE_XML_VALERGEBNIS)); LOGGER.logError( kostsimy.getTextResourceService().getText(MESSAGE_XML_COMPFILE, origDir)); LOGGER.logError(kostsimy.getTextResourceService() .getText(MESSAGE_XML_VALERGEBNIS_NOTVALIDATED)); LOGGER.logError( kostsimy.getTextResourceService().getText(MESSAGE_XML_VALERGEBNIS_CLOSE)); } } else { countNotVal = countNotVal + 1; LOGGER.logError(kostsimy.getTextResourceService().getText(MESSAGE_XML_VALERGEBNIS)); LOGGER.logError(kostsimy.getTextResourceService().getText(MESSAGE_XML_COMPFILE, origDir)); LOGGER.logError( kostsimy.getTextResourceService().getText(MESSAGE_XML_VALERGEBNIS_NOTVALIDATED)); LOGGER.logError( kostsimy.getTextResourceService().getText(ERROR_INCORRECTFILEENDING, origDir)); LOGGER.logError(kostsimy.getTextResourceService().getText(MESSAGE_XML_VALERGEBNIS_CLOSE)); } } } if (countNio == 0 && countIo == 0) { // keine Dateien verglichen LOGGER.logError(kostsimy.getTextResourceService().getText(ERROR_INCORRECTFILEENDINGS)); System.out.println(kostsimy.getTextResourceService().getText(ERROR_INCORRECTFILEENDINGS)); } float statIo = 100 / (float) count * (float) countIo; float statNio = 100 / (float) count * (float) countNio; float statUn = 100 - statIo - statNio; LOGGER.logError(kostsimy.getTextResourceService().getText(MESSAGE_XML_IMAGE2)); LOGGER.logError( kostsimy.getTextResourceService().getText(MESSAGE_XML_STATISTICS, statIo, statNio, statUn)); LOGGER.logError(kostsimy.getTextResourceService().getText(MESSAGE_XML_LOGEND)); // Zeitstempel End java.util.Date nowEnd = new java.util.Date(); java.text.SimpleDateFormat sdfEnd = new java.text.SimpleDateFormat("dd.MM.yyyy HH:mm:ss"); String ausgabeEnd = sdfEnd.format(nowEnd); ausgabeEnd = "<End>" + ausgabeEnd + "</End>"; Util.valEnd(ausgabeEnd, logFile); Util.amp(logFile); // Die Konfiguration hereinkopieren try { DocumentBuilderFactory factory = DocumentBuilderFactory.newInstance(); factory.setValidating(false); factory.setExpandEntityReferences(false); Document docConfig = factory.newDocumentBuilder().parse(configFile); NodeList list = docConfig.getElementsByTagName("configuration"); Element element = (Element) list.item(0); Document docLog = factory.newDocumentBuilder().parse(logFile); Node dup = docLog.importNode(element, true); docLog.getDocumentElement().appendChild(dup); FileWriter writer = new FileWriter(logFile); ByteArrayOutputStream baos = new ByteArrayOutputStream(); ElementToStream(docLog.getDocumentElement(), baos); String stringDoc2 = new String(baos.toByteArray()); writer.write(stringDoc2); writer.close(); // Der Header wird dabei leider verschossen, wieder zurck ndern String newstring = kostsimy.getTextResourceService().getText(MESSAGE_XML_HEADER); String oldstring = "<?xml version=\"1.0\" encoding=\"UTF-8\"?><KOSTSimyLog>"; Util.oldnewstring(oldstring, newstring, logFile); } catch (Exception e) { LOGGER.logError( "<Error>" + kostsimy.getTextResourceService().getText(ERROR_XML_UNKNOWN, e.getMessage())); System.out.println("Exception: " + e.getMessage()); } if (countNio == 0 && countIo == 0) { // keine Dateien verglichen bestehendes Workverzeichnis ggf. lschen if (tmpDir.exists()) { Util.deleteDir(tmpDir); } System.exit(1); } else if (countNio == 0) { // bestehendes Workverzeichnis ggf. lschen if (tmpDir.exists()) { Util.deleteDir(tmpDir); } // alle Validierten Dateien valide System.exit(0); } else { // bestehendes Workverzeichnis ggf. lschen if (tmpDir.exists()) { Util.deleteDir(tmpDir); } // Fehler in Validierten Dateien --> invalide System.exit(2); } if (tmpDir.exists()) { Util.deleteDir(tmpDir); tmpDir.deleteOnExit(); } } }
From source file:ch.kostceco.tools.siardexcerpt.SIARDexcerpt.java
/** Die Eingabe besteht aus mind 3 Parameter: [0] Pfad zur SIARD-Datei oder Verzeichnis [1] * configfile [2] Modul//from w w w . j av a 2 s. co m * * bersicht der Module: --init --search --extract sowie --finish * * bei --search kommen danach noch die Suchtexte und bei --extract die Schlssel * * @param args * @throws IOException */ public static void main(String[] args) throws IOException { ApplicationContext context = new ClassPathXmlApplicationContext("classpath:config/applicationContext.xml"); /** SIARDexcerpt: Aufbau des Tools * * 1) init: Config Kopieren und ggf SIARD-Datei ins Workverzeichnis entpacken * * 2) search: gemss config die Tabelle mit Suchtext befragen und Ausgabe des Resultates * * 3) extract: mit den Keys anhand der config einen Records herausziehen und anzeigen * * 4) finish: Config-Kopie sowie Workverzeichnis lschen */ /* TODO: siehe Bemerkung im applicationContext-services.xml bezglich Injection in der * Superklasse aller Impl-Klassen ValidationModuleImpl validationModuleImpl = * (ValidationModuleImpl) context.getBean("validationmoduleimpl"); */ SIARDexcerpt siardexcerpt = (SIARDexcerpt) context.getBean("siardexcerpt"); // Ist die Anzahl Parameter (mind 3) korrekt? if (args.length < 3) { System.out.println(siardexcerpt.getTextResourceService().getText(ERROR_PARAMETER_USAGE)); System.exit(1); } String module = new String(args[2]); File siardDatei = new File(args[0]); File configFile = new File(args[1]); /* arg 1 gibt den Pfad zur configdatei an. Da dieser in ConfigurationServiceImpl hartcodiert * ist, wird diese nach "configuration/SIARDexcerpt.conf.xml" kopiert. */ File configFileHard = new File("configuration" + File.separator + "SIARDexcerpt.conf.xml"); // excerpt ist der Standardwert wird aber anhand der config dann gesetzt File directoryOfOutput = new File("excerpt"); // temp_SIARDexcerpt ist der Standardwert wird aber anhand der config dann gesetzt File tmpDir = new File("temp_SIARDexcerpt"); boolean okA = false; boolean okB = false; boolean okC = false; // die Anwendung muss mindestens unter Java 6 laufen String javaRuntimeVersion = System.getProperty("java.vm.version"); if (javaRuntimeVersion.compareTo("1.6.0") < 0) { System.out.println(siardexcerpt.getTextResourceService().getText(ERROR_WRONG_JRE)); System.exit(1); } if (module.equalsIgnoreCase("--init")) { /** 1) init: Config Kopieren und ggf SIARD-Datei ins Workverzeichnis entpacken * * a) config muss existieren und SIARDexcerpt.conf.xml noch nicht * * b) Excerptverzeichnis mit schreibrechte und ggf anlegen * * c) Workverzeichnis muss leer sein und mit schreibrechte * * d) SIARD-Datei entpacken * * e) Struktur-Check SIARD-Verzeichnis * * TODO: Erledigt */ System.out.println("SIARDexcerpt: init"); /** a) config muss existieren und SIARDexcerpt.conf.xml noch nicht */ if (!configFile.exists()) { System.out.println(siardexcerpt.getTextResourceService().getText(ERROR_CONFIGFILE_FILENOTEXISTING, configFile.getAbsolutePath())); System.exit(1); } if (configFileHard.exists()) { System.out .println(siardexcerpt.getTextResourceService().getText(ERROR_CONFIGFILEHARD_FILEEXISTING)); System.exit(1); } Util.copyFile(configFile, configFileHard); /** b) Excerptverzeichnis mit schreibrechte und ggf anlegen */ String pathToOutput = siardexcerpt.getConfigurationService().getPathToOutput(); directoryOfOutput = new File(pathToOutput); if (!directoryOfOutput.exists()) { directoryOfOutput.mkdir(); } // Im Logverzeichnis besteht kein Schreibrecht if (!directoryOfOutput.canWrite()) { System.out.println(siardexcerpt.getTextResourceService().getText(ERROR_LOGDIRECTORY_NOTWRITABLE, directoryOfOutput)); // Lschen des configFileHard, falls eines angelegt wurde if (configFileHard.exists()) { Util.deleteDir(configFileHard); } System.exit(1); } if (!directoryOfOutput.isDirectory()) { System.out.println(siardexcerpt.getTextResourceService().getText(ERROR_LOGDIRECTORY_NODIRECTORY)); // Lschen des configFileHard, falls eines angelegt wurde if (configFileHard.exists()) { Util.deleteDir(configFileHard); } System.exit(1); } /** c) Workverzeichnis muss leer sein und mit schreibrechte */ String pathToWorkDir = siardexcerpt.getConfigurationService().getPathToWorkDir(); tmpDir = new File(pathToWorkDir); /* bestehendes Workverzeichnis Abbruch wenn nicht leer, da am Schluss das Workverzeichnis * gelscht wird und entsprechend bestehende Dateien gelscht werden knnen */ if (tmpDir.exists()) { if (tmpDir.isDirectory()) { // Get list of file in the directory. When its length is not zero the folder is not empty. String[] files = tmpDir.list(); if (files.length > 0) { System.out.println(siardexcerpt.getTextResourceService().getText(ERROR_WORKDIRECTORY_EXISTS, pathToWorkDir)); // Lschen des configFileHard, falls eines angelegt wurde if (configFileHard.exists()) { Util.deleteDir(configFileHard); } System.exit(1); } } } if (!tmpDir.exists()) { tmpDir.mkdir(); } // Im Workverzeichnis besteht kein Schreibrecht if (!tmpDir.canWrite()) { System.out.println(siardexcerpt.getTextResourceService().getText(ERROR_WORKDIRECTORY_NOTWRITABLE, pathToWorkDir)); // Lschen des configFileHard, falls eines angelegt wurde if (configFileHard.exists()) { Util.deleteDir(configFileHard); } System.exit(1); } /** d) SIARD-Datei entpacken */ if (!siardDatei.exists()) { // SIARD-Datei existiert nicht System.out.println(siardexcerpt.getTextResourceService().getText(ERROR_SIARDFILE_FILENOTEXISTING, siardDatei.getAbsolutePath())); // Lschen des configFileHard, falls eines angelegt wurde if (configFileHard.exists()) { Util.deleteDir(configFileHard); } System.exit(1); } if (!siardDatei.isDirectory()) { /* SIARD-Datei ist eine Datei * * Die Datei muss ins Workverzeichnis extrahiert werden. Dies erfolgt im Modul A. * * danach der Pfad zu SIARD-Datei dorthin zeigen lassen */ Controllerexcerpt controllerexcerpt = (Controllerexcerpt) context.getBean("controllerexcerpt"); File siardDateiNew = new File(pathToWorkDir + File.separator + siardDatei.getName()); okA = controllerexcerpt.executeA(siardDatei, siardDateiNew, ""); if (!okA) { // SIARD Datei konte nicht entpackt werden System.out.println(MESSAGE_XML_MODUL_A); System.out.println(ERROR_XML_A_CANNOTEXTRACTZIP); // Lschen des Arbeitsverzeichnisses und configFileHard, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } if (configFileHard.exists()) { Util.deleteDir(configFileHard); } // Fehler Extraktion --> invalide System.exit(2); } else { @SuppressWarnings("unused") File siardDateiOld = siardDatei; siardDatei = siardDateiNew; } } else { /* SIARD-Datei entpackt oder Datei war bereits ein Verzeichnis. * * Gerade bei grsseren SIARD-Dateien ist es sinnvoll an einer Stelle das ausgepackte SIARD * zu haben, damit diese nicht immer noch extrahiert werden muss */ } /** e) Struktur-Check SIARD-Verzeichnis */ File content = new File(siardDatei.getAbsolutePath() + File.separator + "content"); File header = new File(siardDatei.getAbsolutePath() + File.separator + "header"); File xsd = new File( siardDatei.getAbsolutePath() + File.separator + "header" + File.separator + "metadata.xsd"); File metadata = new File( siardDatei.getAbsolutePath() + File.separator + "header" + File.separator + "metadata.xml"); if (!content.exists() || !header.exists() || !xsd.exists() || !metadata.exists()) { System.out.println(siardexcerpt.getTextResourceService().getText(ERROR_XML_B_STRUCTURE)); // Lschen des Arbeitsverzeichnisses und configFileHard, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } if (configFileHard.exists()) { Util.deleteDir(configFileHard); } // Fehler Extraktion --> invalide System.exit(2); } else { // Struktur sieht plausibel aus, extraktion kann starten } } // End init if (module.equalsIgnoreCase("--search")) { /** 2) search: gemss config die Tabelle mit Suchtext befragen und Ausgabe des Resultates * * a) Ist die Anzahl Parameter (mind 4) korrekt? arg4 = Suchtext * * b) Suchtext einlesen * * c) search.xml vorbereiten (Header) und xsl in Output kopieren * * d) grep ausfhren * * e) Suchergebnis speichern und anzeigen (via GUI) * * TODO: Noch offen */ System.out.println("SIARDexcerpt: search"); String pathToOutput = siardexcerpt.getConfigurationService().getPathToOutput(); directoryOfOutput = new File(pathToOutput); if (!directoryOfOutput.exists()) { directoryOfOutput.mkdir(); } /** a) Ist die Anzahl Parameter (mind 4) korrekt? arg4 = Suchtext */ if (args.length < 4) { System.out.println(siardexcerpt.getTextResourceService().getText(ERROR_PARAMETER_USAGE)); System.exit(1); } if (!siardDatei.isDirectory()) { File siardDateiNew = new File(tmpDir.getAbsolutePath() + File.separator + siardDatei.getName()); if (!siardDateiNew.exists()) { System.out.println(siardexcerpt.getTextResourceService().getText(ERROR_NOINIT)); System.exit(1); } else { siardDatei = siardDateiNew; } } /** b) Suchtext einlesen */ String searchString = new String(args[3]); /** c) search.xml vorbereiten (Header) und xsl in Output kopieren */ // Zeitstempel der Datenextraktion java.util.Date nowStartS = new java.util.Date(); java.text.SimpleDateFormat sdfStartS = new java.text.SimpleDateFormat("dd.MM.yyyy HH:mm:ss"); String ausgabeStartS = sdfStartS.format(nowStartS); /* Der SearchString kann zeichen enthalten, welche nicht im Dateinamen vorkommen drfen. * Entsprechend werden diese normalisiert */ String searchStringFilename = searchString.replaceAll("/", "_"); searchStringFilename = searchStringFilename.replaceAll(">", "_"); searchStringFilename = searchStringFilename.replaceAll("<", "_"); searchStringFilename = searchStringFilename.replace(".*", "_"); searchStringFilename = searchStringFilename.replaceAll("___", "_"); searchStringFilename = searchStringFilename.replaceAll("__", "_"); String outDateiNameS = siardDatei.getName() + "_" + searchStringFilename + "_SIARDsearch.xml"; outDateiNameS = outDateiNameS.replaceAll("__", "_"); // Informationen zum Archiv holen String archiveS = siardexcerpt.getConfigurationService().getArchive(); // Konfiguration des Outputs, ein File Logger wird zustzlich erstellt LogConfigurator logConfiguratorS = (LogConfigurator) context.getBean("logconfigurator"); String outFileNameS = logConfiguratorS.configure(directoryOfOutput.getAbsolutePath(), outDateiNameS); File outFileSearch = new File(outFileNameS); // Ab hier kann ins Output geschrieben werden... // Informationen zum XSL holen String pathToXSLS = siardexcerpt.getConfigurationService().getPathToXSLsearch(); File xslOrigS = new File(pathToXSLS); File xslCopyS = new File(directoryOfOutput.getAbsolutePath() + File.separator + xslOrigS.getName()); if (!xslCopyS.exists()) { Util.copyFile(xslOrigS, xslCopyS); } LOGGER.logError(siardexcerpt.getTextResourceService().getText(MESSAGE_XML_HEADER, xslCopyS.getName())); LOGGER.logError(siardexcerpt.getTextResourceService().getText(MESSAGE_XML_START, ausgabeStartS)); LOGGER.logError(siardexcerpt.getTextResourceService().getText(MESSAGE_XML_ARCHIVE, archiveS)); LOGGER.logError(siardexcerpt.getTextResourceService().getText(MESSAGE_XML_INFO)); /** d) search: dies ist in einem eigenen Modul realisiert */ Controllerexcerpt controllerexcerptS = (Controllerexcerpt) context.getBean("controllerexcerpt"); okB = controllerexcerptS.executeB(siardDatei, outFileSearch, searchString); /** e) Ausgabe und exitcode */ if (!okB) { // Suche konnte nicht erfolgen LOGGER.logError(siardexcerpt.getTextResourceService().getText(MESSAGE_XML_MODUL_B)); LOGGER.logError(siardexcerpt.getTextResourceService().getText(ERROR_XML_B_CANNOTSEARCHRECORD)); LOGGER.logError(siardexcerpt.getTextResourceService().getText(MESSAGE_XML_LOGEND)); System.out.println(MESSAGE_XML_MODUL_B); System.out.println(ERROR_XML_B_CANNOTSEARCHRECORD); System.out.println(""); // Lschen des Arbeitsverzeichnisses und configFileHard erfolgt erst bei schritt 4 finish // Fehler Extraktion --> invalide System.exit(2); } else { // Suche konnte durchgefhrt werden LOGGER.logError(siardexcerpt.getTextResourceService().getText(MESSAGE_XML_LOGEND)); // Lschen des Arbeitsverzeichnisses und configFileHard erfolgt erst bei schritt 4 finish // Record konnte extrahiert werden System.exit(0); } } // End search if (module.equalsIgnoreCase("--excerpt")) { /** 3) extract: mit den Keys anhand der config einen Records herausziehen und anzeigen * * a) Ist die Anzahl Parameter (mind 4) korrekt? arg4 = Suchtext * * b) extract.xml vorbereiten (Header) und xsl in Output kopieren * * c) extraktion: dies ist in einem eigenen Modul realisiert * * d) Ausgabe und exitcode * * TODO: Erledigt */ System.out.println("SIARDexcerpt: extract"); String pathToOutput = siardexcerpt.getConfigurationService().getPathToOutput(); directoryOfOutput = new File(pathToOutput); if (!directoryOfOutput.exists()) { directoryOfOutput.mkdir(); } /** a) Ist die Anzahl Parameter (mind 4) korrekt? arg4 = Suchtext */ if (args.length < 4) { System.out.println(siardexcerpt.getTextResourceService().getText(ERROR_PARAMETER_USAGE)); System.exit(1); } if (!siardDatei.isDirectory()) { File siardDateiNew = new File(tmpDir.getAbsolutePath() + File.separator + siardDatei.getName()); if (!siardDateiNew.exists()) { System.out.println(siardexcerpt.getTextResourceService().getText(ERROR_NOINIT)); System.exit(1); } else { siardDatei = siardDateiNew; } } /** b) extract.xml vorbereiten (Header) und xsl in Output kopieren */ // Zeitstempel der Datenextraktion java.util.Date nowStart = new java.util.Date(); java.text.SimpleDateFormat sdfStart = new java.text.SimpleDateFormat("dd.MM.yyyy HH:mm:ss"); String ausgabeStart = sdfStart.format(nowStart); String excerptString = new String(args[3]); String outDateiName = siardDatei.getName() + "_" + excerptString + "_SIARDexcerpt.xml"; // Informationen zum Archiv holen String archive = siardexcerpt.getConfigurationService().getArchive(); // Konfiguration des Outputs, ein File Logger wird zustzlich erstellt LogConfigurator logConfigurator = (LogConfigurator) context.getBean("logconfigurator"); String outFileName = logConfigurator.configure(directoryOfOutput.getAbsolutePath(), outDateiName); File outFile = new File(outFileName); // Ab hier kann ins Output geschrieben werden... // Informationen zum XSL holen String pathToXSL = siardexcerpt.getConfigurationService().getPathToXSL(); File xslOrig = new File(pathToXSL); File xslCopy = new File(directoryOfOutput.getAbsolutePath() + File.separator + xslOrig.getName()); if (!xslCopy.exists()) { Util.copyFile(xslOrig, xslCopy); } LOGGER.logError(siardexcerpt.getTextResourceService().getText(MESSAGE_XML_HEADER, xslCopy.getName())); LOGGER.logError(siardexcerpt.getTextResourceService().getText(MESSAGE_XML_START, ausgabeStart)); LOGGER.logError(siardexcerpt.getTextResourceService().getText(MESSAGE_XML_ARCHIVE, archive)); LOGGER.logError(siardexcerpt.getTextResourceService().getText(MESSAGE_XML_INFO)); /** c) extraktion: dies ist in einem eigenen Modul realisiert */ Controllerexcerpt controllerexcerpt = (Controllerexcerpt) context.getBean("controllerexcerpt"); okC = controllerexcerpt.executeC(siardDatei, outFile, excerptString); /** d) Ausgabe und exitcode */ if (!okC) { // Record konnte nicht extrahiert werden LOGGER.logError(siardexcerpt.getTextResourceService().getText(MESSAGE_XML_MODUL_C)); LOGGER.logError(siardexcerpt.getTextResourceService().getText(ERROR_XML_C_CANNOTEXTRACTRECORD)); LOGGER.logError(siardexcerpt.getTextResourceService().getText(MESSAGE_XML_LOGEND)); System.out.println(MESSAGE_XML_MODUL_C); System.out.println(ERROR_XML_C_CANNOTEXTRACTRECORD); System.out.println(""); // Lschen des Arbeitsverzeichnisses und configFileHard erfolgt erst bei schritt 4 finish // Fehler Extraktion --> invalide System.exit(2); } else { // Record konnte extrahiert werden LOGGER.logError(siardexcerpt.getTextResourceService().getText(MESSAGE_XML_LOGEND)); // Lschen des Arbeitsverzeichnisses und configFileHard erfolgt erst bei schritt 4 finish // Record konnte extrahiert werden System.exit(0); } } // End extract if (module.equalsIgnoreCase("--finish")) { /** 4) finish: Config-Kopie sowie Workverzeichnis lschen * * TODO: Erledigt */ System.out.println("SIARDexcerpt: finish"); // Lschen des Arbeitsverzeichnisses und confiFileHard, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } if (configFileHard.exists()) { Util.deleteDir(configFileHard); } } // End finish }
From source file:de.prozesskraft.pkraft.Createdoc.java
public static void main(String[] args) throws org.apache.commons.cli.ParseException, IOException { Createdoc tmp = new Createdoc(); /*---------------------------- get options from ini-file/*from w ww . j a va 2 s . c om*/ ----------------------------*/ File installDir = new java.io.File(WhereAmI.getInstallDirectoryAbsolutePath(Createdoc.class) + "/.."); File inifile = new java.io.File(installDir.getAbsolutePath() + "/etc/pkraft-createdoc.ini"); if (inifile.exists()) { try { ini = new Ini(inifile); } catch (InvalidFileFormatException e1) { // TODO Auto-generated catch block e1.printStackTrace(); } catch (IOException e1) { // TODO Auto-generated catch block e1.printStackTrace(); } } else { System.err.println("ini file does not exist: " + inifile.getAbsolutePath()); System.exit(1); } /*---------------------------- create boolean options ----------------------------*/ Option ohelp = new Option("help", "print this message"); Option ov = new Option("v", "prints version and build-date"); /*---------------------------- create argument options ----------------------------*/ Option odefinition = OptionBuilder.withArgName("definition").hasArg() .withDescription("[mandatory] process definition file") // .isRequired() .create("definition"); Option oformat = OptionBuilder.withArgName("format").hasArg() .withDescription("[mandatory, default=pdf] output format (pdf|pptx) ").create("format"); Option ooutput = OptionBuilder.withArgName("output").hasArg().withDescription( "[mandatory, default=out.<format>] output file with full documentation of process definition") // .isRequired() .create("output"); //// Option property = OptionBuilder.withArgName( "property=value" ) //// .hasArgs(2) //// .withValueSeparator() //// .withDescription( "use value for given property" ) //// .create("D"); // // /*---------------------------- // create options object // ----------------------------*/ Options options = new Options(); options.addOption(ohelp); options.addOption(ov); options.addOption(odefinition); options.addOption(oformat); options.addOption(ooutput); /*---------------------------- create the parser ----------------------------*/ CommandLineParser parser = new GnuParser(); // parse the command line arguments line = parser.parse(options, args); /*---------------------------- usage/help ----------------------------*/ if (line.hasOption("help")) { HelpFormatter formatter = new HelpFormatter(); formatter.printHelp("createdoc", options); System.exit(0); } if (line.hasOption("v")) { System.out.println("web: www.prozesskraft.de"); System.out.println("version: [% version %]"); System.out.println("date: [% date %]"); System.exit(0); } /*---------------------------- die variablen festlegen ----------------------------*/ int error = 0; String definition = null; String format = null; String output = null; // festlegen von definition if (line.hasOption("definition")) { definition = line.getOptionValue("definition"); if (!(new java.io.File(definition).exists())) { System.err.println("file does not exist " + definition); } } else { System.err.println("parameter -definition is mandatory"); error++; } // festlegen von format if (line.hasOption("format")) { if (line.getOptionValue("format").matches("pdf|pptx")) { format = line.getOptionValue("format"); } else { System.err.println("for -format use only pdf|pptx"); error++; } } else { format = "pdf"; } // festlegen von output if (line.hasOption("output")) { output = line.getOptionValue("output"); } else { output = "out." + format; } // feststellen ob output bereits existiert if (new java.io.File(output).exists()) { System.err.println("output already exists: " + output); error++; } // aussteigen, falls fehler aufgetaucht sind if (error > 0) { System.err.println("error(s) occured. try -help for help."); System.exit(1); } /*---------------------------- die lizenz ueberpruefen und ggf abbrechen ----------------------------*/ // check for valid license ArrayList<String> allPortAtHost = new ArrayList<String>(); allPortAtHost.add(ini.get("license-server", "license-server-1")); allPortAtHost.add(ini.get("license-server", "license-server-2")); allPortAtHost.add(ini.get("license-server", "license-server-3")); MyLicense lic = new MyLicense(allPortAtHost, "1", "user-edition", "0.1"); // lizenz-logging ausgeben for (String actLine : (ArrayList<String>) lic.getLog()) { System.err.println(actLine); } // abbruch, wenn lizenz nicht valide if (!lic.isValid()) { System.exit(1); } /*---------------------------- die eigentliche business logic ----------------------------*/ Process process = new Process(); Reporter report; process.setInfilexml(definition); System.out.println("info: reading process definition " + definition); try { process.readXml(); process.setStepRanks(); } catch (JAXBException e) { // TODO Auto-generated catch block e.printStackTrace(); } //festlegen des temporaeren verzeichnisses fuer die Daten und Pfade erzeugen long jetztMillis = System.currentTimeMillis(); String randomPathJasperFilled = "/tmp/" + jetztMillis + "_jasperFilled"; String randomPathPng = "/tmp/" + jetztMillis + "_png"; String randomPathPdf = "/tmp/" + jetztMillis + "_pdf"; String randomPathPptx = "/tmp/" + jetztMillis + "_pptx"; new File(randomPathJasperFilled).mkdirs(); new File(randomPathPng).mkdirs(); new File(randomPathPdf).mkdirs(); new File(randomPathPptx).mkdirs(); ////////////////////////////////////////// // erstellen der Bilder // konfigurieren der processing ansicht // PmodelViewPage page = new PmodelViewPage(process); PmodelViewPage page = new PmodelViewPage(); page.einstellungen.getProcess().setStepRanks(); page.einstellungen.setSize(100); page.einstellungen.setZoom(100); // page.einstellungen.setZoom(8 * 100/process.getMaxLevel()); page.einstellungen.setTextsize(0); page.einstellungen.setRanksize(7); page.einstellungen.setWidth(2500); page.einstellungen.setHeight(750); page.einstellungen.setGravx(10); page.einstellungen.setGravy(0); page.einstellungen.setRootpositionratiox((float) 0.05); page.einstellungen.setRootpositionratioy((float) 0.5); page.einstellungen.setProcess(process); createContents(page); // mit open kann die page angezeigt werden if (!(produktiv)) { open(); } // // warten // System.out.println("stabilisierung ansicht: 5 sekunden warten gravitation = "+page.einstellungen.getGravx()); // long jetzt5 = System.currentTimeMillis(); // while (System.currentTimeMillis() < jetzt5 + 5000) // { // // } // // page.einstellungen.setGravx(10); // // warten int wartezeitSeconds = 1; if (produktiv) { wartezeitSeconds = page.einstellungen.getProcess().getStep().size() * 2; } System.out.println("stabilisierung ansicht: " + wartezeitSeconds + " sekunden warten gravitation = " + page.einstellungen.getGravx()); long jetzt6 = System.currentTimeMillis(); while (System.currentTimeMillis() < jetzt6 + (wartezeitSeconds * 1000)) { } page.einstellungen.setFix(true); // VORBEREITUNG) bild speichern processTopologyImagePath = randomPathPng + "/processTopology.png"; page.savePic(processTopologyImagePath); // zuerst 1 sekunde warten, dann autocrop long jetzt = System.currentTimeMillis(); while (System.currentTimeMillis() < jetzt + 1000) { } new AutoCropBorder(processTopologyImagePath); // VORBEREITUNG) fuer jeden step ein bild speichern for (Step actualStep : process.getStep()) { // root ueberspringen // if (actualStep.isRoot()); String stepImagePath = randomPathPng + "/step_" + actualStep.getName() + "_Topology.png"; // Farbe des Steps auf finished (gruen) aendern page.einstellungen.getProcess().getRootStep().setStatusOverwrite("waiting"); actualStep.setStatusOverwrite("finished"); // etwas warten, bis die farbe bezeichnet wurde long jetzt4 = System.currentTimeMillis(); while (System.currentTimeMillis() < jetzt4 + 500) { } page.savePic(stepImagePath); // zuerst 1 sekunde warten, dann autocrop long jetzt3 = System.currentTimeMillis(); while (System.currentTimeMillis() < jetzt3 + 1000) { } new AutoCropBorder(stepImagePath); stepTopologyImagePath.put(actualStep.getName(), stepImagePath); // farbe wieder auf grau aendern actualStep.setStatusOverwrite(null); System.out.println("erstelle bild fuer step: " + actualStep.getName()); long jetzt2 = System.currentTimeMillis(); while (System.currentTimeMillis() < jetzt2 + 1000) { } } page.destroy(); ////////////////////////////////////////// report = new Reporter(); // P03) erstellen des p03 System.out.println("info: generating p03."); String pdfPathP03 = null; String pptxPathP03 = null; String jasperPathP03 = null; String jasperFilledPathP03 = null; // P03) feststellen, welches jasperreports-template fuer den angeforderten typ verwendet werden soll if (ini.get("pkraft-createdoc", "p03") != null) { pdfPathP03 = randomPathPdf + "/p03.pdf"; pptxPathP03 = randomPathPptx + "/p03.pptx"; jasperPathP03 = installDir.getAbsolutePath() + "/" + ini.get("pkraft-createdoc", "p03"); jasperFilledPathP03 = (randomPathJasperFilled + "/p03.jasperFilled"); pdfRankFiles.put("0.0.03", pdfPathP03); pptxRankFiles.put("0.0.03", pptxPathP03); } else { System.err.println("no entry 'p03' found in ini file"); System.exit(1); } DateFormat dateFormat = new SimpleDateFormat("dd. MM. yyyy"); Date date = new Date(); report.setParameter("processName", process.getName()); report.setParameter("processVersion", process.getVersion()); report.setParameter("processDatum", dateFormat.format(date)); report.setParameter("processArchitectLogoImagePath", installDir.getAbsolutePath() + "/" + ini.get("pkraft-createdoc", "logo")); report.setParameter("processArchitectCompany", process.getArchitectCompany()); report.setParameter("processArchitectName", process.getArchitectName()); report.setParameter("processArchitectMail", process.getArchitectMail()); report.setParameter("processCustomerCompany", process.getCustomerCompany()); report.setParameter("processCustomerName", process.getCustomerName()); report.setParameter("processCustomerMail", process.getCustomerMail()); try { report.fillReportFileToFile(jasperPathP03, jasperFilledPathP03); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pdf try { report.convertFileToPdf(jasperFilledPathP03, pdfPathP03); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pptx try { report.convertFileToPptx(jasperFilledPathP03, pptxPathP03); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } report = null; //System.exit(0); ////////////////////////////////////////// report = new Reporter(); // P05) erstellen des p05 System.out.println("info: generating p05."); String pdfPathP05 = null; String pptxPathP05 = null; String jasperPathP05 = null; String jasperFilledPathP05 = null; // P05) feststellen, welches jasperreports-template fuer den angeforderten typ verwendet werden soll if (ini.get("pkraft-createdoc", "p05") != null) { pdfPathP05 = randomPathPdf + "/p05.pdf"; pptxPathP05 = randomPathPptx + "/p05.pptx"; jasperPathP05 = installDir.getAbsolutePath() + "/" + ini.get("pkraft-createdoc", "p05"); jasperFilledPathP05 = (randomPathJasperFilled + "/p05.jasperFilled"); pdfRankFiles.put("0.0.05", pdfPathP05); pptxRankFiles.put("0.0.05", pptxPathP05); } else { System.err.println("no entry 'p05' found in ini file"); System.exit(1); } report.setParameter("processName", process.getName()); report.setParameter("processVersion", process.getVersion()); report.setParameter("processArchitectCompany", process.getArchitectCompany()); report.setParameter("processArchitectName", process.getArchitectName()); report.setParameter("processArchitectMail", process.getArchitectMail()); report.setParameter("processCustomerCompany", process.getCustomerCompany()); report.setParameter("processCustomerName", process.getCustomerName()); report.setParameter("processCustomerMail", process.getCustomerMail()); try { report.fillReportFileToFile(jasperPathP05, jasperFilledPathP05); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pdf try { report.convertFileToPdf(jasperFilledPathP05, pdfPathP05); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pptx try { report.convertFileToPptx(jasperFilledPathP05, pptxPathP05); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } report = null; //System.exit(0); ////////////////////////////////////////// report = new Reporter(); // P08) erstellen des p08 System.out.println("info: generating p08."); String pdfPathP08 = null; String pptxPathP08 = null; String jasperPathP08 = null; String jasperFilledPathP08 = null; // P08) feststellen, welches jasperreports-template fuer den angeforderten typ verwendet werden soll if (ini.get("pkraft-createdoc", "p08") != null) { pdfPathP08 = randomPathPdf + "/p08.pdf"; pptxPathP08 = randomPathPptx + "/p08.pptx"; jasperPathP08 = installDir.getAbsolutePath() + "/" + ini.get("pkraft-createdoc", "p08"); jasperFilledPathP08 = (randomPathJasperFilled + "/p08.jasperFilled"); pdfRankFiles.put("0.0.08", pdfPathP08); pptxRankFiles.put("0.0.08", pptxPathP08); } else { System.err.println("no entry 'p08' found in ini file"); System.exit(1); } report.setParameter("processName", process.getName()); report.setParameter("processVersion", process.getVersion()); report.setParameter("processArchitectCompany", process.getArchitectCompany()); report.setParameter("processArchitectName", process.getArchitectName()); report.setParameter("processArchitectMail", process.getArchitectMail()); report.setParameter("processCustomerCompany", process.getCustomerCompany()); report.setParameter("processCustomerName", process.getCustomerName()); report.setParameter("processCustomerMail", process.getCustomerMail()); report.setParameter("processDescription", process.getDescription()); try { report.fillReportFileToFile(jasperPathP08, jasperFilledPathP08); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pdf try { report.convertFileToPdf(jasperFilledPathP08, pdfPathP08); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pptx try { report.convertFileToPptx(jasperFilledPathP08, pptxPathP08); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } report = null; //System.exit(0); ////////////////////////////////////////// report = new Reporter(); // P10) erstellen des p10 System.out.println("info: generating p10."); String pdfPathP10 = null; String pptxPathP10 = null; String jasperPathP10 = null; String jasperFilledPathP10 = null; // P10) feststellen, welches jasperreports-template fuer den angeforderten typ verwendet werden soll if (ini.get("pkraft-createdoc", "p10") != null) { pdfPathP10 = randomPathPdf + "/p10.pdf"; pptxPathP10 = randomPathPptx + "/p10.pptx"; jasperPathP10 = installDir.getAbsolutePath() + "/" + ini.get("pkraft-createdoc", "p10"); jasperFilledPathP10 = (randomPathJasperFilled + "/p10.jasperFilled"); pdfRankFiles.put("0.0.10", pdfPathP10); pptxRankFiles.put("0.0.10", pptxPathP10); } else { System.err.println("no entry 'p10' found in ini file"); System.exit(1); } report.setParameter("processName", process.getName()); report.setParameter("processVersion", process.getVersion()); report.setParameter("processArchitectCompany", process.getArchitectCompany()); report.setParameter("processArchitectName", process.getArchitectName()); report.setParameter("processArchitectMail", process.getArchitectMail()); report.setParameter("processCustomerCompany", process.getCustomerCompany()); report.setParameter("processCustomerName", process.getCustomerName()); report.setParameter("processCustomerMail", process.getCustomerMail()); // rootstep holen Step rootStep = process.getStep(process.getRootstepname()); // ueber alle commit iterieren for (Commit actualCommit : rootStep.getCommit()) { // ueber alle files iterieren for (de.prozesskraft.pkraft.File actualFile : actualCommit.getFile()) { HashMap<String, Object> row = new HashMap<String, Object>(); // Spalte 'origin' row.put("origin", "user/cb2"); // Spalte 'objectType' row.put("objectType", "file"); // Spalte 'minOccur' row.put("minOccur", "" + actualFile.getMinoccur()); // Spalte 'maxOccur' row.put("maxOccur", "" + actualFile.getMaxoccur()); // Spalte 'objectKey' row.put("objectKey", actualFile.getKey()); // die steps herausfinden, die dieses file benoetigen ArrayList<Step> allStepsThatNeedThisFileFromRoot = process.getStepWhichNeedFromRoot("file", actualFile.getKey()); String stepnameListe = ""; for (Step actStep : allStepsThatNeedThisFileFromRoot) { stepnameListe += "\n=> " + actStep.getName(); } // Spalte 'objectDescription' row.put("objectDescription", actualFile.getDescription() + stepnameListe); // Datensatz dem report hinzufuegen report.addField(row); } // ueber alle variablen iterieren for (de.prozesskraft.pkraft.Variable actualVariable : actualCommit.getVariable()) { HashMap<String, Object> row = new HashMap<String, Object>(); // Spalte 'origin' row.put("origin", "user/cb2"); // Spalte 'objectType' row.put("objectType", "variable"); // Spalte 'minOccur' row.put("minOccur", "" + actualVariable.getMinoccur()); // Spalte 'maxOccur' row.put("maxOccur", "" + actualVariable.getMaxoccur()); // Spalte 'objectKey' row.put("objectKey", actualVariable.getKey()); // die steps herausfinden, die dieses file benoetigen ArrayList<Step> allStepsThatNeedThisObjectFromRoot = process.getStepWhichNeedFromRoot("variable", actualVariable.getKey()); String stepnameListe = ""; for (Step actStep : allStepsThatNeedThisObjectFromRoot) { stepnameListe += "\n=> " + actStep.getName(); } // Spalte 'objectDescription' row.put("objectDescription", actualVariable.getDescription() + stepnameListe); // Datensatz dem report hinzufuegen report.addField(row); } } try { report.fillReportFileToFile(jasperPathP10, jasperFilledPathP10); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pdf try { report.convertFileToPdf(jasperFilledPathP10, pdfPathP10); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pptx try { report.convertFileToPptx(jasperFilledPathP10, pptxPathP10); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } report = null; ////////////////////////////////////////// report = new Reporter(); // P20) erstellen des p20 System.out.println("info: generating p20."); String pdfPathP20 = null; String pptxPathP20 = null; String jasperPathP20 = null; String jasperFilledPathP20 = null; // P20) feststellen, welches jasperreports-template fuer den angeforderten typ verwendet werden soll if (ini.get("pkraft-createdoc", "p20") != null) { pdfPathP20 = randomPathPdf + "/p20.pdf"; pptxPathP20 = randomPathPptx + "/p20.pptx"; jasperPathP20 = installDir.getAbsolutePath() + "/" + ini.get("pkraft-createdoc", "p20"); jasperFilledPathP20 = (randomPathJasperFilled + "/p20.jasperFilled"); pdfRankFiles.put("0.0.20", pdfPathP20); pptxRankFiles.put("0.0.20", pptxPathP20); } else { System.err.println("no entry 'p20' found in ini file"); System.exit(1); } report.setParameter("processName", process.getName()); report.setParameter("processVersion", process.getVersion()); report.setParameter("processArchitectCompany", process.getArchitectCompany()); report.setParameter("processArchitectName", process.getArchitectName()); report.setParameter("processArchitectMail", process.getArchitectMail()); report.setParameter("processCustomerCompany", process.getCustomerCompany()); report.setParameter("processCustomerName", process.getCustomerName()); report.setParameter("processCustomerMail", process.getCustomerMail()); // ueber alle steps iterieren (ausser root) for (Step actualStep : (ArrayList<Step>) process.getStep()) { // ueberspringen wenn es sich um root handelt if (!(actualStep.getName().equals(process.getRootstepname()))) { // ueber alle commit iterieren for (Commit actualCommit : actualStep.getCommit()) { // nur die, die toroot=true ( und spaeter auch tosdm=true) if (actualCommit.isTorootPresent()) { // ueber alle files iterieren for (de.prozesskraft.pkraft.File actualFile : actualCommit.getFile()) { HashMap<String, Object> row = new HashMap<String, Object>(); // Spalte 'destination' row.put("destination", "user/cb2"); // Spalte 'objectType' row.put("objectType", "file"); // Spalte 'minOccur' row.put("minOccur", "" + actualFile.getMinoccur()); // Spalte 'maxOccur' row.put("maxOccur", "" + actualFile.getMaxoccur()); // Spalte 'objectKey' row.put("objectKey", actualFile.getKey()); // Spalte 'objectDescription' row.put("objectDescription", actualFile.getDescription() + "\n<= " + actualStep.getName()); // Datensatz dem report hinzufuegen report.addField(row); } // ueber alle variablen iterieren for (de.prozesskraft.pkraft.Variable actualVariable : actualCommit.getVariable()) { HashMap<String, Object> row = new HashMap<String, Object>(); // Spalte 'objectType' row.put("destination", "user/cb2"); // Spalte 'objectType' row.put("objectType", "variable"); // Spalte 'minOccur' row.put("minOccur", "" + actualVariable.getMinoccur()); // Spalte 'maxOccur' row.put("maxOccur", "" + actualVariable.getMaxoccur()); // Spalte 'objectKey' row.put("objectKey", actualVariable.getKey()); // Spalte 'objectDescription' row.put("objectDescription", actualVariable.getDescription() + "\n<= " + actualStep.getName()); // Datensatz dem report hinzufuegen report.addField(row); } } } } } try { report.fillReportFileToFile(jasperPathP20, jasperFilledPathP20); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pdf try { report.convertFileToPdf(jasperFilledPathP20, pdfPathP20); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pptx try { report.convertFileToPptx(jasperFilledPathP20, pptxPathP20); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } report = null; ////////////////////////////////////////// report = new Reporter(); // P30) erstellen des p30 System.out.println("info: generating p30."); String pdfPathP30 = null; String pptxPathP30 = null; String jasperPathP30 = null; String jasperFilledPathP30 = null; // P30) feststellen, welches jasperreports-template fuer den angeforderten typ verwendet werden soll if (ini.get("pkraft-createdoc", "p30") != null) { pdfPathP30 = randomPathPdf + "/p30.pdf"; pptxPathP30 = randomPathPptx + "/p30.pptx"; jasperPathP30 = installDir.getAbsolutePath() + "/" + ini.get("pkraft-createdoc", "p30"); jasperFilledPathP30 = (randomPathJasperFilled + "/p30.jasperFilled"); pdfRankFiles.put("0.0.30", pdfPathP30); pptxRankFiles.put("0.0.30", pptxPathP30); } else { System.err.println("no entry 'p30' found in ini file"); System.exit(1); } report.setParameter("processName", process.getName()); report.setParameter("processVersion", process.getVersion()); report.setParameter("processArchitectCompany", process.getArchitectCompany()); report.setParameter("processArchitectName", process.getArchitectName()); report.setParameter("processArchitectMail", process.getArchitectMail()); report.setParameter("processCustomerCompany", process.getCustomerCompany()); report.setParameter("processCustomerName", process.getCustomerName()); report.setParameter("processCustomerMail", process.getCustomerMail()); // P1) bild an report melden report.setParameter("processTopologyImagePath", processTopologyImagePath); try { report.fillReportFileToFile(jasperPathP30, jasperFilledPathP30); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pdf try { report.convertFileToPdf(jasperFilledPathP30, pdfPathP30); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pptx try { report.convertFileToPptx(jasperFilledPathP30, pptxPathP30); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } report = null; // System.exit(0); ////////////////////////////////////////// report = new Reporter(); // P40) erstellen des p40 System.out.println("info: generating p40."); String pdfPathP40 = null; String pptxPathP40 = null; String jasperPathP40 = null; String jasperFilledPathP40 = null; // P40) feststellen, welches jasperreports-template fuer den angeforderten typ verwendet werden soll if (ini.get("pkraft-createdoc", "p40") != null) { pdfPathP40 = randomPathPdf + "/p40.pdf"; pptxPathP40 = randomPathPptx + "/p40.pptx"; jasperPathP40 = installDir.getAbsolutePath() + "/" + ini.get("pkraft-createdoc", "p40"); jasperFilledPathP40 = (randomPathJasperFilled + "/p40.jasperFilled"); pdfRankFiles.put("0.0.40", pdfPathP40); pptxRankFiles.put("0.0.40", pptxPathP40); } else { System.err.println("no entry 'p40' found in ini file"); System.exit(1); } report.setParameter("processName", process.getName()); report.setParameter("processVersion", process.getVersion()); report.setParameter("processArchitectCompany", process.getArchitectCompany()); report.setParameter("processArchitectName", process.getArchitectName()); report.setParameter("processArchitectMail", process.getArchitectMail()); report.setParameter("processCustomerCompany", process.getCustomerCompany()); report.setParameter("processCustomerName", process.getCustomerName()); report.setParameter("processCustomerMail", process.getCustomerMail()); // P40) bild an report melden report.setParameter("processTopologyImagePath", processTopologyImagePath); // Tabelle erzeugen ArrayList<Step> steps = process.getStep(); for (int x = 0; x < steps.size(); x++) { HashMap<String, Object> row = new HashMap<String, Object>(); Step actualStep = steps.get(x); // erste Spalte ist 'rank' // um die korrekte sortierung zu erhalten soll der rank-string auf jeweils 2 Stellen erweitert werden String[] rankArray = actualStep.getRank().split("\\."); Integer[] rankArrayInt = new Integer[rankArray.length]; for (int y = 0; y < rankArray.length; y++) { rankArrayInt[y] = Integer.parseInt(rankArray[y]); } String rankFormated = String.format("%02d.%02d", rankArrayInt); row.put("stepRank", rankFormated); // zweite Spalte ist 'stepname' row.put("stepName", actualStep.getName()); // System.out.println("stepName: "+actualStep.getName()); // dritte Spalte ist 'Beschreibung' row.put("stepDescription", actualStep.getDescription()); // System.out.println("stepRank: "+actualStep.getDescription()); // wenn nicht der root-step, dann row eintragen if (!(actualStep.getName().equals(process.getRootstepname()))) { report.addField(row); } } try { report.fillReportFileToFile(jasperPathP40, jasperFilledPathP40); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pdf try { report.convertFileToPdf(jasperFilledPathP40, pdfPathP40); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pptx try { report.convertFileToPptx(jasperFilledPathP40, pptxPathP40); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } report = null; ////////////////////////////////////////// // fuer jeden Step einen eigenen Input Report erzeugen for (Step actualStep : process.getStep()) { // root-step ueberspringen if (actualStep.getName().equals(process.getRootstepname())) { System.out.println("skipping step root"); } // alle anderen auswerten else { report = new Reporter(); // P51x) erstellen des p51 System.out.println( "info: generating p51 for step " + actualStep.getRank() + " => " + actualStep.getName()); String stepRank = actualStep.getRank(); String pdfPathP51 = null; String pptxPathP51 = null; String jasperPathP51 = null; String jasperFilledPathP51 = null; // P51x) feststellen, welches jasperreports-template fuer den angeforderten typ verwendet werden soll if (ini.get("pkraft-createdoc", "p51") != null) { pdfPathP51 = randomPathPdf + "/p5." + stepRank + ".1.pdf"; pptxPathP51 = randomPathPptx + "/p5." + stepRank + ".1.pptx"; jasperPathP51 = installDir.getAbsolutePath() + "/" + ini.get("pkraft-createdoc", "p51"); jasperFilledPathP51 = randomPathJasperFilled + "/p5." + stepRank + ".1.jasperFilled"; String[] rankArray = stepRank.split("\\."); Integer[] rankArrayInt = new Integer[rankArray.length]; for (int x = 0; x < rankArray.length; x++) { rankArrayInt[x] = Integer.parseInt(rankArray[x]); } String rankFormated = String.format("%03d.%03d", rankArrayInt); pdfRankFiles.put(rankFormated + ".1", pdfPathP51); pptxRankFiles.put(rankFormated + ".1", pptxPathP51); } else { System.err.println("no entry 'p51' found in ini file"); System.exit(1); } report.setParameter("processName", process.getName()); report.setParameter("processVersion", process.getVersion()); report.setParameter("processArchitectCompany", process.getArchitectCompany()); report.setParameter("processArchitectName", process.getArchitectName()); report.setParameter("processArchitectMail", process.getArchitectMail()); report.setParameter("processCustomerCompany", process.getCustomerCompany()); report.setParameter("processCustomerName", process.getCustomerName()); report.setParameter("processCustomerMail", process.getCustomerMail()); report.setParameter("stepName", actualStep.getName()); report.setParameter("stepRank", stepRank); report.setParameter("stepDescription", actualStep.getDescription()); String aufruf = ""; if (actualStep.getWork() != null) { // zusammensetzen des scriptaufrufs String interpreter = ""; if (actualStep.getWork().getInterpreter() != null) { interpreter = actualStep.getWork().getInterpreter(); } aufruf = interpreter + " " + actualStep.getWork().getCommand(); for (Callitem actualCallitem : actualStep.getWork().getCallitem()) { aufruf += " " + actualCallitem.getPar(); if (!(actualCallitem.getDel() == null)) { aufruf += actualCallitem.getDel(); } if (!(actualCallitem.getVal() == null)) { aufruf += actualCallitem.getVal(); } } } else if (actualStep.getSubprocess() != null) { aufruf = ini.get("apps", "pkraft-startinstance"); aufruf += " --pdomain " + actualStep.getSubprocess().getDomain(); aufruf += " --pname " + actualStep.getSubprocess().getName(); aufruf += " --pversion " + actualStep.getSubprocess().getVersion(); for (Commit actCommit : actualStep.getSubprocess().getStep().getCommit()) { for (de.prozesskraft.pkraft.File actFile : actCommit.getFile()) { aufruf += " --commitfile " + actFile.getGlob(); } for (Variable actVariable : actCommit.getVariable()) { aufruf += " --commitvariable " + actVariable.getKey() + "=" + actVariable.getValue(); } } } report.setParameter("stepWorkCall", aufruf); // P51x) bild an report melden report.setParameter("stepTopologyImagePath", stepTopologyImagePath.get(actualStep.getName())); // ueber alle lists iterieren for (List actualList : actualStep.getList()) { HashMap<String, Object> row = new HashMap<String, Object>(); // Spalte 'Woher?' row.put("origin", "-"); // Spalte 'typ' row.put("objectType", "wert"); // Spalte 'minOccur' row.put("minOccur", "-"); // Spalte 'maxOccur' row.put("maxOccur", "-"); // Spalte 'Label' row.put("objectKey", actualList.getName()); // Spalte 'Label' String listString = actualList.getItem().toString(); row.put("objectDescription", listString.substring(1, listString.length() - 1)); report.addField(row); } // ueber alle inits iterieren for (Init actualInit : actualStep.getInit()) { HashMap<String, Object> row = new HashMap<String, Object>(); // Spalte 'Woher?' if (actualInit.getFromstep().equals(process.getRootstepname())) { row.put("origin", "user/cb2"); } else { row.put("origin", actualInit.getFromstep()); } // Spalte 'typ' row.put("objectType", actualInit.getFromobjecttype()); // Spalte 'minOccur' row.put("minOccur", "" + actualInit.getMinoccur()); // Spalte 'maxOccur' row.put("maxOccur", "" + actualInit.getMaxoccur()); // Spalte 'Label' row.put("objectKey", actualInit.getListname()); // Spalte 'Label' row.put("objectDescription", "-"); report.addField(row); } try { report.fillReportFileToFile(jasperPathP51, jasperFilledPathP51); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pdf try { report.convertFileToPdf(jasperFilledPathP51, pdfPathP51); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pptx try { report.convertFileToPptx(jasperFilledPathP51, pptxPathP51); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } report = null; } } ////////////////////////////////////////// // fuer jeden Step einen eigenen Output Report erzeugen for (Step actualStep : process.getStep()) { // root-step ueberspringen if (actualStep.getName().equals(process.getRootstepname())) { System.out.println("skipping step root"); } // alle anderen auswerten else { report = new Reporter(); // P52x) erstellen des p52 System.out.println( "info: generating p52 for step " + actualStep.getRank() + " => " + actualStep.getName()); String stepRank = actualStep.getRank(); String pdfPathP52 = null; String pptxPathP52 = null; String jasperPathP52 = null; String jasperFilledPathP52 = null; // P52x) feststellen, welches jasperreports-template fuer den angeforderten typ verwendet werden soll if (ini.get("pkraft-createdoc", "p52") != null) { pdfPathP52 = randomPathPdf + "/p5." + stepRank + ".2.pdf"; pptxPathP52 = randomPathPptx + "/p5." + stepRank + ".2.pptx"; jasperPathP52 = installDir.getAbsolutePath() + "/" + ini.get("pkraft-createdoc", "p52"); jasperFilledPathP52 = randomPathJasperFilled + "/p5." + stepRank + ".1.jasperFilled"; String[] rankArray = stepRank.split("\\."); Integer[] rankArrayInt = new Integer[rankArray.length]; for (int x = 0; x < rankArray.length; x++) { rankArrayInt[x] = Integer.parseInt(rankArray[x]); } String rankFormated = String.format("%03d.%03d", rankArrayInt); pdfRankFiles.put(rankFormated + ".2", pdfPathP52); pptxRankFiles.put(rankFormated + ".2", pptxPathP52); } else { System.err.println("no entry 'p52' found in ini file"); System.exit(1); } report.setParameter("processName", process.getName()); report.setParameter("processVersion", process.getVersion()); report.setParameter("processArchitectCompany", process.getArchitectCompany()); report.setParameter("processArchitectName", process.getArchitectName()); report.setParameter("processArchitectMail", process.getArchitectMail()); report.setParameter("processCustomerCompany", process.getCustomerCompany()); report.setParameter("processCustomerName", process.getCustomerName()); report.setParameter("processCustomerMail", process.getCustomerMail()); report.setParameter("stepName", actualStep.getName()); report.setParameter("stepRank", stepRank); // logfile ermitteln String logfile = "-"; if (actualStep.getWork() != null) { if (actualStep.getWork().getLogfile() == null || actualStep.getWork().getLogfile().equals("")) { report.setParameter("stepWorkLogfile", actualStep.getWork().getLogfile()); } } else if (actualStep.getSubprocess() != null) { logfile = ".log"; } report.setParameter("stepWorkLogfile", logfile); // zusammensetzen der return/exitcode informationen String exitInfo = "exit 0 = kein fehler aufgetreten"; exitInfo += "\nexit >0 = ein fehler ist aufgetreten."; if (actualStep.getWork() != null) { for (Exit actualExit : actualStep.getWork().getExit()) { exitInfo += "\nexit " + actualExit.getValue() + " = " + actualExit.getMsg(); } } report.setParameter("stepWorkExit", exitInfo); // P52x) bild an report melden report.setParameter("stepTopologyImagePath", stepTopologyImagePath.get(actualStep.getName())); // ueber alle inits iterieren for (Commit actualCommit : actualStep.getCommit()) { // ueber alle files iterieren for (de.prozesskraft.pkraft.File actualFile : actualCommit.getFile()) { HashMap<String, Object> row = new HashMap<String, Object>(); // Spalte 'destination' if (actualCommit.isTorootPresent()) { row.put("destination", "user/cb2"); } else { row.put("destination", "prozessintern"); } // Spalte 'objectType' row.put("objectType", "file"); // Spalte 'minOccur' row.put("minOccur", "" + actualFile.getMinoccur()); // Spalte 'maxOccur' row.put("maxOccur", "" + actualFile.getMaxoccur()); // Spalte 'objectKey' row.put("objectKey", actualFile.getKey()); // Spalte 'objectDescription' row.put("objectDescription", actualFile.getDescription()); // Datensatz dem report hinzufuegen report.addField(row); } // ueber alle variablen iterieren for (de.prozesskraft.pkraft.Variable actualVariable : actualCommit.getVariable()) { HashMap<String, Object> row = new HashMap<String, Object>(); // Spalte 'destination' if (actualCommit.isTorootPresent()) { row.put("destination", "user/cb2"); } else { row.put("destination", "prozessintern"); } // Spalte 'objectType' row.put("objectType", "variable"); // Spalte 'minOccur' row.put("minOccur", "" + actualVariable.getMinoccur()); // Spalte 'maxOccur' row.put("maxOccur", "" + actualVariable.getMaxoccur()); // Spalte 'objectKey' row.put("objectKey", actualVariable.getKey()); // Spalte 'objectDescription' row.put("objectDescription", actualVariable.getDescription()); // Datensatz dem report hinzufuegen report.addField(row); } } try { report.fillReportFileToFile(jasperPathP52, jasperFilledPathP52); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pdf try { report.convertFileToPdf(jasperFilledPathP52, pdfPathP52); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } // export to pptx try { report.convertFileToPptx(jasperFilledPathP52, pptxPathP52); } catch (FileNotFoundException e) { // TODO Auto-generated catch block e.printStackTrace(); } catch (JRException e) { // TODO Auto-generated catch block e.printStackTrace(); } report = null; } } // warten bis alles auf platte geschrieben ist try { Thread.sleep(1000); } catch (InterruptedException ex) { Thread.currentThread().interrupt(); } // merge and output if (format.equals("pdf")) { mergePdf(pdfRankFiles, output); } else if (format.equals("pptx")) { mergePptx(pptxRankFiles, output); } System.out.println("info: generating process documentation ready."); System.exit(0); }
From source file:de.prozesskraft.pradar.parts.PradarPartUi3.java
/** * @param args/* w ww .j a v a2 s.c o m*/ */ public static void main(String[] args) { /*---------------------------- get options from ini-file ----------------------------*/ File inifile = new java.io.File( WhereAmI.getInstallDirectoryAbsolutePath(PradarPartUi3.class) + "/" + "../etc/pradar-gui.ini"); if (inifile.exists()) { try { ini = new Ini(inifile); } catch (InvalidFileFormatException e1) { // TODO Auto-generated catch block e1.printStackTrace(); } catch (IOException e1) { // TODO Auto-generated catch block e1.printStackTrace(); } } else { System.err.println("ini file does not exist: " + inifile.getAbsolutePath()); System.exit(1); } /*---------------------------- create boolean options ----------------------------*/ Option help = new Option("help", "print this message"); Option v = new Option("v", "prints version and build-date"); /*---------------------------- create argument options ----------------------------*/ Option dbfile = OptionBuilder.withArgName("dbfile").hasArg().withDescription("[optional] dbfile") // .isRequired() .create("dbfile"); /*---------------------------- create options object ----------------------------*/ Options options = new Options(); options.addOption(help); options.addOption(v); options.addOption(dbfile); /*---------------------------- create the parser ----------------------------*/ CommandLineParser parser = new GnuParser(); try { // parse the command line arguments line = parser.parse(options, args); } catch (Exception exp) { // oops, something went wrong System.err.println("Parsing failed. Reason: " + exp.getMessage()); } /*---------------------------- usage/help ----------------------------*/ if (line.hasOption("help")) { HelpFormatter formatter = new HelpFormatter(); // formatter.printHelp("checkin --version [% version %]", options); formatter.printHelp("pradar-gui", options); System.exit(0); } if (line.hasOption("v")) { System.out.println("author: alexander.vogel@caegroup.de"); System.out.println("version: [% version %]"); System.out.println("date: [% date %]"); System.exit(0); } /*---------------------------- die lizenz ueberpruefen und ggf abbrechen ----------------------------*/ // check for valid license ArrayList<String> allPortAtHost = new ArrayList<String>(); allPortAtHost.add(ini.get("license-server", "license-server-1")); allPortAtHost.add(ini.get("license-server", "license-server-2")); allPortAtHost.add(ini.get("license-server", "license-server-3")); MyLicense lic = new MyLicense(allPortAtHost, "1", "user-edition", "0.1"); // lizenz-logging ausgeben for (String actLine : (ArrayList<String>) lic.getLog()) { System.err.println(actLine); } // abbruch, wenn lizenz nicht valide if (!lic.isValid()) { System.exit(1); } /*---------------------------- other things ----------------------------*/ // gui final Display display = new Display(); Realm.runWithDefault(SWTObservables.getRealm(display), new Runnable() { public void run() { try { Shell shell = new Shell(display); shell.setText("pradar " + "[% version %]"); // set an icon if (this.getClass().getResourceAsStream("/logoSymbol50Transp.png") != null) { shell.setImage( new Image(display, this.getClass().getResourceAsStream("/logoSymbol50Transp.png"))); } else if ((new java.io.File("logoSymbol50Transp.png")).exists()) { shell.setImage(new Image(display, "logoSymbol50Transp.png")); } shell.setLayout(new FillLayout()); // shell.setSize(1500, 1000); shell.setMaximized(true); Composite composite = new Composite(shell, SWT.NO_FOCUS); GridLayout gl_composite = new GridLayout(2, false); gl_composite.marginWidth = 0; gl_composite.marginHeight = 0; new PradarPartUi3(composite); try { shell.open(); while (!shell.isDisposed()) { if (!display.readAndDispatch()) { display.sleep(); } } } finally { if (!shell.isDisposed()) { shell.dispose(); } } } finally { display.dispose(); } } }); System.exit(0); }
From source file:copi.ScalaEntryPoint.java
public static void main(String[] args) { /*//from w w w.ja v a 2 s .c o m * Set lwjgl library path so that LWJGL finds the natives depending on * the OS. */ File libDir = new File(path); if (!libDir.exists()) { // create native lib folder libDir.mkdir(); // retrieve os type String osName = System.getProperty("os.name"); // try to determine if the system is 64 bit boolean is64bit = false; if (System.getProperty("os.name").contains("Windows")) { is64bit = (System.getenv("ProgramFiles(x86)") != null); } else { is64bit = (System.getProperty("os.arch").indexOf("64") != -1); } // construct name of native lib file String natLibLWJGL = ""; if (osName.startsWith("Windows")) { natLibLWJGL += "lwjgl"; if (is64bit) natLibLWJGL += "64"; natLibLWJGL += ".dll"; } else if (osName.startsWith("Linux")) { natLibLWJGL += "liblwjgl"; if (is64bit) natLibLWJGL += "64"; natLibLWJGL += ".so"; } else if (osName.startsWith("Mac OS X")) { natLibLWJGL += "liblwjgl"; natLibLWJGL += ".jnilib"; } else { System.out.println("Unsupported OS: " + osName + ". Exiting."); System.exit(-1); } // try to establish an input stream on the native lib inside the jar InputStream fis = ScalaEntryPoint.class.getResourceAsStream("/" + natLibLWJGL); if (fis == null) { System.out.println("Native library file " + natLibLWJGL + " was not found inside JAR."); System.exit(-1); } // establish an output stream on the target file File fOut = new File(path + "/" + natLibLWJGL); try (FileOutputStream fos = new FileOutputStream(fOut)) { // create file at destination if not already existing if (!fOut.exists()) fOut.createNewFile(); // making buffer for copy operation byte[] buffer = new byte[1024]; int readBytes; // Open output stream and copy data between source file in JAR and the temporary file try { while ((readBytes = fis.read(buffer)) != -1) { fos.write(buffer, 0, readBytes); } } finally { fos.close(); fis.close(); } } catch (IOException e) { System.out.println(e.getMessage()); System.exit(-1); } // register shutdown hook JVMShutdownHook jvmShutdownHook = new JVMShutdownHook(); Runtime.getRuntime().addShutdownHook(jvmShutdownHook); } // set lwjgl native library path System.setProperty("org.lwjgl.librarypath", libDir.getAbsolutePath()); // start COPI System.out.println("Starting COPI ..."); (new SICApplicationLogic()).render(); }
From source file:com.milaboratory.mitcr.cli.Main.java
public static void main(String[] args) { int o = 0;/*from w w w . j a v a2 s . c o m*/ BuildInformation buildInformation = BuildInformationProvider.get(); final boolean isProduction = "default".equals(buildInformation.scmBranch); // buildInformation.version != null && buildInformation.version.lastIndexOf("SNAPSHOT") < 0; orderingMap.put(PARAMETERS_SET_OPTION, o++); orderingMap.put(SPECIES_OPTION, o++); orderingMap.put(GENE_OPTION, o++); orderingMap.put(ERROR_CORECTION_LEVEL_OPTION, o++); orderingMap.put(QUALITY_THRESHOLD_OPTION, o++); orderingMap.put(AVERAGE_QUALITY_OPTION, o++); orderingMap.put(LQ_OPTION, o++); orderingMap.put(CLUSTERIZATION_OPTION, o++); orderingMap.put(INCLUDE_CYS_PHE_OPTION, o++); orderingMap.put(LIMIT_OPTION, o++); orderingMap.put(EXPORT_OPTION, o++); orderingMap.put(REPORT_OPTION, o++); orderingMap.put(REPORTING_LEVEL_OPTION, o++); orderingMap.put(PHRED33_OPTION, o++); orderingMap.put(PHRED64_OPTION, o++); orderingMap.put(THREADS_OPTION, o++); orderingMap.put(COMPRESSED_OPTION, o++); orderingMap.put(PRINT_HELP_OPTION, o++); orderingMap.put(PRINT_VERSION_OPTION, o++); orderingMap.put(PRINT_DEBUG_OPTION, o++); options.addOption(OptionBuilder.withArgName("preset name").hasArg() .withDescription("preset of pipeline parameters to use").create(PARAMETERS_SET_OPTION)); options.addOption(OptionBuilder.withArgName("species").hasArg() .withDescription("overrides species ['hs' for Homo sapiens, 'mm' for us Mus musculus] " + "(default for built-in presets is 'hs')") .create(SPECIES_OPTION)); options.addOption(OptionBuilder.withArgName("gene").hasArg() .withDescription("overrides gene: TRB or TRA (default value for built-in parameter sets is TRB)") .create(GENE_OPTION)); options.addOption(OptionBuilder.withArgName("0|1|2").hasArg() .withDescription( "overrides error correction level (0 = don't correct errors, 1 = correct sequenecing " + "errors only (see -" + QUALITY_THRESHOLD_OPTION + " and -" + LQ_OPTION + " options for details), " + "2 = also correct PCR errors (see -" + CLUSTERIZATION_OPTION + " option)") .create(ERROR_CORECTION_LEVEL_OPTION)); options.addOption(OptionBuilder.withArgName("value").hasArg().withDescription( "overrides quality threshold value for segment alignment and bad quality sequences " + "correction algorithms. 0 tells the program not to process quality information. (default is 25)") .create(QUALITY_THRESHOLD_OPTION)); if (!isProduction) options.addOption(OptionBuilder.hasArg(false) .withDescription("use this option to output average instead of " + "maximal, quality for CDR3 nucleotide sequences. (Experimental option, use with caution.)") .create(AVERAGE_QUALITY_OPTION)); options.addOption(OptionBuilder.withArgName("map | drop").hasArg() .withDescription("overrides low quality CDR3s processing strategy (drop = filter off, " + "map = map onto clonotypes created from the high quality CDR3s). This option makes no difference if " + "quality threshold (-" + QUALITY_THRESHOLD_OPTION + " option) is set to 0, or error correction " + "level (-" + ERROR_CORECTION_LEVEL_OPTION + ") is 0.") .create(LQ_OPTION)); options.addOption(OptionBuilder.withArgName("smd | ete").hasArg() .withDescription("overrides the PCR error correction algorithm: smd = \"save my diversity\", " + "ete = \"eliminate these errors\". Default value for built-in parameters is ete.") .create(CLUSTERIZATION_OPTION)); options.addOption(OptionBuilder.withArgName("0|1").hasArg() .withDescription("overrides weather include bounding Cys & Phe into CDR3 sequence") .create(INCLUDE_CYS_PHE_OPTION)); options.addOption( OptionBuilder.withArgName("# of reads").hasArg() .withDescription("limits the number of input sequencing reads, use this parameter to " + "normalize several datasets or to have a glance at the data") .create(LIMIT_OPTION)); options.addOption(OptionBuilder.withArgName("new name").hasArg() .withDescription("use this option to export presets to a local xml files").create(EXPORT_OPTION)); options.addOption(OptionBuilder.withArgName("file name").hasArg() .withDescription("use this option to write analysis report (summary) to file") .create(REPORT_OPTION)); options.addOption(OptionBuilder.withArgName("1|2|3").hasArg(true) .withDescription("output detalization level (1 = simple, 2 = medium, 3 = full, this format " + "could be deserialized using mitcr API). Affects only tab-delimited output. Default value is 3.") .create(REPORTING_LEVEL_OPTION)); options.addOption(OptionBuilder.hasArg(false).withDescription( "add this option if input file is in old illumina format with 64 byte offset for quality " + "string (MiTCR will try to automatically detect file format if one of the \"-phredXX\" options is not provided)") .create(PHRED64_OPTION)); options.addOption(OptionBuilder.hasArg(false) .withDescription("add this option if input file is in Phred+33 format for quality values " + "(MiTCR will try to automatically detect file format if one of the \"-phredXX\" options is not provided)") .create(PHRED33_OPTION)); options.addOption(OptionBuilder.withArgName("threads").hasArg() .withDescription( "specifies the number of CDR3 extraction threads (default = number of available CPU cores)") .create(THREADS_OPTION)); if (!isProduction) options.addOption(OptionBuilder.hasArg(false) .withDescription("use compressed data structures for storing individual " + "clone segments statistics (from which arises the clone segment information). This option reduces required " + "amount of memory, but introduces small stochastic errors into the algorithm which determines clone " + "segments. (Experimental option, use with caution.)") .create(COMPRESSED_OPTION)); options.addOption( OptionBuilder.hasArg(false).withDescription("print this message").create(PRINT_HELP_OPTION)); options.addOption(OptionBuilder.hasArg(false).withDescription("print version information") .create(PRINT_VERSION_OPTION)); options.addOption(OptionBuilder.hasArg(false) .withDescription("print additional information about analysis process").create(PRINT_DEBUG_OPTION)); PosixParser parser = new PosixParser(); try { long input_limit = -1; int threads = Runtime.getRuntime().availableProcessors(); int reporting_level = 3; int ec_level = 2; CommandLine cl = parser.parse(options, args, true); if (cl.hasOption(PRINT_HELP_OPTION)) { printHelp(); return; } boolean averageQuality = cl.hasOption(AVERAGE_QUALITY_OPTION), compressedAggregators = cl.hasOption(COMPRESSED_OPTION); if (cl.hasOption(PRINT_VERSION_OPTION)) { System.out.println("MiTCR by MiLaboratory, version: " + buildInformation.version); System.out.println("Branch: " + buildInformation.scmBranch); System.out.println("Built: " + buildInformation.buildDate + ", " + buildInformation.jdk + " JDK, " + "build machine: " + buildInformation.builtBy); System.out.println("SCM changeset: " + buildInformation.scmChangeset + " (" + buildInformation.scmDate.replace("\"", "") + ")"); return; } //Normal execution String paramName = cl.getOptionValue(PARAMETERS_SET_OPTION); if (paramName == null) { err.println("No parameters set is specified."); return; } Parameters params = ParametersIO.getParameters(paramName); if (params == null) { err.println("No parameters set found with name '" + paramName + "'."); return; } String value; if ((value = cl.getOptionValue(THREADS_OPTION)) != null) threads = Integer.decode(value); if ((value = cl.getOptionValue(REPORTING_LEVEL_OPTION)) != null) reporting_level = Integer.decode(value); if ((value = cl.getOptionValue(LIMIT_OPTION)) != null) input_limit = Long.decode(value); if ((value = cl.getOptionValue(GENE_OPTION)) != null) params.setGene(Gene.fromXML(value)); if ((value = cl.getOptionValue(SPECIES_OPTION)) != null) params.setSpecies(Species.getFromShortName(value)); if ((value = cl.getOptionValue(INCLUDE_CYS_PHE_OPTION)) != null) { if (value.equals("1")) params.getCDR3ExtractorParameters().setIncludeCysPhe(true); else if (value.equals("0")) params.getCDR3ExtractorParameters().setIncludeCysPhe(false); else { err.println("Illegal value for -" + INCLUDE_CYS_PHE_OPTION + " parameter."); return; } } if ((value = cl.getOptionValue(ERROR_CORECTION_LEVEL_OPTION)) != null) { int v = Integer.decode(value); ec_level = v; if (v == 0) { params.setCloneGeneratorParameters(new BasicCloneGeneratorParameters()); params.setClusterizationType(CloneClusterizationType.None); } else if (v == 1) { params.setCloneGeneratorParameters(new LQMappingCloneGeneratorParameters()); params.setClusterizationType(CloneClusterizationType.None); } else if (v == 2) { params.setCloneGeneratorParameters(new LQMappingCloneGeneratorParameters()); params.setClusterizationType(CloneClusterizationType.OneMismatch, .1f); } else throw new RuntimeException("This (" + v + ") error correction level is not supported."); } if ((value = cl.getOptionValue(QUALITY_THRESHOLD_OPTION)) != null) { int v = Integer.decode(value); if (v == 0) params.setQualityInterpretationStrategy(new DummyQualityInterpretationStrategy()); else params.setQualityInterpretationStrategy(new IlluminaQualityInterpretationStrategy((byte) v)); } if ((value = cl.getOptionValue(LQ_OPTION)) != null) if (ec_level > 0) switch (value) { case "map": params.setCloneGeneratorParameters(new LQMappingCloneGeneratorParameters( ((BasicCloneGeneratorParameters) params.getCloneGeneratorParameters()) .getSegmentInformationAggregationFactor(), 3, true)); break; case "drop": params.setCloneGeneratorParameters(new LQFilteringOffCloneGeneratorParameters( ((BasicCloneGeneratorParameters) params.getCloneGeneratorParameters()) .getSegmentInformationAggregationFactor())); break; default: throw new RuntimeException("Wrong value for -" + LQ_OPTION + " option."); } if ((value = cl.getOptionValue(CLUSTERIZATION_OPTION)) != null) if (ec_level > 1) // == 2 switch (value) { case "smd": params.setClusterizationType(CloneClusterizationType.V2D1J2T3Explicit); break; case "ete": params.setClusterizationType(CloneClusterizationType.OneMismatch); break; default: throw new RuntimeException("Wrong value for -" + CLUSTERIZATION_OPTION + " option."); } ((BasicCloneGeneratorParameters) params.getCloneGeneratorParameters()) .setAccumulatorType(AccumulatorType.get(compressedAggregators, averageQuality)); if ((value = cl.getOptionValue(EXPORT_OPTION)) != null) { //Exporting parameters ParametersIO.exportParameters(params, value); return; } String[] offArgs = cl.getArgs(); if (offArgs.length == 0) { err.println("Input file not specified."); return; } else if (offArgs.length == 1) { err.println("Output file not specified."); return; } else if (offArgs.length > 2) { err.println("Unrecognized argument."); return; } String inputFileName = offArgs[0]; String outputFileName = offArgs[1]; File input = new File(inputFileName); if (!input.exists()) { err.println("Input file not found."); return; } //TODO This also done inside SFastqReader constructor CompressionType compressionType = CompressionType.None; if (inputFileName.endsWith(".gz")) compressionType = CompressionType.GZIP; QualityFormat format = null; // If variable remains null file format will be detected automatically if (cl.hasOption(PHRED33_OPTION)) format = QualityFormat.Phred33; if (cl.hasOption(PHRED64_OPTION)) if (format == null) format = QualityFormat.Phred64; else { err.println( "Options: -" + PHRED33_OPTION + " and -" + PHRED64_OPTION + " are mutually exclusive"); return; } SFastqReader reads = format == null ? new SFastqReader(input, compressionType) : new SFastqReader(input, format, compressionType); OutputPort<SSequencingRead> inputToPipeline = reads; if (input_limit >= 0) inputToPipeline = new CountLimitingOutputPort<>(inputToPipeline, input_limit); SegmentLibrary library = DefaultSegmentLibrary.load(); AnalysisStatisticsAggregator statisticsAggregator = new AnalysisStatisticsAggregator(); FullPipeline pipeline = new FullPipeline(inputToPipeline, params, false, library); pipeline.setThreads(threads); pipeline.setAnalysisListener(statisticsAggregator); new Thread(new SmartProgressReporter(pipeline, err)).start(); // Printing status to the standard error stream pipeline.run(); if (cl.hasOption(PRINT_DEBUG_OPTION)) { err.println("Memory = " + (Runtime.getRuntime().totalMemory() - Runtime.getRuntime().freeMemory())); err.println("Clusterization: " + pipeline.getQC().getReadsClusterized() + "% of reads, " + pipeline.getQC().getClonesClusterized() + " % clones"); } CloneSetClustered cloneSet = pipeline.getResult(); if ((value = cl.getOptionValue(REPORT_OPTION)) != null) { File file = new File(value); TablePrintStreamAdapter table; if (file.exists()) table = new TablePrintStreamAdapter(new FileOutputStream(file, true)); else { table = new TablePrintStreamAdapter(file); ReportExporter.printHeader(table); } //CloneSetQualityControl qc = new CloneSetQualityControl(library, params.getSpecies(), params.getGene(), cloneSet); ReportExporter.printRow(table, inputFileName, outputFileName, pipeline.getQC(), statisticsAggregator); table.close(); } if (outputFileName.endsWith(".cls")) ClsExporter.export(pipeline, outputFileName.replace(".cls", "") + " " + new Date().toString(), input.getName(), outputFileName); else { //Dry run if (outputFileName.startsWith("-")) return; ExportDetalizationLevel detalization = ExportDetalizationLevel.fromLevel(reporting_level); CompressionType compressionType1 = CompressionType.None; if (outputFileName.endsWith(".gz")) compressionType1 = CompressionType.GZIP; CloneSetIO.exportCloneSet(outputFileName, cloneSet, detalization, params, input.getAbsolutePath(), compressionType1); } } catch (ParseException | RuntimeException | IOException e) { err.println("Error occurred in the analysis pipeline."); err.println(); e.printStackTrace(); //printHelp(); } }
From source file:ch.kostceco.tools.kostval.KOSTVal.java
/** Die Eingabe besteht aus 2 oder 3 Parameter: [0] Validierungstyp [1] Pfad zur Val-File [2] * option: Verbose//from w ww. ja v a 2 s . co m * * @param args * @throws IOException */ @SuppressWarnings("unused") public static void main(String[] args) throws IOException { ApplicationContext context = new ClassPathXmlApplicationContext("classpath:config/applicationContext.xml"); // Zeitstempel Start java.util.Date nowStart = new java.util.Date(); java.text.SimpleDateFormat sdfStart = new java.text.SimpleDateFormat("dd.MM.yyyy HH:mm:ss"); String ausgabeStart = sdfStart.format(nowStart); /* TODO: siehe Bemerkung im applicationContext-services.xml bezglich Injection in der * Superklasse aller Impl-Klassen ValidationModuleImpl validationModuleImpl = * (ValidationModuleImpl) context.getBean("validationmoduleimpl"); */ KOSTVal kostval = (KOSTVal) context.getBean("kostval"); File configFile = new File("configuration" + File.separator + "kostval.conf.xml"); // Ueberprfung des Parameters (Log-Verzeichnis) String pathToLogfile = kostval.getConfigurationService().getPathToLogfile(); File directoryOfLogfile = new File(pathToLogfile); if (!directoryOfLogfile.exists()) { directoryOfLogfile.mkdir(); } // Im Logverzeichnis besteht kein Schreibrecht if (!directoryOfLogfile.canWrite()) { System.out.println( kostval.getTextResourceService().getText(ERROR_LOGDIRECTORY_NOTWRITABLE, directoryOfLogfile)); System.exit(1); } if (!directoryOfLogfile.isDirectory()) { System.out.println(kostval.getTextResourceService().getText(ERROR_LOGDIRECTORY_NODIRECTORY)); System.exit(1); } // Ist die Anzahl Parameter (mind. 2) korrekt? if (args.length < 2) { System.out.println(kostval.getTextResourceService().getText(ERROR_PARAMETER_USAGE)); System.exit(1); } File valDatei = new File(args[1]); File logDatei = null; logDatei = valDatei; // Informationen zum Arbeitsverzeichnis holen String pathToWorkDir = kostval.getConfigurationService().getPathToWorkDir(); /* Nicht vergessen in "src/main/resources/config/applicationContext-services.xml" beim * entsprechenden Modul die property anzugeben: <property name="configurationService" * ref="configurationService" /> */ // Informationen holen, welche Formate validiert werden sollen String pdfaValidation = kostval.getConfigurationService().pdfaValidation(); String siardValidation = kostval.getConfigurationService().siardValidation(); String tiffValidation = kostval.getConfigurationService().tiffValidation(); String jp2Validation = kostval.getConfigurationService().jp2Validation(); // Konfiguration des Loggings, ein File Logger wird zustzlich erstellt LogConfigurator logConfigurator = (LogConfigurator) context.getBean("logconfigurator"); String logFileName = logConfigurator.configure(directoryOfLogfile.getAbsolutePath(), logDatei.getName()); File logFile = new File(logFileName); // Ab hier kann ins log geschrieben werden... String formatValOn = ""; // ermitteln welche Formate validiert werden knnen respektive eingeschaltet sind if (pdfaValidation.equals("yes")) { formatValOn = "PDF/A"; if (tiffValidation.equals("yes")) { formatValOn = formatValOn + ", TIFF"; } if (jp2Validation.equals("yes")) { formatValOn = formatValOn + ", JP2"; } if (siardValidation.equals("yes")) { formatValOn = formatValOn + ", SIARD"; } } else if (tiffValidation.equals("yes")) { formatValOn = "TIFF"; if (jp2Validation.equals("yes")) { formatValOn = formatValOn + ", JP2"; } if (siardValidation.equals("yes")) { formatValOn = formatValOn + ", SIARD"; } } else if (jp2Validation.equals("yes")) { formatValOn = "JP2"; if (siardValidation.equals("yes")) { formatValOn = formatValOn + ", SIARD"; } } else if (siardValidation.equals("yes")) { formatValOn = "SIARD"; } LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_HEADER)); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_START, ausgabeStart)); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_END)); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_FORMATON, formatValOn)); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_INFO)); System.out.println("KOST-Val"); System.out.println(""); if (args[0].equals("--format") && formatValOn.equals("")) { // Formatvalidierung aber alle Formate ausgeschlossen LOGGER.logError(kostval.getTextResourceService().getText(ERROR_IOE, kostval.getTextResourceService().getText(ERROR_NOFILEENDINGS))); System.out.println(kostval.getTextResourceService().getText(ERROR_NOFILEENDINGS)); System.exit(1); } File xslOrig = new File("resources" + File.separator + "kost-val.xsl"); File xslCopy = new File(directoryOfLogfile.getAbsolutePath() + File.separator + "kost-val.xsl"); if (!xslCopy.exists()) { Util.copyFile(xslOrig, xslCopy); } File tmpDir = new File(pathToWorkDir); /* bestehendes Workverzeichnis Abbruch wenn nicht leer, da am Schluss das Workverzeichnis * gelscht wird und entsprechend bestehende Dateien gelscht werden knnen */ if (tmpDir.exists()) { if (tmpDir.isDirectory()) { // Get list of file in the directory. When its length is not zero the folder is not empty. String[] files = tmpDir.list(); if (files.length > 0) { LOGGER.logError(kostval.getTextResourceService().getText(ERROR_IOE, kostval.getTextResourceService().getText(ERROR_WORKDIRECTORY_EXISTS, pathToWorkDir))); System.out.println( kostval.getTextResourceService().getText(ERROR_WORKDIRECTORY_EXISTS, pathToWorkDir)); System.exit(1); } } } // Im Pfad keine Sonderzeichen xml-Validierung SIP 1d und SIARD C strzen ab String patternStr = "[^!#\\$%\\(\\)\\+,\\-_\\.=@\\[\\]\\{\\}\\~:\\\\a-zA-Z0-9 ]"; Pattern pattern = Pattern.compile(patternStr); String name = tmpDir.getAbsolutePath(); String[] pathElements = name.split("/"); for (int i = 0; i < pathElements.length; i++) { String element = pathElements[i]; Matcher matcher = pattern.matcher(element); boolean matchFound = matcher.find(); if (matchFound) { LOGGER.logError(kostval.getTextResourceService().getText(ERROR_IOE, kostval.getTextResourceService().getText(ERROR_SPECIAL_CHARACTER, name))); System.out.println(kostval.getTextResourceService().getText(ERROR_SPECIAL_CHARACTER, name)); System.exit(1); } } // die Anwendung muss mindestens unter Java 6 laufen String javaRuntimeVersion = System.getProperty("java.vm.version"); if (javaRuntimeVersion.compareTo("1.6.0") < 0) { LOGGER.logError(kostval.getTextResourceService().getText(ERROR_IOE, kostval.getTextResourceService().getText(ERROR_WRONG_JRE))); System.out.println(kostval.getTextResourceService().getText(ERROR_WRONG_JRE)); System.exit(1); } // bestehendes Workverzeichnis wieder anlegen if (!tmpDir.exists()) { tmpDir.mkdir(); } // Im workverzeichnis besteht kein Schreibrecht if (!tmpDir.canWrite()) { LOGGER.logError(kostval.getTextResourceService().getText(ERROR_IOE, kostval.getTextResourceService().getText(ERROR_WORKDIRECTORY_NOTWRITABLE, tmpDir))); System.out.println(kostval.getTextResourceService().getText(ERROR_WORKDIRECTORY_NOTWRITABLE, tmpDir)); System.exit(1); } /* Vorberitung fr eine allfllige Festhaltung bei unterschiedlichen PDFA-Validierungsresultaten * in einer PDF_Diagnosedatei sowie Zhler der SIP-Dateiformate */ String diaPath = kostval.getConfigurationService().getPathToDiagnose(); // Im diaverzeichnis besteht kein Schreibrecht File diaDir = new File(diaPath); if (!diaDir.exists()) { diaDir.mkdir(); } if (!diaDir.canWrite()) { LOGGER.logError(kostval.getTextResourceService().getText(ERROR_IOE, kostval.getTextResourceService().getText(ERROR_DIADIRECTORY_NOTWRITABLE, diaDir))); System.out.println(kostval.getTextResourceService().getText(ERROR_DIADIRECTORY_NOTWRITABLE, diaDir)); System.exit(1); } File xmlDiaOrig = new File("resources" + File.separator + "KaD-Diagnosedaten.kost-val.xml"); File xmlDiaCopy = new File(diaPath + File.separator + "KaD-Diagnosedaten.kost-val.xml"); if (!xmlDiaCopy.exists()) { Util.copyFile(xmlDiaOrig, xmlDiaCopy); } File xslDiaOrig = new File("resources" + File.separator + "kost-val_KaDdia.xsl"); File xslDiaCopy = new File(diaPath + File.separator + "kost-val_KaDdia.xsl"); if (!xslDiaCopy.exists()) { Util.copyFile(xslDiaOrig, xslDiaCopy); } /* Ueberprfung des optionalen Parameters (2 -v --> im Verbose-mode werden die originalen Logs * nicht gelscht (PDFTron, Jhove & Co.) */ boolean verbose = false; if (args.length > 2) { if (!(args[2].equals("-v"))) { LOGGER.logError(kostval.getTextResourceService().getText(ERROR_IOE, kostval.getTextResourceService().getText(ERROR_PARAMETER_OPTIONAL_1))); System.out.println(kostval.getTextResourceService().getText(ERROR_PARAMETER_OPTIONAL_1)); System.exit(1); } else { verbose = true; } } /* Initialisierung TIFF-Modul B (JHove-Validierung) berprfen der Konfiguration: existiert die * jhove.conf am angebenen Ort? */ String jhoveConf = kostval.getConfigurationService().getPathToJhoveConfiguration(); File fJhoveConf = new File(jhoveConf); if (!fJhoveConf.exists() || !fJhoveConf.getName().equals("jhove.conf")) { LOGGER.logError(kostval.getTextResourceService().getText(ERROR_IOE, kostval.getTextResourceService().getText(ERROR_JHOVECONF_MISSING))); System.out.println(kostval.getTextResourceService().getText(ERROR_JHOVECONF_MISSING)); System.exit(1); } // Im Pfad keine Sonderzeichen xml-Validierung SIP 1d und SIARD C strzen ab name = valDatei.getAbsolutePath(); pathElements = name.split("/"); for (int i = 0; i < pathElements.length; i++) { String element = pathElements[i]; Matcher matcher = pattern.matcher(element); boolean matchFound = matcher.find(); if (matchFound) { LOGGER.logError(kostval.getTextResourceService().getText(ERROR_IOE, kostval.getTextResourceService().getText(ERROR_SPECIAL_CHARACTER, name))); System.out.println(kostval.getTextResourceService().getText(ERROR_SPECIAL_CHARACTER, name)); System.exit(1); } } // Ueberprfung des Parameters (Val-Datei): existiert die Datei? if (!valDatei.exists()) { LOGGER.logError(kostval.getTextResourceService().getText(ERROR_IOE, kostval.getTextResourceService().getText(ERROR_VALFILE_FILENOTEXISTING))); System.out.println(kostval.getTextResourceService().getText(ERROR_VALFILE_FILENOTEXISTING)); System.exit(1); } if (args[0].equals("--format")) { LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_FORMAT1)); Integer countNio = 0; Integer countSummaryNio = 0; Integer count = 0; Integer pdfaCountIo = 0; Integer pdfaCountNio = 0; Integer siardCountIo = 0; Integer siardCountNio = 0; Integer tiffCountIo = 0; Integer tiffCountNio = 0; Integer jp2CountIo = 0; Integer jp2CountNio = 0; // TODO: Formatvalidierung an einer Datei --> erledigt --> nur Marker if (!valDatei.isDirectory()) { boolean valFile = valFile(valDatei, logFileName, directoryOfLogfile, verbose); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_FORMAT2)); // Lschen des Arbeitsverzeichnisses, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_LOGEND)); // Zeitstempel End java.util.Date nowEnd = new java.util.Date(); java.text.SimpleDateFormat sdfEnd = new java.text.SimpleDateFormat("dd.MM.yyyy HH:mm:ss"); String ausgabeEnd = sdfEnd.format(nowEnd); ausgabeEnd = "<End>" + ausgabeEnd + "</End>"; Util.valEnd(ausgabeEnd, logFile); Util.amp(logFile); // Die Konfiguration hereinkopieren try { DocumentBuilderFactory factory = DocumentBuilderFactory.newInstance(); factory.setValidating(false); factory.setExpandEntityReferences(false); Document docConfig = factory.newDocumentBuilder().parse(configFile); NodeList list = docConfig.getElementsByTagName("configuration"); Element element = (Element) list.item(0); Document docLog = factory.newDocumentBuilder().parse(logFile); Node dup = docLog.importNode(element, true); docLog.getDocumentElement().appendChild(dup); FileWriter writer = new FileWriter(logFile); ByteArrayOutputStream baos = new ByteArrayOutputStream(); ElementToStream(docLog.getDocumentElement(), baos); String stringDoc2 = new String(baos.toByteArray()); writer.write(stringDoc2); writer.close(); // Der Header wird dabei leider verschossen, wieder zurck ndern String newstring = kostval.getTextResourceService().getText(MESSAGE_XML_HEADER); String oldstring = "<?xml version=\"1.0\" encoding=\"UTF-8\"?><KOSTValLog>"; Util.oldnewstring(oldstring, newstring, logFile); } catch (Exception e) { LOGGER.logError("<Error>" + kostval.getTextResourceService().getText(ERROR_XML_UNKNOWN, e.getMessage())); System.out.println("Exception: " + e.getMessage()); } if (valFile) { // Lschen des Arbeitsverzeichnisses, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } // Validierte Datei valide System.exit(0); } else { // Lschen des Arbeitsverzeichnisses, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } // Fehler in Validierte Datei --> invalide System.exit(2); } } else { // TODO: Formatvalidierung ber ein Ordner --> erledigt --> nur Marker Map<String, File> fileMap = Util.getFileMap(valDatei, false); Set<String> fileMapKeys = fileMap.keySet(); for (Iterator<String> iterator = fileMapKeys.iterator(); iterator.hasNext();) { String entryName = iterator.next(); File newFile = fileMap.get(entryName); if (!newFile.isDirectory()) { valDatei = newFile; count = count + 1; // Ausgabe Dateizhler Ersichtlich das KOST-Val Dateien durchsucht System.out.print(count + " "); System.out.print("\r"); if (((valDatei.getAbsolutePath().toLowerCase().endsWith(".jp2"))) && jp2Validation.equals("yes")) { boolean valFile = valFile(valDatei, logFileName, directoryOfLogfile, verbose); // Lschen des Arbeitsverzeichnisses, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } if (valFile) { jp2CountIo = jp2CountIo + 1; // Lschen des Arbeitsverzeichnisses, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } } else { jp2CountNio = jp2CountNio + 1; // Lschen des Arbeitsverzeichnisses, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } } } else if (((valDatei.getAbsolutePath().toLowerCase().endsWith(".tiff") || valDatei.getAbsolutePath().toLowerCase().endsWith(".tif"))) && tiffValidation.equals("yes")) { boolean valFile = valFile(valDatei, logFileName, directoryOfLogfile, verbose); // Lschen des Arbeitsverzeichnisses, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } if (valFile) { tiffCountIo = tiffCountIo + 1; // Lschen des Arbeitsverzeichnisses, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } } else { tiffCountNio = tiffCountNio + 1; // Lschen des Arbeitsverzeichnisses, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } } } else if ((valDatei.getAbsolutePath().toLowerCase().endsWith(".siard")) && siardValidation.equals("yes")) { boolean valFile = valFile(valDatei, logFileName, directoryOfLogfile, verbose); // Lschen des Arbeitsverzeichnisses, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } if (valFile) { siardCountIo = siardCountIo + 1; // Lschen des Arbeitsverzeichnisses, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } } else { siardCountNio = siardCountNio + 1; // Lschen des Arbeitsverzeichnisses, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } } } else if (((valDatei.getAbsolutePath().toLowerCase().endsWith(".pdf") || valDatei.getAbsolutePath().toLowerCase().endsWith(".pdfa"))) && pdfaValidation.equals("yes")) { boolean valFile = valFile(valDatei, logFileName, directoryOfLogfile, verbose); // Lschen des Arbeitsverzeichnisses, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } if (valFile) { pdfaCountIo = pdfaCountIo + 1; // Lschen des Arbeitsverzeichnisses, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } } else { pdfaCountNio = pdfaCountNio + 1; // Lschen des Arbeitsverzeichnisses, falls eines angelegt wurde if (tmpDir.exists()) { Util.deleteDir(tmpDir); } } } else { countNio = countNio + 1; } } } System.out.print(" "); System.out.print("\r"); if (countNio.equals(count)) { // keine Dateien Validiert LOGGER.logError( kostval.getTextResourceService().getText(ERROR_INCORRECTFILEENDINGS, formatValOn)); System.out.println( kostval.getTextResourceService().getText(ERROR_INCORRECTFILEENDINGS, formatValOn)); } LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_FORMAT2)); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_LOGEND)); // Zeitstempel End java.util.Date nowEnd = new java.util.Date(); java.text.SimpleDateFormat sdfEnd = new java.text.SimpleDateFormat("dd.MM.yyyy HH:mm:ss"); String ausgabeEnd = sdfEnd.format(nowEnd); ausgabeEnd = "<End>" + ausgabeEnd + "</End>"; Util.valEnd(ausgabeEnd, logFile); Util.amp(logFile); // Die Konfiguration hereinkopieren try { DocumentBuilderFactory factory = DocumentBuilderFactory.newInstance(); factory.setValidating(false); factory.setExpandEntityReferences(false); Document docConfig = factory.newDocumentBuilder().parse(configFile); NodeList list = docConfig.getElementsByTagName("configuration"); Element element = (Element) list.item(0); Document docLog = factory.newDocumentBuilder().parse(logFile); Node dup = docLog.importNode(element, true); docLog.getDocumentElement().appendChild(dup); FileWriter writer = new FileWriter(logFile); ByteArrayOutputStream baos = new ByteArrayOutputStream(); ElementToStream(docLog.getDocumentElement(), baos); String stringDoc2 = new String(baos.toByteArray()); writer.write(stringDoc2); writer.close(); // Der Header wird dabei leider verschossen, wieder zurck ndern String newstring = kostval.getTextResourceService().getText(MESSAGE_XML_HEADER); String oldstring = "<?xml version=\"1.0\" encoding=\"UTF-8\"?><KOSTValLog>"; Util.oldnewstring(oldstring, newstring, logFile); } catch (Exception e) { LOGGER.logError("<Error>" + kostval.getTextResourceService().getText(ERROR_XML_UNKNOWN, e.getMessage())); System.out.println("Exception: " + e.getMessage()); } countSummaryNio = pdfaCountNio + siardCountNio + tiffCountNio + jp2CountNio; if (countNio.equals(count)) { // keine Dateien Validiert bestehendes Workverzeichnis ggf. lschen if (tmpDir.exists()) { Util.deleteDir(tmpDir); } System.exit(1); } else if (countSummaryNio == 0) { // bestehendes Workverzeichnis ggf. lschen if (tmpDir.exists()) { Util.deleteDir(tmpDir); } // alle Validierten Dateien valide System.exit(0); } else { // bestehendes Workverzeichnis ggf. lschen if (tmpDir.exists()) { Util.deleteDir(tmpDir); } // Fehler in Validierten Dateien --> invalide System.exit(2); } if (tmpDir.exists()) { Util.deleteDir(tmpDir); tmpDir.deleteOnExit(); } } LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_FORMAT2)); } else if (args[0].equals("--sip")) { LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_FORMAT1)); // TODO: Sipvalidierung --> erledigt --> nur Marker boolean validFormat = false; File originalSipFile = valDatei; File unSipFile = valDatei; File outputFile3c = null; String fileName3c = null; File tmpDirZip = null; // zuerst eine Formatvalidierung ber den Content dies ist analog aufgebaut wie --format Integer countNio = 0; Integer countSummaryNio = 0; Integer countSummaryIo = 0; Integer count = 0; Integer pdfaCountIo = 0; Integer pdfaCountNio = 0; Integer siardCountIo = 0; Integer siardCountNio = 0; Integer tiffCountIo = 0; Integer tiffCountNio = 0; Integer jp2CountIo = 0; Integer jp2CountNio = 0; if (!valDatei.isDirectory()) { Boolean zip = false; // Eine ZIP Datei muss mit PK.. beginnen if ((valDatei.getAbsolutePath().toLowerCase().endsWith(".zip") || valDatei.getAbsolutePath().toLowerCase().endsWith(".zip64"))) { FileReader fr = null; try { fr = new FileReader(valDatei); BufferedReader read = new BufferedReader(fr); // Hex 03 in Char umwandeln String str3 = "03"; int i3 = Integer.parseInt(str3, 16); char c3 = (char) i3; // Hex 04 in Char umwandeln String str4 = "04"; int i4 = Integer.parseInt(str4, 16); char c4 = (char) i4; // auslesen der ersten 4 Zeichen der Datei int length; int i; char[] buffer = new char[4]; length = read.read(buffer); for (i = 0; i != length; i++) ; // die beiden charArrays (soll und ist) mit einander vergleichen char[] charArray1 = buffer; char[] charArray2 = new char[] { 'P', 'K', c3, c4 }; if (Arrays.equals(charArray1, charArray2)) { // hchstwahrscheinlich ein ZIP da es mit 504B0304 respektive PK.. beginnt zip = true; } } catch (Exception e) { LOGGER.logError("<Error>" + kostval.getTextResourceService().getText(ERROR_XML_UNKNOWN, e.getMessage())); System.out.println("Exception: " + e.getMessage()); } } // wenn die Datei kein Directory ist, muss sie mit zip oder zip64 enden if ((!(valDatei.getAbsolutePath().toLowerCase().endsWith(".zip") || valDatei.getAbsolutePath().toLowerCase().endsWith(".zip64"))) || zip == false) { // Abbruch! D.h. Sip message beginnen, Meldung und Beenden ab hier bis System.exit( 1 ); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_FORMAT2)); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_SIP1)); valDatei = originalSipFile; LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_VALERGEBNIS)); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_VALTYPE, kostval.getTextResourceService().getText(MESSAGE_SIPVALIDATION))); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_VALFILE, valDatei.getAbsolutePath())); System.out.println(kostval.getTextResourceService().getText(MESSAGE_SIPVALIDATION)); System.out.println(valDatei.getAbsolutePath()); // die eigentliche Fehlermeldung LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_MODUL_Aa_SIP) + kostval.getTextResourceService().getText(ERROR_XML_AA_INCORRECTFILEENDING)); System.out.println(kostval.getTextResourceService().getText(ERROR_XML_AA_INCORRECTFILEENDING)); // Fehler im Validierten SIP --> invalide & Abbruch LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_VALERGEBNIS_INVALID)); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_VALERGEBNIS_CLOSE)); System.out.println("Invalid"); System.out.println(""); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_SIP2)); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_LOGEND)); // Zeitstempel End java.util.Date nowEnd = new java.util.Date(); java.text.SimpleDateFormat sdfEnd = new java.text.SimpleDateFormat("dd.MM.yyyy HH:mm:ss"); String ausgabeEnd = sdfEnd.format(nowEnd); ausgabeEnd = "<End>" + ausgabeEnd + "</End>"; Util.valEnd(ausgabeEnd, logFile); Util.amp(logFile); // Die Konfiguration hereinkopieren try { DocumentBuilderFactory factory = DocumentBuilderFactory.newInstance(); factory.setValidating(false); factory.setExpandEntityReferences(false); Document docConfig = factory.newDocumentBuilder().parse(configFile); NodeList list = docConfig.getElementsByTagName("configuration"); Element element = (Element) list.item(0); Document docLog = factory.newDocumentBuilder().parse(logFile); Node dup = docLog.importNode(element, true); docLog.getDocumentElement().appendChild(dup); FileWriter writer = new FileWriter(logFile); ByteArrayOutputStream baos = new ByteArrayOutputStream(); ElementToStream(docLog.getDocumentElement(), baos); String stringDoc2 = new String(baos.toByteArray()); writer.write(stringDoc2); writer.close(); // Der Header wird dabei leider verschossen, wieder zurck ndern String newstring = kostval.getTextResourceService().getText(MESSAGE_XML_HEADER); String oldstring = "<?xml version=\"1.0\" encoding=\"UTF-8\"?><KOSTValLog>"; Util.oldnewstring(oldstring, newstring, logFile); } catch (Exception e) { LOGGER.logError("<Error>" + kostval.getTextResourceService().getText(ERROR_XML_UNKNOWN, e.getMessage())); System.out.println("Exception: " + e.getMessage()); } // bestehendes Workverzeichnis ggf. lschen if (tmpDir.exists()) { Util.deleteDir(tmpDir); } System.exit(1); } else { // geziptes SIP --> in temp dir entzipen String toplevelDir = valDatei.getName(); int lastDotIdx = toplevelDir.lastIndexOf("."); toplevelDir = toplevelDir.substring(0, lastDotIdx); tmpDirZip = new File( tmpDir.getAbsolutePath() + File.separator + "ZIP" + File.separator + toplevelDir); try { Zip64Archiver.unzip(valDatei.getAbsolutePath(), tmpDirZip.getAbsolutePath()); } catch (Exception e) { try { Zip64Archiver.unzip64(valDatei, tmpDirZip); } catch (Exception e1) { // Abbruch! D.h. Sip message beginnen, Meldung und Beenden ab hier bis System.exit LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_FORMAT2)); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_SIP1)); valDatei = originalSipFile; LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_VALERGEBNIS)); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_VALTYPE, kostval.getTextResourceService().getText(MESSAGE_SIPVALIDATION))); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_VALFILE, valDatei.getAbsolutePath())); System.out.println(kostval.getTextResourceService().getText(MESSAGE_SIPVALIDATION)); System.out.println(valDatei.getAbsolutePath()); // die eigentliche Fehlermeldung LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_MODUL_Aa_SIP) + kostval.getTextResourceService().getText(ERROR_XML_AA_CANNOTEXTRACTZIP)); System.out.println( kostval.getTextResourceService().getText(ERROR_XML_AA_CANNOTEXTRACTZIP)); // Fehler im Validierten SIP --> invalide & Abbruch LOGGER.logError( kostval.getTextResourceService().getText(MESSAGE_XML_VALERGEBNIS_INVALID)); LOGGER.logError( kostval.getTextResourceService().getText(MESSAGE_XML_VALERGEBNIS_CLOSE)); System.out.println("Invalid"); System.out.println(""); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_SIP2)); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_LOGEND)); // Zeitstempel End java.util.Date nowEnd = new java.util.Date(); java.text.SimpleDateFormat sdfEnd = new java.text.SimpleDateFormat( "dd.MM.yyyy HH:mm:ss"); String ausgabeEnd = sdfEnd.format(nowEnd); ausgabeEnd = "<End>" + ausgabeEnd + "</End>"; Util.valEnd(ausgabeEnd, logFile); Util.amp(logFile); // Die Konfiguration hereinkopieren try { DocumentBuilderFactory factory = DocumentBuilderFactory.newInstance(); factory.setValidating(false); factory.setExpandEntityReferences(false); Document docConfig = factory.newDocumentBuilder().parse(configFile); NodeList list = docConfig.getElementsByTagName("configuration"); Element element = (Element) list.item(0); Document docLog = factory.newDocumentBuilder().parse(logFile); Node dup = docLog.importNode(element, true); docLog.getDocumentElement().appendChild(dup); FileWriter writer = new FileWriter(logFile); ByteArrayOutputStream baos = new ByteArrayOutputStream(); ElementToStream(docLog.getDocumentElement(), baos); String stringDoc2 = new String(baos.toByteArray()); writer.write(stringDoc2); writer.close(); // Der Header wird dabei leider verschossen, wieder zurck ndern String newstring = kostval.getTextResourceService().getText(MESSAGE_XML_HEADER); String oldstring = "<?xml version=\"1.0\" encoding=\"UTF-8\"?><KOSTValLog>"; Util.oldnewstring(oldstring, newstring, logFile); } catch (Exception e2) { LOGGER.logError("<Error>" + kostval.getTextResourceService() .getText(ERROR_XML_UNKNOWN, e2.getMessage())); System.out.println("Exception: " + e2.getMessage()); } // bestehendes Workverzeichnis ggf. lschen if (tmpDir.exists()) { Util.deleteDir(tmpDir); } System.exit(1); } } valDatei = tmpDirZip; File toplevelfolder = new File( valDatei.getAbsolutePath() + File.separator + valDatei.getName()); if (toplevelfolder.exists()) { valDatei = toplevelfolder; } unSipFile = valDatei; } } else { // SIP ist ein Ordner valDatei bleibt unverndert } // Vorgngige Formatvalidierung (Schritt 3c) Map<String, File> fileMap = Util.getFileMap(valDatei, false); Set<String> fileMapKeys = fileMap.keySet(); int pdf = 0; int tiff = 0; int siard = 0; int txt = 0; int csv = 0; int xml = 0; int xsd = 0; int wave = 0; int mp3 = 0; int jp2 = 0; int jpx = 0; int jpeg = 0; int png = 0; int dng = 0; int svg = 0; int mpeg2 = 0; int mp4 = 0; int xls = 0; int odt = 0; int ods = 0; int odp = 0; int other = 0; for (Iterator<String> iterator = fileMapKeys.iterator(); iterator.hasNext();) { String entryName = iterator.next(); File newFile = fileMap.get(entryName); if (!newFile.isDirectory() && newFile.getAbsolutePath().contains(File.separator + "content" + File.separator)) { valDatei = newFile; count = count + 1; // Ausgabe Dateizhler Ersichtlich das KOST-Val Dateien durchsucht System.out.print(count + " "); System.out.print("\r"); String extension = valDatei.getName(); int lastIndexOf = extension.lastIndexOf("."); if (lastIndexOf == -1) { // empty extension extension = "other"; } else { extension = extension.substring(lastIndexOf); } if (extension.equalsIgnoreCase(".pdf") || extension.equalsIgnoreCase(".pdfa")) { pdf = pdf + 1; } else if (extension.equalsIgnoreCase(".tiff") || extension.equalsIgnoreCase(".tif")) { tiff = tiff + 1; } else if (extension.equalsIgnoreCase(".siard")) { siard = siard + 1; } else if (extension.equalsIgnoreCase(".txt")) { txt = txt + 1; } else if (extension.equalsIgnoreCase(".csv")) { csv = csv + 1; } else if (extension.equalsIgnoreCase(".xml")) { xml = xml + 1; } else if (extension.equalsIgnoreCase(".xsd")) { xsd = xsd + 1; } else if (extension.equalsIgnoreCase(".wav")) { wave = wave + 1; } else if (extension.equalsIgnoreCase(".mp3")) { mp3 = mp3 + 1; } else if (extension.equalsIgnoreCase(".jp2")) { jp2 = jp2 + 1; } else if (extension.equalsIgnoreCase(".jpx") || extension.equalsIgnoreCase(".jpf")) { jpx = jpx + 1; } else if (extension.equalsIgnoreCase(".jpe") || extension.equalsIgnoreCase(".jpeg") || extension.equalsIgnoreCase(".jpg")) { jpeg = jpeg + 1; } else if (extension.equalsIgnoreCase(".png")) { png = png + 1; } else if (extension.equalsIgnoreCase(".dng")) { dng = dng + 1; } else if (extension.equalsIgnoreCase(".svg")) { svg = svg + 1; } else if (extension.equalsIgnoreCase(".mpeg") || extension.equalsIgnoreCase(".mpg")) { mpeg2 = mpeg2 + 1; } else if (extension.equalsIgnoreCase(".f4a") || extension.equalsIgnoreCase(".f4v") || extension.equalsIgnoreCase(".m4a") || extension.equalsIgnoreCase(".m4v") || extension.equalsIgnoreCase(".mp4")) { mp4 = mp4 + 1; } else if (extension.equalsIgnoreCase(".xls") || extension.equalsIgnoreCase(".xlw") || extension.equalsIgnoreCase(".xlsx")) { xls = xls + 1; } else if (extension.equalsIgnoreCase(".odt") || extension.equalsIgnoreCase(".ott")) { odt = odt + 1; } else if (extension.equalsIgnoreCase(".ods") || extension.equalsIgnoreCase(".ots")) { ods = ods + 1; } else if (extension.equalsIgnoreCase(".odp") || extension.equalsIgnoreCase(".otp")) { odp = odp + 1; } else { other = other + 1; } if (((valDatei.getAbsolutePath().toLowerCase().endsWith(".jp2"))) && jp2Validation.equals("yes")) { boolean valFile = valFile(valDatei, logFileName, directoryOfLogfile, verbose); if (valFile) { jp2CountIo = jp2CountIo + 1; } else { jp2CountNio = jp2CountNio + 1; } } else if (((valDatei.getAbsolutePath().toLowerCase().endsWith(".tiff") || valDatei.getAbsolutePath().toLowerCase().endsWith(".tif"))) && tiffValidation.equals("yes")) { boolean valFile = valFile(valDatei, logFileName, directoryOfLogfile, verbose); if (valFile) { tiffCountIo = tiffCountIo + 1; } else { tiffCountNio = tiffCountNio + 1; } } else if ((valDatei.getAbsolutePath().toLowerCase().endsWith(".siard")) && siardValidation.equals("yes")) { // Arbeitsverzeichnis zum Entpacken des Archivs erstellen String pathToWorkDirSiard = kostval.getConfigurationService().getPathToWorkDir(); File tmpDirSiard = new File(pathToWorkDirSiard + File.separator + "SIARD"); if (tmpDirSiard.exists()) { Util.deleteDir(tmpDirSiard); } if (!tmpDirSiard.exists()) { tmpDirSiard.mkdir(); } boolean valFile = valFile(valDatei, logFileName, directoryOfLogfile, verbose); if (valFile) { siardCountIo = siardCountIo + 1; } else { siardCountNio = siardCountNio + 1; } } else if (((valDatei.getAbsolutePath().toLowerCase().endsWith(".pdf") || valDatei.getAbsolutePath().toLowerCase().endsWith(".pdfa"))) && pdfaValidation.equals("yes")) { boolean valFile = valFile(valDatei, logFileName, directoryOfLogfile, verbose); if (valFile) { pdfaCountIo = pdfaCountIo + 1; } else { pdfaCountNio = pdfaCountNio + 1; } } else { countNio = countNio + 1; } } } countSummaryNio = pdfaCountNio + siardCountNio + tiffCountNio + jp2CountNio; countSummaryIo = pdfaCountIo + siardCountIo + tiffCountIo + jp2CountIo; int countSummaryIoP = 100 / count * countSummaryIo; int countSummaryNioP = 100 / count * countSummaryNio; int countNioP = 100 / count * countNio; String summary3c = kostval.getTextResourceService().getText(MESSAGE_XML_SUMMARY_3C, count, countSummaryIo, countSummaryNio, countNio, countSummaryIoP, countSummaryNioP, countNioP); if (countSummaryNio == 0) { // alle Validierten Dateien valide validFormat = true; fileName3c = "3c_Valide.txt"; } else { // Fehler in Validierten Dateien --> invalide validFormat = false; fileName3c = "3c_Invalide.txt"; } // outputFile3c = new File( directoryOfLogfile + fileName3c ); outputFile3c = new File(pathToWorkDir + File.separator + fileName3c); try { outputFile3c.createNewFile(); } catch (IOException e) { e.printStackTrace(); } if (countNio == count) { // keine Dateien Validiert LOGGER.logError(kostval.getTextResourceService().getText(ERROR_INCORRECTFILEENDINGS, formatValOn)); System.out .println(kostval.getTextResourceService().getText(ERROR_INCORRECTFILEENDINGS, formatValOn)); } LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_FORMAT2)); // Start Normale SIP-Validierung mit auswertung Format-Val. im 3c LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_SIP1)); valDatei = unSipFile; LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_VALERGEBNIS)); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_VALTYPE, kostval.getTextResourceService().getText(MESSAGE_SIPVALIDATION))); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_VALFILE, originalSipFile.getAbsolutePath())); System.out.println(kostval.getTextResourceService().getText(MESSAGE_SIPVALIDATION)); System.out.println(originalSipFile.getAbsolutePath()); Controllersip controller = (Controllersip) context.getBean("controllersip"); boolean okMandatory = false; okMandatory = controller.executeMandatory(valDatei, directoryOfLogfile); boolean ok = false; /* die Validierungen 1a - 1d sind obligatorisch, wenn sie bestanden wurden, knnen die * restlichen Validierungen, welche nicht zum Abbruch der Applikation fhren, ausgefhrt * werden. * * 1a wurde bereits getestet (vor der Formatvalidierung entsprechend fngt der Controller mit * 1b an */ if (okMandatory) { ok = controller.executeOptional(valDatei, directoryOfLogfile); } // Formatvalidierung validFormat ok = (ok && okMandatory && validFormat); if (ok) { // Validiertes SIP valide LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_VALERGEBNIS_VALID)); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_VALERGEBNIS_CLOSE)); System.out.println("Valid"); System.out.println(""); } else { // Fehler im Validierten SIP --> invalide LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_VALERGEBNIS_INVALID)); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_VALERGEBNIS_CLOSE)); System.out.println("Invalid"); System.out.println(""); } // ggf. Fehlermeldung 3c ergnzen Util.val3c(summary3c, logFile ); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_SIP2)); LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_LOGEND)); // Zeitstempel End java.util.Date nowEnd = new java.util.Date(); java.text.SimpleDateFormat sdfEnd = new java.text.SimpleDateFormat("dd.MM.yyyy HH:mm:ss"); String ausgabeEnd = sdfEnd.format(nowEnd); ausgabeEnd = "<End>" + ausgabeEnd + "</End>"; Util.valEnd(ausgabeEnd, logFile); Util.val3c(summary3c, logFile); Util.amp(logFile); // Die Konfiguration hereinkopieren try { DocumentBuilderFactory factory = DocumentBuilderFactory.newInstance(); factory.setValidating(false); factory.setExpandEntityReferences(false); Document docConfig = factory.newDocumentBuilder().parse(configFile); NodeList list = docConfig.getElementsByTagName("configuration"); Element element = (Element) list.item(0); Document docLog = factory.newDocumentBuilder().parse(logFile); Node dup = docLog.importNode(element, true); docLog.getDocumentElement().appendChild(dup); FileWriter writer = new FileWriter(logFile); ByteArrayOutputStream baos = new ByteArrayOutputStream(); ElementToStream(docLog.getDocumentElement(), baos); String stringDoc2 = new String(baos.toByteArray()); writer.write(stringDoc2); writer.close(); // Der Header wird dabei leider verschossen, wieder zurck ndern String newstring = kostval.getTextResourceService().getText(MESSAGE_XML_HEADER); String oldstring = "<?xml version=\"1.0\" encoding=\"UTF-8\"?><KOSTValLog>"; Util.oldnewstring(oldstring, newstring, logFile); } catch (Exception e) { LOGGER.logError( "<Error>" + kostval.getTextResourceService().getText(ERROR_XML_UNKNOWN, e.getMessage())); System.out.println("Exception: " + e.getMessage()); } // bestehendes Workverzeichnis ggf. lschen if (tmpDir.exists()) { Util.deleteDir(tmpDir); } StringBuffer command = new StringBuffer("rd " + tmpDir.getAbsolutePath() + " /s /q"); try { // KaD-Diagnose-Datei mit den neusten Anzahl Dateien pro KaD-Format Updaten DocumentBuilderFactory dbFactory = DocumentBuilderFactory.newInstance(); DocumentBuilder dBuilder = dbFactory.newDocumentBuilder(); Document doc = dBuilder.parse(xmlDiaCopy); doc.getDocumentElement().normalize(); NodeList nList = doc.getElementsByTagName("KOSTVal_FFCounter"); for (int temp = 0; temp < nList.getLength(); temp++) { Node nNode = nList.item(temp); if (nNode.getNodeType() == Node.ELEMENT_NODE) { Element eElement = (Element) nNode; if (pdf > 0) { String pdfNodeString = eElement.getElementsByTagName("pdf").item(0).getTextContent(); int pdfNodeValue = Integer.parseInt(pdfNodeString); pdf = pdf + pdfNodeValue; Util.kadDia("<pdf>" + pdfNodeValue + "</pdf>", "<pdf>" + pdf + "</pdf>", xmlDiaCopy); } if (tiff > 0) { String tiffNodeString = eElement.getElementsByTagName("tiff").item(0).getTextContent(); int tiffNodeValue = Integer.parseInt(tiffNodeString); tiff = tiff + tiffNodeValue; Util.kadDia("<tiff>" + tiffNodeValue + "</tiff>", "<tiff>" + tiff + "</tiff>", xmlDiaCopy); } if (siard > 0) { String siardNodeString = eElement.getElementsByTagName("siard").item(0) .getTextContent(); int siardNodeValue = Integer.parseInt(siardNodeString); siard = siard + siardNodeValue; Util.kadDia("<siard>" + siardNodeValue + "</siard>", "<siard>" + siard + "</siard>", xmlDiaCopy); } if (txt > 0) { String txtNodeString = eElement.getElementsByTagName("txt").item(0).getTextContent(); int txtNodeValue = Integer.parseInt(txtNodeString); txt = txt + txtNodeValue; Util.kadDia("<txt>" + txtNodeValue + "</txt>", "<txt>" + txt + "</txt>", xmlDiaCopy); } if (csv > 0) { String csvNodeString = eElement.getElementsByTagName("csv").item(0).getTextContent(); int csvNodeValue = Integer.parseInt(csvNodeString); csv = csv + csvNodeValue; Util.kadDia("<csv>" + csvNodeValue + "</csv>", "<csv>" + csv + "</csv>", xmlDiaCopy); } if (xml > 0) { String xmlNodeString = eElement.getElementsByTagName("xml").item(0).getTextContent(); int xmlNodeValue = Integer.parseInt(xmlNodeString); xml = xml + xmlNodeValue; Util.kadDia("<xml>" + xmlNodeValue + "</xml>", "<xml>" + xml + "</xml>", xmlDiaCopy); } if (xsd > 0) { String xsdNodeString = eElement.getElementsByTagName("xsd").item(0).getTextContent(); int xsdNodeValue = Integer.parseInt(xsdNodeString); xsd = xsd + xsdNodeValue; Util.kadDia("<xsd>" + xsdNodeValue + "</xsd>", "<xsd>" + xsd + "</xsd>", xmlDiaCopy); } if (wave > 0) { String waveNodeString = eElement.getElementsByTagName("wave").item(0).getTextContent(); int waveNodeValue = Integer.parseInt(waveNodeString); wave = wave + waveNodeValue; Util.kadDia("<wave>" + waveNodeValue + "</wave>", "<wave>" + wave + "</wave>", xmlDiaCopy); } if (mp3 > 0) { String mp3NodeString = eElement.getElementsByTagName("mp3").item(0).getTextContent(); int mp3NodeValue = Integer.parseInt(mp3NodeString); mp3 = mp3 + mp3NodeValue; Util.kadDia("<mp3>" + mp3NodeValue + "</mp3>", "<mp3>" + mp3 + "</mp3>", xmlDiaCopy); } if (jp2 > 0) { String jp2NodeString = eElement.getElementsByTagName("jp2").item(0).getTextContent(); int jp2NodeValue = Integer.parseInt(jp2NodeString); jp2 = jp2 + jp2NodeValue; Util.kadDia("<jp2>" + jp2NodeValue + "</jp2>", "<jp2>" + jp2 + "</jp2>", xmlDiaCopy); } if (jpx > 0) { String jpxNodeString = eElement.getElementsByTagName("jpx").item(0).getTextContent(); int jpxNodeValue = Integer.parseInt(jpxNodeString); jpx = jpx + jpxNodeValue; Util.kadDia("<jpx>" + jpxNodeValue + "</jpx>", "<jpx>" + jpx + "</jpx>", xmlDiaCopy); } if (jpeg > 0) { String jpegNodeString = eElement.getElementsByTagName("jpeg").item(0).getTextContent(); int jpegNodeValue = Integer.parseInt(jpegNodeString); jpeg = jpeg + jpegNodeValue; Util.kadDia("<jpeg>" + jpegNodeValue + "</jpeg>", "<jpeg>" + jpeg + "</jpeg>", xmlDiaCopy); } if (png > 0) { String pngNodeString = eElement.getElementsByTagName("png").item(0).getTextContent(); int pngNodeValue = Integer.parseInt(pngNodeString); png = png + pngNodeValue; Util.kadDia("<png>" + pngNodeValue + "</png>", "<png>" + png + "</png>", xmlDiaCopy); } if (dng > 0) { String dngNodeString = eElement.getElementsByTagName("dng").item(0).getTextContent(); int dngNodeValue = Integer.parseInt(dngNodeString); dng = dng + dngNodeValue; Util.kadDia("<dng>" + dngNodeValue + "</dng>", "<dng>" + dng + "</dng>", xmlDiaCopy); } if (svg > 0) { String svgNodeString = eElement.getElementsByTagName("svg").item(0).getTextContent(); int svgNodeValue = Integer.parseInt(svgNodeString); svg = svg + svgNodeValue; Util.kadDia("<svg>" + svgNodeValue + "</svg>", "<svg>" + svg + "</svg>", xmlDiaCopy); } if (mpeg2 > 0) { String mpeg2NodeString = eElement.getElementsByTagName("mpeg2").item(0) .getTextContent(); int mpeg2NodeValue = Integer.parseInt(mpeg2NodeString); mpeg2 = mpeg2 + mpeg2NodeValue; Util.kadDia("<mpeg2>" + mpeg2NodeValue + "</mpeg2>", "<mpeg2>" + mpeg2 + "</mpeg2>", xmlDiaCopy); } if (mp4 > 0) { String mp4NodeString = eElement.getElementsByTagName("mp4").item(0).getTextContent(); int mp4NodeValue = Integer.parseInt(mp4NodeString); mp4 = mp4 + mp4NodeValue; Util.kadDia("<mp4>" + mp4NodeValue + "</mp4>", "<mp4>" + mp4 + "</mp4>", xmlDiaCopy); } if (xls > 0) { String xlsNodeString = eElement.getElementsByTagName("xls").item(0).getTextContent(); int xlsNodeValue = Integer.parseInt(xlsNodeString); xls = xls + xlsNodeValue; Util.kadDia("<xls>" + xlsNodeValue + "</xls>", "<xls>" + xls + "</xls>", xmlDiaCopy); } if (odt > 0) { String odtNodeString = eElement.getElementsByTagName("odt").item(0).getTextContent(); int odtNodeValue = Integer.parseInt(odtNodeString); odt = odt + odtNodeValue; Util.kadDia("<odt>" + odtNodeValue + "</odt>", "<odt>" + odt + "</odt>", xmlDiaCopy); } if (ods > 0) { String odsNodeString = eElement.getElementsByTagName("ods").item(0).getTextContent(); int odsNodeValue = Integer.parseInt(odsNodeString); ods = ods + odsNodeValue; Util.kadDia("<ods>" + odsNodeValue + "</ods>", "<ods>" + ods + "</ods>", xmlDiaCopy); } if (odp > 0) { String odpNodeString = eElement.getElementsByTagName("odp").item(0).getTextContent(); int odpNodeValue = Integer.parseInt(odpNodeString); odp = odp + odpNodeValue; Util.kadDia("<odp>" + odpNodeValue + "</odp>", "<odp>" + odp + "</odp>", xmlDiaCopy); } if (other > 0) { String otherNodeString = eElement.getElementsByTagName("other").item(0) .getTextContent(); int otherNodeValue = Integer.parseInt(otherNodeString); other = other + otherNodeValue; Util.kadDia("<other>" + otherNodeValue + "</other>", "<other>" + other + "</other>", xmlDiaCopy); } } } } catch (Exception e) { e.printStackTrace(); } if (ok) { // bestehendes Workverzeichnis ggf. lschen if (tmpDir.exists()) { Util.deleteDir(tmpDir); } if (tmpDir.exists()) { Runtime rt = Runtime.getRuntime(); Process proc = rt.exec(command.toString()); } System.exit(0); } else { // bestehendes Workverzeichnis ggf. lschen if (tmpDir.exists()) { Util.deleteDir(tmpDir); } if (tmpDir.exists()) { Runtime rt = Runtime.getRuntime(); Process proc = rt.exec(command.toString()); } System.exit(2); } LOGGER.logError(kostval.getTextResourceService().getText(MESSAGE_XML_SIP2)); } else { /* Ueberprfung des Parameters (Val-Typ): format / sip args[0] ist nicht "--format" oder * "--sip" --> INVALIDE */ LOGGER.logError(kostval.getTextResourceService().getText(ERROR_IOE, kostval.getTextResourceService().getText(ERROR_PARAMETER_USAGE))); System.out.println(kostval.getTextResourceService().getText(ERROR_PARAMETER_USAGE)); if (tmpDir.exists()) { Util.deleteDir(tmpDir); tmpDir.deleteOnExit(); } System.exit(1); } }
From source file:com.mgreau.jboss.as7.cli.CliLauncher.java
public static void main(String[] args) throws Exception { int exitCode = 0; CommandContext cmdCtx = null;/*from w w w. j a v a 2 s. co m*/ boolean gui = false; String appName = ""; try { String argError = null; List<String> commands = null; File file = null; boolean connect = false; String defaultControllerProtocol = "http-remoting"; String defaultControllerHost = null; int defaultControllerPort = -1; boolean version = false; String username = null; char[] password = null; int connectionTimeout = -1; //App deployment boolean isAppDeployment = false; final Properties props = new Properties(); for (String arg : args) { if (arg.startsWith("--controller=") || arg.startsWith("controller=")) { final String fullValue; final String value; if (arg.startsWith("--")) { fullValue = arg.substring(13); } else { fullValue = arg.substring(11); } final int protocolEnd = fullValue.lastIndexOf("://"); if (protocolEnd == -1) { value = fullValue; } else { value = fullValue.substring(protocolEnd + 3); defaultControllerProtocol = fullValue.substring(0, protocolEnd); } String portStr = null; int colonIndex = value.lastIndexOf(':'); if (colonIndex < 0) { // default port defaultControllerHost = value; } else if (colonIndex == 0) { // default host portStr = value.substring(1); } else { final boolean hasPort; int closeBracket = value.lastIndexOf(']'); if (closeBracket != -1) { //possible ip v6 if (closeBracket > colonIndex) { hasPort = false; } else { hasPort = true; } } else { //probably ip v4 hasPort = true; } if (hasPort) { defaultControllerHost = value.substring(0, colonIndex).trim(); portStr = value.substring(colonIndex + 1).trim(); } else { defaultControllerHost = value; } } if (portStr != null) { int port = -1; try { port = Integer.parseInt(portStr); if (port < 0) { argError = "The port must be a valid non-negative integer: '" + args + "'"; } else { defaultControllerPort = port; } } catch (NumberFormatException e) { argError = "The port must be a valid non-negative integer: '" + arg + "'"; } } } else if ("--connect".equals(arg) || "-c".equals(arg)) { connect = true; } else if ("--version".equals(arg)) { version = true; } else if ("--gui".equals(arg)) { gui = true; } else if (arg.startsWith("--appDeployment=") || arg.startsWith("appDeployment=")) { isAppDeployment = true; appName = arg.startsWith("--") ? arg.substring(16) : arg.substring(14); } else if (arg.startsWith("--file=") || arg.startsWith("file=")) { if (file != null) { argError = "Duplicate argument '--file'."; break; } if (commands != null) { argError = "Only one of '--file', '--commands' or '--command' can appear as the argument at a time."; break; } final String fileName = arg.startsWith("--") ? arg.substring(7) : arg.substring(5); if (!fileName.isEmpty()) { file = new File(fileName); if (!file.exists()) { argError = "File " + file.getAbsolutePath() + " doesn't exist."; break; } } else { argError = "Argument '--file' is missing value."; break; } } else if (arg.startsWith("--commands=") || arg.startsWith("commands=")) { if (file != null) { argError = "Only one of '--file', '--commands' or '--command' can appear as the argument at a time."; break; } if (commands != null) { argError = "Duplicate argument '--command'/'--commands'."; break; } final String value = arg.startsWith("--") ? arg.substring(11) : arg.substring(9); commands = Util.splitCommands(value); } else if (arg.startsWith("--command=") || arg.startsWith("command=")) { if (file != null) { argError = "Only one of '--file', '--commands' or '--command' can appear as the argument at a time."; break; } if (commands != null) { argError = "Duplicate argument '--command'/'--commands'."; break; } final String value = arg.startsWith("--") ? arg.substring(10) : arg.substring(8); commands = Collections.singletonList(value); } else if (arg.startsWith("--user=")) { username = arg.startsWith("--") ? arg.substring(7) : arg.substring(5); } else if (arg.startsWith("--password=")) { password = (arg.startsWith("--") ? arg.substring(11) : arg.substring(9)).toCharArray(); } else if (arg.startsWith("--timeout=")) { if (connectionTimeout > 0) { argError = "Duplicate argument '--timeout'"; break; } final String value = arg.substring(10); try { connectionTimeout = Integer.parseInt(value); } catch (final NumberFormatException e) { // } if (connectionTimeout <= 0) { argError = "The timeout must be a valid positive integer: '" + value + "'"; } } else if (arg.equals("--help") || arg.equals("-h")) { commands = Collections.singletonList("help"); } else if (arg.startsWith("--properties=")) { final String value = arg.substring(13); final File propertiesFile = new File(value); if (!propertiesFile.exists()) { argError = "File doesn't exist: " + propertiesFile.getAbsolutePath(); break; } FileInputStream fis = null; try { fis = new FileInputStream(propertiesFile); props.load(fis); } catch (FileNotFoundException e) { argError = e.getLocalizedMessage(); break; } catch (java.io.IOException e) { argError = "Failed to load properties from " + propertiesFile.getAbsolutePath() + ": " + e.getLocalizedMessage(); break; } finally { if (fis != null) { try { fis.close(); } catch (java.io.IOException e) { } } } for (final Object prop : props.keySet()) { AccessController.doPrivileged(new PrivilegedAction<Object>() { public Object run() { System.setProperty((String) prop, (String) props.get(prop)); return null; } }); } } else if (!(arg.startsWith("-D") || arg.equals("-XX:"))) {// skip system properties and jvm options // assume it's commands if (file != null) { argError = "Only one of '--file', '--commands' or '--command' can appear as the argument at a time: " + arg; break; } if (commands != null) { argError = "Duplicate argument '--command'/'--commands'."; break; } commands = Util.splitCommands(arg); } } if (argError != null) { System.err.println(argError); exitCode = 1; return; } if (version) { cmdCtx = initCommandContext(defaultControllerProtocol, defaultControllerHost, defaultControllerPort, username, password, false, connect, connectionTimeout); VersionHandler.INSTANCE.handle(cmdCtx); return; } if (file != null) { cmdCtx = initCommandContext(defaultControllerProtocol, defaultControllerHost, defaultControllerPort, username, password, false, connect, connectionTimeout); processFile(file, cmdCtx, isAppDeployment, appName, props); return; } if (commands != null) { cmdCtx = initCommandContext(defaultControllerProtocol, defaultControllerHost, defaultControllerPort, username, password, false, connect, connectionTimeout); processCommands(commands, cmdCtx); return; } // Interactive mode cmdCtx = initCommandContext(defaultControllerProtocol, defaultControllerHost, defaultControllerPort, username, password, true, connect, connectionTimeout); cmdCtx.interact(); } catch (Throwable t) { t.printStackTrace(); exitCode = 1; } finally { if (cmdCtx != null && cmdCtx.getExitCode() != 0) { exitCode = cmdCtx.getExitCode(); } if (!gui) { System.exit(exitCode); } } System.exit(exitCode); }
From source file:com.peterbochs.PeterBochsDebugger.java
public static void main(String[] args) { WebServiceUtil.log("peter-bochs", "start", null, null, null); try {//ww w. j av a2 s . co m UIManager.setLookAndFeel("com.peterswing.white.PeterSwingWhiteLookAndFeel"); } catch (Exception e) { e.printStackTrace(); } if (args.length == 0) { String errorMessage = "Wrong number of argument\n\n"; errorMessage += "\nIn Linux/Mac : java -jar peter-bochs-debugger.jar bochs -f bochsrc.bxrc"; errorMessage += "\nIn windows : java -jar peter-bochs-debugger.jar c:\\program files\\bochs2.4.3\\bochsdbg.exe -q -f bochsrc.bxrc"; errorMessage += "\n!!! if using peter-bochs in windows, you need to pass the full path of bochs exe and -q to the parameter. (!!! relative path of bochs exe will not work)"; errorMessage += "\n!!! to use \"experimental feature\", please add \"-debug\" to the parameter list"; System.out.println(errorMessage); JOptionPane.showMessageDialog(null, errorMessage); System.exit(1); } else { if (args[0].equals("-version") || args[0].equals("-v")) { System.out.println(Global.version); System.exit(1); } } for (String str : args) { if (str.contains("bochsrc") || str.contains(".bxrc")) { bochsrc = str; } } String osName = System.getProperty("os.name").toLowerCase(); if (osName.toLowerCase().contains("windows")) { os = OSType.win; } else if (osName.toLowerCase().contains("mac")) { os = OSType.mac; } else { os = OSType.linux; } if (os == OSType.mac) { com.apple.eawt.Application macApp = com.apple.eawt.Application.getApplication(); // System.setProperty("dock:name", "Your Application Name"); macApp.setDockIconImage(new ImageIcon( PeterBochsDebugger.class.getClassLoader().getResource("com/peterbochs/icons/peter.png")) .getImage()); // java.awt.PopupMenu menu = new java.awt.PopupMenu(); // menu.add(new MenuItem("test")); // macApp.setDockMenu(menu); macApp.addApplicationListener(new MacAboutBoxHandler()); } if (ArrayUtils.contains(args, "-debug")) { Global.debug = true; args = (String[]) ArrayUtils.removeElement(args, "-debug"); } else { Global.debug = false; } try { if (PeterBochsDebugger.class.getProtectionDomain().getCodeSource().getLocation().getFile() .endsWith(".jar")) { JarFile jarFile = new JarFile( PeterBochsDebugger.class.getProtectionDomain().getCodeSource().getLocation().getFile()); if (System.getProperty("os.name").toLowerCase().contains("linux")) { if (System.getProperty("os.arch").contains("64")) { if (Global.debug) { System.out.println("Loading linux 64 bits jogl"); } CommonLib.writeFile( jarFile.getInputStream( new JarEntry("com/peterbochs/jogl_dll/linux_amd64/libgluegen-rt.so")), new File("libgluegen-rt.so")); CommonLib.writeFile( jarFile.getInputStream( new JarEntry("com/peterbochs/jogl_dll/linux_amd64/libjogl_awt.so")), new File("libjogl_awt.so")); CommonLib.writeFile( jarFile.getInputStream( new JarEntry("com/peterbochs/jogl_dll/linux_amd64/libjogl_cg.so")), new File("libjogl_cg.so")); CommonLib.writeFile( jarFile.getInputStream( new JarEntry("com/peterbochs/jogl_dll/linux_amd64/libjogl.so")), new File("libjogl.so")); } else { if (Global.debug) { System.out.println("Loading linux 32 bits jogl"); } CommonLib.writeFile( jarFile.getInputStream( new JarEntry("com/peterbochs/jogl_dll/linux_i586/libgluegen-rt.so")), new File("libgluegen-rt.so")); CommonLib.writeFile( jarFile.getInputStream( new JarEntry("com/peterbochs/jogl_dll/linux_i586/libjogl_awt.so")), new File("libjogl_awt.so")); CommonLib.writeFile( jarFile.getInputStream( new JarEntry("com/peterbochs/jogl_dll/linux_i586/libjogl_cg.so")), new File("libjogl_cg.so")); CommonLib.writeFile( jarFile.getInputStream( new JarEntry("com/peterbochs/jogl_dll/linux_i586/libjogl.so")), new File("libjogl.so")); } try { File f = new File("."); Runtime.getRuntime().load(f.getAbsolutePath() + File.separator + "libjogl.so"); System.out.println("Loading " + f.getAbsolutePath() + File.separator + "libjogl.so"); Runtime.getRuntime().load(f.getAbsolutePath() + File.separator + "libjogl_awt.so"); Runtime.getRuntime().load(f.getAbsolutePath() + File.separator + "libjogl_cg.so"); Runtime.getRuntime().load(f.getAbsolutePath() + File.separator + "libgluegen-rt.so"); } catch (UnsatisfiedLinkError e) { e.printStackTrace(); System.err.println("Native code library failed to load.\n" + e); System.err.println( "Solution : Please add \"-Djava.library.path=.\" to start peter-bochs\n" + e); } } else if (System.getProperty("os.name").toLowerCase().contains("windows")) { CommonLib.writeFile(jarFile.getInputStream(new JarEntry("com/peterbochs/exe/PauseBochs.exe")), new File("PauseBochs.exe")); CommonLib.writeFile(jarFile.getInputStream(new JarEntry("com/peterbochs/exe/StopBochs.exe")), new File("StopBochs.exe")); CommonLib.writeFile(jarFile.getInputStream(new JarEntry("com/peterbochs/exe/ndisasm.exe")), new File("ndisasm.exe")); if (System.getProperty("os.arch").contains("64")) { if (Global.debug) { System.out.println("Loading windows 64 bits jogl"); } CommonLib.writeFile( jarFile.getInputStream( new JarEntry("com/peterbochs/jogl_dll/windows_amd64/jogl.dll")), new File("jogl.dll")); CommonLib.writeFile( jarFile.getInputStream( new JarEntry("com/peterbochs/jogl_dll/windows_amd64/jogl_awt.dll")), new File("jogl_awt.dll")); CommonLib.writeFile( jarFile.getInputStream( new JarEntry("com/peterbochs/jogl_dll/windows_amd64/jogl_cg.dll")), new File("jogl_cg.dll")); CommonLib.writeFile( jarFile.getInputStream( new JarEntry("com/peterbochs/jogl_dll/windows_amd64/gluegen-rt.dll")), new File("gluegen-rt.dll")); } else { if (Global.debug) { System.out.println("Loading windows 32 bits jogl"); } CommonLib.writeFile( jarFile.getInputStream( new JarEntry("com/peterbochs/jogl_dll/windows_i586/jogl.dll")), new File("jogl.dll")); CommonLib.writeFile( jarFile.getInputStream( new JarEntry("com/peterbochs/jogl_dll/windows_i586/jogl_awt.dll")), new File("jogl_awt.dll")); CommonLib.writeFile( jarFile.getInputStream( new JarEntry("com/peterbochs/jogl_dll/windows_i586/jogl_cg.dll")), new File("jogl_cg.dll")); CommonLib.writeFile( jarFile.getInputStream( new JarEntry("com/peterbochs/jogl_dll/windows_i586/gluegen-rt.dll")), new File("gluegen-rt.dll")); } try { File f = new File("."); System.load(f.getAbsolutePath() + File.separator + "jogl.dll"); System.load(f.getAbsolutePath() + File.separator + "jogl_awt.dll"); System.load(f.getAbsolutePath() + File.separator + "jogl_cg.dll"); System.load(f.getAbsolutePath() + File.separator + "gluegen-rt.dll"); } catch (UnsatisfiedLinkError e) { e.printStackTrace(); System.err.println("Native code library failed to load.\n" + e); System.err.println( "Solution : Please add \"-Djava.library.path=.\" to start peter-bochs\n" + e); } } } } catch (IOException e) { e.printStackTrace(); } if (ArrayUtils.contains(args, "-loadBreakpoint")) { Setting.getInstance().setLoadBreakpointAtStartup(true); args = (String[]) ArrayUtils.removeElement(args, "-loadBreakpoint"); } else if (ArrayUtils.contains(args, "-loadbreakpoint")) { Setting.getInstance().setLoadBreakpointAtStartup(true); args = (String[]) ArrayUtils.removeElement(args, "-loadbreakpoint"); } for (int x = 0; x < args.length; x++) { if (args[x].toLowerCase().startsWith("-osdebug")) { Global.osDebug = CommonLib.string2long(args[x].replaceAll("-.*=", "")); args = (String[]) ArrayUtils.removeElement(args, args[x]); x = -1; } else if (args[x].toLowerCase().startsWith("-profilingmemoryport")) { Global.profilingMemoryPort = (int) CommonLib.string2long(args[x].replaceAll("-.*=", "")); args = (String[]) ArrayUtils.removeElement(args, args[x]); x = -1; } else if (args[x].toLowerCase().startsWith("-profilingjmpport")) { Global.profilingJmpPort = (int) CommonLib.string2long(args[x].replaceAll("-.*=", "")); args = (String[]) ArrayUtils.removeElement(args, args[x]); x = -1; } else if (args[x].toLowerCase().startsWith("-loadelf")) { Global.elfPaths = args[x].replaceAll("-loadelf=", "").split(","); Setting.getInstance().setLoadSystemMapAtStartup(true); args = (String[]) ArrayUtils.removeElement(args, args[x]); x = -1; } else if (args[x].toLowerCase().startsWith("-loadmap")) { System.out.println("-loadmap is not deprecated, please use -loadelf."); } } arguments = args; SwingUtilities.invokeLater(new Runnable() { public void run() { PeterBochsDebugger inst = new PeterBochsDebugger(); PeterBochsDebugger.instance = inst; new Thread("preventSetVisibleHang thread") { public void run() { try { Thread.sleep(10000); if (preventSetVisibleHang) { System.out.println( "setVisible(true) cause system hang, this probably a swing bug, so force exit, please restart"); System.exit(-1); } } catch (InterruptedException e) { e.printStackTrace(); } } }.start(); if (Global.debug) { System.out.println("setVisible(true)"); } inst.setVisible(true); preventSetVisibleHang = false; if (Global.debug) { System.out.println("end setVisible(true)"); } } }); }