Example usage for java.io DataOutput writeInt

List of usage examples for java.io DataOutput writeInt

Introduction

In this page you can find the example usage for java.io DataOutput writeInt.

Prototype

void writeInt(int v) throws IOException;

Source Link

Document

Writes an int value, which is comprised of four bytes, to the output stream.

Usage

From source file:com.fiorano.openesb.application.aps.ApplicationHeader.java

/**
 *  This method writes this <code>ApplicationHeader</code> object to the
 *  specified output stream object./*from   w ww .  j a v a 2s. c o m*/
 *
 * @param out DataOutput object
 * @param versionNo
 * @exception IOException if an error occurs while converting data and
 * writing it to a binary stream.
 * @see #fromStream(DataInput, int)
 * @since Tifosi2.0
 */
public void toStream(DataOutput out, int versionNo) throws IOException {
    super.toStream(out, versionNo);

    out.writeBoolean(m_canBeSubGraphed);

    if (m_scope != null)
        UTFReaderWriter.writeUTF(out, m_scope);
    else
        UTFReaderWriter.writeUTF(out, "");

    if (m_appName != null)
        UTFReaderWriter.writeUTF(out, m_appName);
    else
        UTFReaderWriter.writeUTF(out, "");

    if (m_appGUID != null)
        UTFReaderWriter.writeUTF(out, m_appGUID);
    else
        UTFReaderWriter.writeUTF(out, "");

    if (m_creationDate != null)
        UTFReaderWriter.writeUTF(out, m_creationDate);
    else
        UTFReaderWriter.writeUTF(out, "");

    if (m_category != null)
        UTFReaderWriter.writeUTF(out, m_category);
    else
        UTFReaderWriter.writeUTF(out, "");

    if (m_authorNames != null) {
        int length = m_authorNames.size();

        out.writeInt(length);

        Enumeration names = m_authorNames.elements();

        while (names.hasMoreElements()) {
            String name = (String) names.nextElement();

            UTFReaderWriter.writeUTF(out, name);
        }
    } else
        out.writeInt(0);

    if (m_iconName != null)
        UTFReaderWriter.writeUTF(out, m_iconName);
    else
        UTFReaderWriter.writeUTF(out, "");

    if (m_shortDescription != null)
        UTFReaderWriter.writeUTF(out, m_shortDescription);
    else
        UTFReaderWriter.writeUTF(out, "");

    if (m_longDescription != null)
        UTFReaderWriter.writeUTF(out, m_longDescription);
    else
        UTFReaderWriter.writeUTF(out, "");

    if (m_compatibleWith != null) {
        int length = m_compatibleWith.size();

        out.writeInt(length);

        Enumeration names = m_compatibleWith.elements();

        while (names.hasMoreElements()) {
            String name = (String) names.nextElement();

            UTFReaderWriter.writeUTF(out, name);
        }
    } else
        out.writeInt(0);

    out.writeInt(m_maxInstLimit);

    if (m_params != null) {
        int length = m_params.size();

        out.writeInt(length);

        Enumeration params = m_params.elements();

        while (params.hasMoreElements()) {
            Param param = (Param) params.nextElement();

            param.toStream(out, versionNo);
        }
    } else
        out.writeInt(0);

    if (m_version != null)
        UTFReaderWriter.writeUTF(out, m_version);
    else
        UTFReaderWriter.writeUTF(out, "");

    out.writeBoolean(m_isVersionLocked);

    UTFReaderWriter.writeUTF(out, m_strProfile);

    if (m_appContext != null) {
        out.writeInt(1);
        m_appContext.toStream(out, versionNo);
    } else {
        out.writeInt(0);
    }
}

From source file:org.mhisoft.wallet.service.AttachmentService.java

/**
 * @param transferStoreMode a new store will be created because the old one has t
 * @param oldStoreFileName  provide along with the transferStoreMode. for read the contents to be transfered to the new store  when doing compacting.
 * @param itemStartPos      start position for the data output file.
 * @param dataOut           data output file/stream
 * @param t                 the  FileAccessTable contains the entries to write.
 * @param encryptor         The encryptor
 * @throws IOException/*from  ww w.  j a  v  a 2  s . c o  m*/
 */
protected void writeFileEntries(WalletModel model, boolean transferStoreMode, String oldStoreFileName,
        final long itemStartPos, DataOutput dataOut, final FileAccessTable t,
        final PBEEncryptor oldEncryptorForRead, final PBEEncryptor encryptor) throws IOException {

    long pos = itemStartPos;

    //write it out
    //dataOut = new DataOutputStream(new FileOutputStream(new File(outoutFIleName)));

    //write the total number of entries first
    /*#0*/
    //dataOut.writeInt(t.getEntries().size());
    //itemStartPos = 4;
    String impAttachmentStoreName = null;
    if (model.getImpModel() != null)
        impAttachmentStoreName = getAttachmentFileName(model.getImpModel().getVaultFileName());

    //write each entry
    for (int i = 0; i < t.getEntries().size(); i++) {

        FileAccessEntry fileAccessEntry = t.getEntries().get(i);

        //not handleing the deleted entries.
        if (fileAccessEntry.getAccessFlag() == FileAccessFlag.Delete) {
            continue;
        }

        logger.fine("------------------");
        logger.fine("Write entry: " + fileAccessEntry.getGUID() + "-" + fileAccessEntry.getFileName());
        logger.fine("\t access flag: " + fileAccessEntry.getAccessFlag());
        logger.fine("\t start pos: " + pos);

        fileAccessEntry.setPosition(pos);

        /*  UUID*/
        int uuidSize = FileUtils.writeString(dataOut, fileAccessEntry.getGUID());
        pos += 40;

        /*  accessflag */
        dataOut.writeInt(0);
        pos += 4;

        /* position */
        dataOut.writeLong(fileAccessEntry.getPosition());
        pos += 8;

        /* write filename encrypted */
        String strFName = FileUtils.getFileNameWithoutPath(fileAccessEntry.getFileName());
        logger.fine("\t write file name: " + strFName);
        byte[] _byteFileName = StringUtils.getBytes(strFName);
        pos = writeEncryptedContent(_byteFileName, encryptor, dataOut, pos);
        logger.fine("\t pos: " + pos);

        /* Attachment body */
        byte[] attachmentBytes;

        if (fileAccessEntry.getAccessFlag() == FileAccessFlag.Merge && fileAccessEntry.getEncSize() > 0) {
            if (impAttachmentStoreName == null)
                throw new IOException("impAttachmentStoreName is not set.");
            //depends on the import model version, it might or might not be compressed
            //test case: import an old version data file with attachments.
            byte[] _impBytes = readCompressedFileContent(model.getImpModel().getCurrentDataFileVersion(),
                    impAttachmentStoreName, fileAccessEntry, model.getImpModel().getEncryptor());
            if (model.getImpModel().getCurrentDataFileVersion() >= WalletModel.LATEST_DATA_VERSION) {
                //it is compressed.
                attachmentBytes = _impBytes;
            } else {
                //not compressed, need to compress it.
                attachmentBytes = CompressionUtil.getCompressedBytes(new ByteArrayInputStream(_impBytes));
            }

        } else if (transferStoreMode && fileAccessEntry.getAccessFlag() == FileAccessFlag.None
                && fileAccessEntry.getEncSize() > 0) {
            // no change, this is an transfer to the new store. need to read the filecontent from the old store.
            // could be upgrade scenario as well.
            // should be able to skip the compression-decompression process.
            byte[] _bytes = readCompressedFileContent(model.getCurrentDataFileVersion(), oldStoreFileName,
                    fileAccessEntry, oldEncryptorForRead);

            if (model.getCurrentDataFileVersion() < WalletModel.LATEST_DATA_VERSION) {
                //it was not compressed.
                attachmentBytes = CompressionUtil.getCompressedBytes(new ByteArrayInputStream(_bytes));
                logger.fine("\t transfer from old store. compress contennt. before " + _bytes.length
                        + ", after:" + attachmentBytes.length);
            } else
                attachmentBytes = _bytes;

        } else {
            /* for CREATE OR UPDATE or a new store */
            //read from file
            //since v14 , start to compress the contents.
            File f = fileAccessEntry.getFile();
            FileInputStream sourceInputStream = new FileInputStream(f);
            if (model.getCurrentDataFileVersion() < WalletModel.LATEST_DATA_VERSION) {
                //for testing, write the old version format. un-compressed
                attachmentBytes = FileUtils.readFile(sourceInputStream);
                logger.fine("\t write entry by reading from file, not compressed: " + fileAccessEntry.getFile()
                        + ", original size:" + fileAccessEntry.getFile().length());
            } else {
                attachmentBytes = CompressionUtil.getCompressedBytes(sourceInputStream);
                logger.fine("\t write entry by reading from file: " + fileAccessEntry.getFile()
                        + ", original size:" + fileAccessEntry.getFile().length() + ", compressed size:"
                        + attachmentBytes.length);
            }
        }

        //encrypted the compressed bytes and write out.
        pos = writeEncryptedContent(attachmentBytes, encryptor, dataOut, pos);

    }

}

From source file:com.ricemap.spateDB.core.RTree.java

/**
 * Builds the RTree given a serialized list of elements. It uses the given
 * stockObject to deserialize these elements and build the tree. Also writes
 * the created tree to the disk directly.
 * // ww w . j  a v  a  2s.c om
 * @param elements
 *            - serialization of elements to be written
 * @param offset
 *            - index of the first element to use in the elements array
 * @param len
 *            - number of bytes to user from the elements array
 * @param bytesAvailable
 *            - size available (in bytes) to store the tree structures
 * @param dataOut
 *            - an output to use for writing the tree to
 * @param fast_sort
 *            - setting this to <code>true</code> allows the method to run
 *            faster by materializing the offset of each element in the list
 *            which speeds up the comparison. However, this requires an
 *            additional 16 bytes per element. So, for each 1M elements, the
 *            method will require an additional 16 M bytes (approximately).
 */
public void bulkLoadWrite(final byte[] element_bytes, final int offset, final int len, final int degree,
        DataOutput dataOut, final boolean fast_sort, final boolean columnarStorage) {
    try {
        columnar = columnarStorage;
        //TODO: the order of fields should be stable under Oracle JVM, but not guaranteed
        Field[] fields = stockObject.getClass().getDeclaredFields();

        // Count number of elements in the given text
        int i_start = offset;
        final Text line = new Text();
        while (i_start < offset + len) {
            int i_end = skipToEOL(element_bytes, i_start);
            // Extract the line without end of line character
            line.set(element_bytes, i_start, i_end - i_start - 1);
            stockObject.fromText(line);

            elementCount++;
            i_start = i_end;
        }
        LOG.info("Bulk loading an RTree with " + elementCount + " elements");

        // It turns out the findBestDegree returns the best degree when the
        // whole
        // tree is loaded to memory when processed. However, as current
        // algorithms
        // process the tree while it's on disk, a higher degree should be
        // selected
        // such that a node fits one file block (assumed to be 4K).
        // final int degree = findBestDegree(bytesAvailable, elementCount);
        LOG.info("Writing an RTree with degree " + degree);

        int height = Math.max(1, (int) Math.ceil(Math.log(elementCount) / Math.log(degree)));
        int leafNodeCount = (int) Math.pow(degree, height - 1);
        if (elementCount < 2 * leafNodeCount && height > 1) {
            height--;
            leafNodeCount = (int) Math.pow(degree, height - 1);
        }
        int nodeCount = (int) ((Math.pow(degree, height) - 1) / (degree - 1));
        int nonLeafNodeCount = nodeCount - leafNodeCount;

        // Keep track of the offset of each element in the text
        final int[] offsets = new int[elementCount];
        final int[] ids = new int[elementCount];
        final double[] ts = fast_sort ? new double[elementCount] : null;
        final double[] xs = fast_sort ? new double[elementCount] : null;
        final double[] ys = fast_sort ? new double[elementCount] : null;

        //initialize columnar data output
        ByteArrayOutputStream index_bos = new ByteArrayOutputStream();
        DataOutputStream index_dos = new DataOutputStream(index_bos);
        ByteArrayOutputStream[] bos = new ByteArrayOutputStream[fields.length];
        DataOutputStream[] dos = new DataOutputStream[fields.length];
        for (int i = 0; i < bos.length; i++) {
            bos[i] = new ByteArrayOutputStream();
            dos[i] = new DataOutputStream(bos[i]);
        }

        i_start = offset;
        line.clear();
        for (int i = 0; i < elementCount; i++) {
            offsets[i] = i_start;
            ids[i] = i;
            int i_end = skipToEOL(element_bytes, i_start);
            if (xs != null) {
                // Extract the line with end of line character
                line.set(element_bytes, i_start, i_end - i_start - 1);
                stockObject.fromText(line);
                // Sample center of the shape
                ts[i] = (stockObject.getMBR().t1 + stockObject.getMBR().t2) / 2;
                xs[i] = (stockObject.getMBR().x1 + stockObject.getMBR().x2) / 2;
                ys[i] = (stockObject.getMBR().y1 + stockObject.getMBR().y2) / 2;

                //build columnar storage
                if (stockObject instanceof Point3d) {
                    index_dos.writeDouble(ts[i]);
                    index_dos.writeDouble(xs[i]);
                    index_dos.writeDouble(ys[i]);
                } else {
                    throw new RuntimeException("Indexing non-point shape with RTREE is not supported yet");
                }

                for (int j = 0; j < fields.length; j++) {
                    if (fields[j].getType().equals(Integer.TYPE)) {
                        dos[j].writeInt(fields[j].getInt(stockObject));
                    } else if (fields[j].getType().equals(Double.TYPE)) {
                        dos[j].writeDouble(fields[j].getDouble(stockObject));
                    } else if (fields[j].getType().equals(Long.TYPE)) {
                        dos[j].writeLong(fields[j].getLong(stockObject));
                    } else {
                        continue;
                        //throw new RuntimeException("Field type is not supported yet");
                    }
                }
            }
            i_start = i_end;
        }
        index_dos.close();
        for (int i = 0; i < dos.length; i++) {
            dos[i].close();
        }

        /** A struct to store information about a split */
        class SplitStruct extends Prism {
            /** Start and end index for this split */
            int index1, index2;
            /** Direction of this split */
            byte direction;
            /** Index of first element on disk */
            int offsetOfFirstElement;

            static final byte DIRECTION_T = 0;
            static final byte DIRECTION_X = 1;
            static final byte DIRECTION_Y = 2;

            SplitStruct(int index1, int index2, byte direction) {
                this.index1 = index1;
                this.index2 = index2;
                this.direction = direction;
            }

            @Override
            public void write(DataOutput out) throws IOException {
                //
                if (columnarStorage)
                    out.writeInt(index1);
                else
                    out.writeInt(offsetOfFirstElement);
                super.write(out);
            }

            void partition(Queue<SplitStruct> toBePartitioned) {
                IndexedSortable sortableT;
                IndexedSortable sortableX;
                IndexedSortable sortableY;

                if (fast_sort) {
                    // Use materialized xs[] and ys[] to do the comparisons
                    sortableT = new IndexedSortable() {
                        @Override
                        public void swap(int i, int j) {
                            // Swap ts
                            double tempt = ts[i];
                            ts[i] = ts[j];
                            ts[j] = tempt;
                            // Swap xs
                            double tempx = xs[i];
                            xs[i] = xs[j];
                            xs[j] = tempx;
                            // Swap ys
                            double tempY = ys[i];
                            ys[i] = ys[j];
                            ys[j] = tempY;
                            // Swap id
                            int tempid = offsets[i];
                            offsets[i] = offsets[j];
                            offsets[j] = tempid;

                            tempid = ids[i];
                            ids[i] = ids[j];
                            ids[j] = tempid;
                        }

                        @Override
                        public int compare(int i, int j) {
                            if (ts[i] < ts[j])
                                return -1;
                            if (ts[i] > ts[j])
                                return 1;
                            return 0;
                        }
                    };
                    sortableX = new IndexedSortable() {
                        @Override
                        public void swap(int i, int j) {
                            // Swap ts
                            double tempt = ts[i];
                            ts[i] = ts[j];
                            ts[j] = tempt;
                            // Swap xs
                            double tempx = xs[i];
                            xs[i] = xs[j];
                            xs[j] = tempx;
                            // Swap ys
                            double tempY = ys[i];
                            ys[i] = ys[j];
                            ys[j] = tempY;
                            // Swap id
                            int tempid = offsets[i];
                            offsets[i] = offsets[j];
                            offsets[j] = tempid;
                            tempid = ids[i];
                            ids[i] = ids[j];
                            ids[j] = tempid;
                        }

                        @Override
                        public int compare(int i, int j) {
                            if (ts[i] < ts[j])
                                return -1;
                            if (xs[i] < xs[j])
                                return -1;
                            if (xs[i] > xs[j])
                                return 1;
                            return 0;
                        }
                    };

                    sortableY = new IndexedSortable() {
                        @Override
                        public void swap(int i, int j) {
                            // Swap ts
                            double tempt = ts[i];
                            ts[i] = ts[j];
                            ts[j] = tempt;
                            // Swap xs
                            double tempx = xs[i];
                            xs[i] = xs[j];
                            xs[j] = tempx;
                            // Swap ys
                            double tempY = ys[i];
                            ys[i] = ys[j];
                            ys[j] = tempY;
                            // Swap id
                            int tempid = offsets[i];
                            offsets[i] = offsets[j];
                            offsets[j] = tempid;

                            tempid = ids[i];
                            ids[i] = ids[j];
                            ids[j] = tempid;
                        }

                        @Override
                        public int compare(int i, int j) {
                            if (ys[i] < ys[j])
                                return -1;
                            if (ys[i] > ys[j])
                                return 1;
                            return 0;
                        }
                    };
                } else {
                    // No materialized xs and ys. Always deserialize objects
                    // to compare
                    sortableT = new IndexedSortable() {
                        @Override
                        public void swap(int i, int j) {
                            // Swap id
                            int tempid = offsets[i];
                            offsets[i] = offsets[j];
                            offsets[j] = tempid;

                            tempid = ids[i];
                            ids[i] = ids[j];
                            ids[j] = tempid;
                        }

                        @Override
                        public int compare(int i, int j) {
                            // Get end of line
                            int eol = skipToEOL(element_bytes, offsets[i]);
                            line.set(element_bytes, offsets[i], eol - offsets[i] - 1);
                            stockObject.fromText(line);
                            double ti = (stockObject.getMBR().t1 + stockObject.getMBR().t2) / 2;

                            eol = skipToEOL(element_bytes, offsets[j]);
                            line.set(element_bytes, offsets[j], eol - offsets[j] - 1);
                            stockObject.fromText(line);
                            double tj = (stockObject.getMBR().t1 + stockObject.getMBR().t2) / 2;
                            if (ti < tj)
                                return -1;
                            if (ti > tj)
                                return 1;
                            return 0;
                        }
                    };
                    sortableX = new IndexedSortable() {
                        @Override
                        public void swap(int i, int j) {
                            // Swap id
                            int tempid = offsets[i];
                            offsets[i] = offsets[j];
                            offsets[j] = tempid;

                            tempid = ids[i];
                            ids[i] = ids[j];
                            ids[j] = tempid;
                        }

                        @Override
                        public int compare(int i, int j) {
                            // Get end of line
                            int eol = skipToEOL(element_bytes, offsets[i]);
                            line.set(element_bytes, offsets[i], eol - offsets[i] - 1);
                            stockObject.fromText(line);
                            double xi = (stockObject.getMBR().x1 + stockObject.getMBR().x2) / 2;

                            eol = skipToEOL(element_bytes, offsets[j]);
                            line.set(element_bytes, offsets[j], eol - offsets[j] - 1);
                            stockObject.fromText(line);
                            double xj = (stockObject.getMBR().x1 + stockObject.getMBR().x2) / 2;
                            if (xi < xj)
                                return -1;
                            if (xi > xj)
                                return 1;
                            return 0;
                        }
                    };

                    sortableY = new IndexedSortable() {
                        @Override
                        public void swap(int i, int j) {
                            // Swap id
                            int tempid = offsets[i];
                            offsets[i] = offsets[j];
                            offsets[j] = tempid;

                            tempid = ids[i];
                            ids[i] = ids[j];
                            ids[j] = tempid;
                        }

                        @Override
                        public int compare(int i, int j) {
                            int eol = skipToEOL(element_bytes, offsets[i]);
                            line.set(element_bytes, offsets[i], eol - offsets[i] - 1);
                            stockObject.fromText(line);
                            double yi = (stockObject.getMBR().y1 + stockObject.getMBR().y2) / 2;

                            eol = skipToEOL(element_bytes, offsets[j]);
                            line.set(element_bytes, offsets[j], eol - offsets[j] - 1);
                            stockObject.fromText(line);
                            double yj = (stockObject.getMBR().y1 + stockObject.getMBR().y2) / 2;
                            if (yi < yj)
                                return -1;
                            if (yi > yj)
                                return 1;
                            return 0;
                        }
                    };
                }

                final IndexedSorter sorter = new QuickSort();

                final IndexedSortable[] sortables = new IndexedSortable[3];
                sortables[SplitStruct.DIRECTION_T] = sortableT;
                sortables[SplitStruct.DIRECTION_X] = sortableX;
                sortables[SplitStruct.DIRECTION_Y] = sortableY;

                sorter.sort(sortables[direction], index1, index2);

                // Partition into maxEntries partitions (equally) and
                // create a SplitStruct for each partition
                int i1 = index1;
                for (int iSplit = 0; iSplit < degree; iSplit++) {
                    int i2 = index1 + (index2 - index1) * (iSplit + 1) / degree;
                    SplitStruct newSplit;
                    if (direction == 0) {
                        newSplit = new SplitStruct(i1, i2, (byte) 1);
                    } else if (direction == 1) {
                        newSplit = new SplitStruct(i1, i2, (byte) 2);
                    } else {
                        newSplit = new SplitStruct(i1, i2, (byte) 0);
                    }
                    toBePartitioned.add(newSplit);
                    i1 = i2;
                }
            }
        }

        // All nodes stored in level-order traversal
        Vector<SplitStruct> nodes = new Vector<SplitStruct>();
        final Queue<SplitStruct> toBePartitioned = new LinkedList<SplitStruct>();
        toBePartitioned.add(new SplitStruct(0, elementCount, SplitStruct.DIRECTION_X));

        while (!toBePartitioned.isEmpty()) {
            SplitStruct split = toBePartitioned.poll();
            if (nodes.size() < nonLeafNodeCount) {
                // This is a non-leaf
                split.partition(toBePartitioned);
            }
            nodes.add(split);
        }

        if (nodes.size() != nodeCount) {
            throw new RuntimeException(
                    "Expected node count: " + nodeCount + ". Real node count: " + nodes.size());
        }

        // Now we have our data sorted in the required order. Start building
        // the tree.
        // Store the offset of each leaf node in the tree
        FSDataOutputStream fakeOut = new FSDataOutputStream(new java.io.OutputStream() {
            // Null output stream
            @Override
            public void write(int b) throws IOException {
                // Do nothing
            }

            @Override
            public void write(byte[] b, int off, int len) throws IOException {
                // Do nothing
            }

            @Override
            public void write(byte[] b) throws IOException {
                // Do nothing
            }
        }, null, TreeHeaderSize + nodes.size() * NodeSize);
        for (int i_leaf = nonLeafNodeCount, i = 0; i_leaf < nodes.size(); i_leaf++) {
            nodes.elementAt(i_leaf).offsetOfFirstElement = (int) fakeOut.getPos();
            if (i != nodes.elementAt(i_leaf).index1)
                throw new RuntimeException();
            double t1, x1, y1, t2, x2, y2;

            // Initialize MBR to first object
            int eol = skipToEOL(element_bytes, offsets[i]);
            fakeOut.write(element_bytes, offsets[i], eol - offsets[i]);
            line.set(element_bytes, offsets[i], eol - offsets[i] - 1);
            stockObject.fromText(line);
            Prism mbr = stockObject.getMBR();
            t1 = mbr.t1;
            x1 = mbr.x1;
            y1 = mbr.y1;
            t2 = mbr.t2;
            x2 = mbr.x2;
            y2 = mbr.y2;
            i++;

            while (i < nodes.elementAt(i_leaf).index2) {
                eol = skipToEOL(element_bytes, offsets[i]);
                fakeOut.write(element_bytes, offsets[i], eol - offsets[i]);
                line.set(element_bytes, offsets[i], eol - offsets[i] - 1);
                stockObject.fromText(line);
                mbr = stockObject.getMBR();
                if (mbr.t1 < t1)
                    t1 = mbr.t1;
                if (mbr.x1 < x1)
                    x1 = mbr.x1;
                if (mbr.y1 < y1)
                    y1 = mbr.y1;
                if (mbr.t2 > t2)
                    t2 = mbr.t2;
                if (mbr.x2 > x2)
                    x2 = mbr.x2;
                if (mbr.y2 > y2)
                    y2 = mbr.y2;
                i++;
            }
            nodes.elementAt(i_leaf).set(t1, x1, y1, t2, x2, y2);
        }
        fakeOut.close();
        fakeOut = null;

        // Calculate MBR and offsetOfFirstElement for non-leaves
        for (int i_node = nonLeafNodeCount - 1; i_node >= 0; i_node--) {
            int i_first_child = i_node * degree + 1;
            nodes.elementAt(i_node).offsetOfFirstElement = nodes.elementAt(i_first_child).offsetOfFirstElement;
            int i_child = 0;
            Prism mbr;
            mbr = nodes.elementAt(i_first_child + i_child);
            double t1 = mbr.t1;
            double x1 = mbr.x1;
            double y1 = mbr.y1;
            double t2 = mbr.t2;
            double x2 = mbr.x2;
            double y2 = mbr.y2;
            i_child++;

            while (i_child < degree) {
                mbr = nodes.elementAt(i_first_child + i_child);
                if (mbr.t1 < t1)
                    t1 = mbr.t1;
                if (mbr.x1 < x1)
                    x1 = mbr.x1;
                if (mbr.y1 < y1)
                    y1 = mbr.y1;
                if (mbr.t2 > t2)
                    t2 = mbr.t2;
                if (mbr.x2 > x2)
                    x2 = mbr.x2;
                if (mbr.y2 > y2)
                    y2 = mbr.y2;
                i_child++;
            }
            nodes.elementAt(i_node).set(t1, x1, y1, t2, x2, y2);
        }

        // Start writing the tree
        // write tree header (including size)
        // Total tree size. (== Total bytes written - 8 bytes for the size
        // itself)
        dataOut.writeInt(TreeHeaderSize + NodeSize * nodeCount + len);
        // Tree height
        dataOut.writeInt(height);
        // Degree
        dataOut.writeInt(degree);
        dataOut.writeInt(elementCount);

        //isColumnar
        dataOut.writeInt(columnarStorage ? 1 : 0);

        // write nodes
        for (SplitStruct node : nodes) {
            node.write(dataOut);
        }
        // write elements
        if (columnarStorage) {
            byte[] index_bs = index_bos.toByteArray();
            byte[][] bss = new byte[bos.length][];
            for (int i = 0; i < bss.length; i++) {
                bss[i] = bos[i].toByteArray();
            }
            for (int element_i = 0; element_i < elementCount; element_i++) {
                //int eol = skipToEOL(element_bytes, offsets[element_i]);
                //dataOut.write(element_bytes, offsets[element_i], eol - offsets[element_i]);
                dataOut.write(index_bs, ids[element_i] * IndexUnitSize, IndexUnitSize);
            }

            for (int i = 0; i < fields.length; i++) {
                int fieldSize = 0;
                if (fields[i].getType().equals(Integer.TYPE)) {
                    fieldSize = 4;
                } else if (fields[i].getType().equals(Long.TYPE)) {
                    fieldSize = 8;
                } else if (fields[i].getType().equals(Double.TYPE)) {
                    fieldSize = 8;
                } else {
                    //throw new RuntimeException("Unsupported field type: " + fields[i].getType().getName());
                    continue;
                }
                for (int element_i = 0; element_i < elementCount; element_i++) {
                    //int eol = skipToEOL(element_bytes, offsets[element_i]);
                    //dataOut.write(element_bytes, offsets[element_i], eol - offsets[element_i]);
                    dataOut.write(bss[i], ids[element_i] * fieldSize, fieldSize);
                }
            }
        } else {
            for (int element_i = 0; element_i < elementCount; element_i++) {
                int eol = skipToEOL(element_bytes, offsets[element_i]);
                dataOut.write(element_bytes, offsets[element_i], eol - offsets[element_i]);
            }
        }

    } catch (IOException e) {
        e.printStackTrace();
    } catch (IllegalArgumentException e) {
        // TODO Auto-generated catch block
        e.printStackTrace();
    } catch (IllegalAccessException e) {
        // TODO Auto-generated catch block
        e.printStackTrace();
    }
}

From source file:org.apache.geode.internal.InternalDataSerializer.java

/**
 * write a set of Long objects/*  ww w .j a va2  s.  co  m*/
 * 
 * @param set the set of Long objects
 * @param hasLongIDs if false, write only ints, not longs
 * @param out the output stream
 */
public static void writeSetOfLongs(Set set, boolean hasLongIDs, DataOutput out) throws IOException {
    if (set == null) {
        out.writeInt(-1);
    } else {
        out.writeInt(set.size());
        out.writeBoolean(hasLongIDs);
        for (Object aSet : set) {
            Long l = (Long) aSet;
            if (hasLongIDs) {
                out.writeLong(l);
            } else {
                out.writeInt((int) l.longValue());
            }
        }
    }
}

From source file:org.apache.geode.internal.InternalDataSerializer.java

/**
 * write a set of Long objects TODO: writeListOfLongs is unused
 * // w w  w.  ja  va2  s  .c  o  m
 * @param list the set of Long objects
 * @param hasLongIDs if false, write only ints, not longs
 * @param out the output stream
 */
public static void writeListOfLongs(List list, boolean hasLongIDs, DataOutput out) throws IOException {
    if (list == null) {
        out.writeInt(-1);
    } else {
        out.writeInt(list.size());
        out.writeBoolean(hasLongIDs);
        for (Object aList : list) {
            Long l = (Long) aList;
            if (hasLongIDs) {
                out.writeLong(l);
            } else {
                out.writeInt((int) l.longValue());
            }
        }
    }
}

From source file:org.apache.hadoop.mapred.ReduceTask.java

@Override
public void write(DataOutput out) throws IOException {
    super.write(out);

    out.writeInt(numMaps); // write the number of maps
}

From source file:org.apache.hadoop.mapred.RecoverReducerTask.java

@Override
public void write(DataOutput out) throws IOException {
    super.write(out);
    out.writeInt(numMaps); // write the number of maps
}

From source file:hybridewah.HybridBitmap.java

/**
 * Serialize.//from w  ww.  j  a v a2  s  .  c  o m
 * 
 * @param out
 *          the DataOutput stream
 * @throws IOException
 *           Signals that an I/O exception has occurred.
 */
public void serialize(DataOutput out) throws IOException {
    out.writeInt(this.sizeinbits);
    out.writeInt(this.actualsizeinwords);
    for (int k = 0; k < this.actualsizeinwords; ++k)
        out.writeLong(this.buffer[k]);
    out.writeInt(this.rlw.position);
}

From source file:org.apache.geode.internal.InternalDataSerializer.java

/**
 * Persist this class's map to out TODO: saveRegistrations is unused
 *//*from  w w  w. j a v a2 s. co  m*/
public static void saveRegistrations(DataOutput out) throws IOException {
    for (Object v : idsToSerializers.values()) {
        if (v instanceof InitMarker) {
            v = ((Marker) v).getSerializer();
        }
        if (v instanceof DataSerializer) {
            DataSerializer ds = (DataSerializer) v;
            out.writeInt(ds.getId()); // since 5.7 an int instead of a byte
            DataSerializer.writeClass(ds.getClass(), out);
        }
    }
    if (!dsClassesToHolders.isEmpty()) {
        Iterator<Entry<String, SerializerAttributesHolder>> iterator = dsClassesToHolders.entrySet().iterator();
        Class dsClass = null;
        while (iterator.hasNext()) {
            try {
                dsClass = getCachedClass(iterator.next().getKey());
            } catch (ClassNotFoundException ignored) {
                logger.info(LogMarker.SERIALIZER,
                        LocalizedMessage.create(
                                LocalizedStrings.InternalDataSerializer_COULD_NOT_LOAD_DATASERIALIZER_CLASS_0,
                                dsClass));
                continue;
            }
            DataSerializer ds = register(dsClass, false);
            iterator.remove();
            idsToHolders.remove(ds.getId());
            for (Class clazz : ds.getSupportedClasses()) {
                supportedClassesToHolders.remove(clazz.getName());
            }

            out.writeInt(ds.getId()); // since 5.7 an int instead of a byte
            DataSerializer.writeClass(ds.getClass(), out);
        }
    }
    // We know that DataSerializer's id must be > 0 so write a zero
    // to mark the end of the ds list.
    out.writeInt(0); // since 5.7 an int instead of a byte
}

From source file:org.apache.geode.internal.InternalDataSerializer.java

public static void writeArrayLength(int len, DataOutput out) throws IOException {
    if (len == -1) {
        out.writeByte(NULL_ARRAY);// w  w  w. j  a  v  a2s  . co m
    } else if (len <= MAX_BYTE_ARRAY_LEN) {
        out.writeByte(len);
    } else if (len <= 0xFFFF) {
        out.writeByte(SHORT_ARRAY_LEN);
        out.writeShort(len);
    } else {
        out.writeByte(INT_ARRAY_LEN);
        out.writeInt(len);
    }
}