List of usage examples for java.io BufferedWriter append
public Writer append(CharSequence csq) throws IOException
From source file:com.codesourcery.installer.actions.EnvironmentAction.java
/** * Handles Linux path environment.// w ww . j a v a 2 s .c om * * @param product Product * @param mode Mode * @param monitor Progress monitor * @throws CoreException on failure */ private void runLinux(IInstallProduct product, IInstallMode mode, IProgressMonitor monitor) throws CoreException { // Path to .profile String homeDir = System.getProperty("user.home"); if (homeDir == null) Installer.fail("Failed to get user home directory."); IPath homePath = new Path(homeDir); // Check for profile String profileFilename = null; File profileFile = null; for (String name : PROFILE_FILENAMES) { IPath profilePath = homePath.append(name); profileFile = profilePath.toFile(); if (profileFile.exists()) { profileFilename = name; break; } else { Installer.log(name + " not found, skipping."); } } if (profileFilename == null) { // Create a new profile. profileFilename = PROFILE_FILENAMES[PROFILE_DEFAULT_INDEX]; IPath newProfilePath = homePath.append(profileFilename); try { profileFile = newProfilePath.toFile(); profileFile.createNewFile(); } catch (IOException e) { Installer.log("Could not create profile " + newProfilePath); return; } } // Do not modify read-only profile if (!profileFile.canWrite()) { Installer.log("Profile was not modified because it is read-only."); return; } // File date suffix SimpleDateFormat fileDateFormat = new SimpleDateFormat("yyyyDDDHHmmss"); String fileDateDesc = fileDateFormat.format(new Date()); // Backup file path String backupName = profileFilename + fileDateDesc; IPath backupPath = homePath.append(backupName); File backupFile = backupPath.toFile(); String line; // Install if (mode.isInstall()) { // Date description SimpleDateFormat dateFormat = new SimpleDateFormat("EEE MMM dd HH:mm:ss yyyy"); String dateDesc = dateFormat.format(new Date()); // Make backup of .profile try { org.apache.commons.io.FileUtils.copyFile(profileFile, backupFile); } catch (IOException e) { Installer.fail(InstallMessages.Error_FailedToBackupProfile, e); } // Write path extensions BufferedWriter writer = null; try { writer = new BufferedWriter(new FileWriter(profileFile, true)); writer.newLine(); // Write product block start writer.append(getProfileMarker(product, true)); writer.newLine(); writer.append("# Do NOT modify these lines; they are used to uninstall."); writer.newLine(); line = MessageFormat.format("# New environment added by {0} on {1}.", new Object[] { product.getName(), dateDesc }); writer.append(line); writer.newLine(); line = MessageFormat.format("# The unmodified version of this file is saved in {0}.", backupPath.toOSString()); writer.append(line); writer.newLine(); monitor.setTaskName("Setting environment variables..."); for (EnvironmentVariable environmentVariable : environmentVariables) { monitor.setTaskName( NLS.bind(InstallMessages.SettingEnvironment, environmentVariable.getName())); StringBuilder buffer = new StringBuilder(); buffer.append(environmentVariable.getName()); buffer.append('='); // Append variable if (environmentVariable.getOperation() == EnvironmentOperation.APPEND) { buffer.append("${"); buffer.append(environmentVariable.getName()); buffer.append("}"); buffer.append(environmentVariable.getDelimiter()); } boolean path = "PATH".equals(environmentVariable.getName()); if (path) buffer.append('\"'); buffer.append(environmentVariable.getValue()); if (path) buffer.append('\"'); if (environmentVariable.getOperation() == EnvironmentOperation.PREPEND) { buffer.append(environmentVariable.getDelimiter()); buffer.append("${"); buffer.append(environmentVariable.getName()); buffer.append("}"); } writer.append(buffer.toString()); writer.newLine(); writer.append("export "); writer.append(environmentVariable.getName()); writer.newLine(); } // Write product block end writer.append(getProfileMarker(product, false)); writer.newLine(); } catch (IOException e) { Installer.fail(InstallMessages.Error_FailedToUpdateProfile, e); } finally { if (writer != null) { try { writer.close(); } catch (IOException e) { // Ignore } } } } // Uninstall else { BufferedReader reader = null; BufferedWriter writer = null; boolean inProductBlock = false; try { reader = new BufferedReader(new FileReader(profileFile)); writer = new BufferedWriter(new FileWriter(backupFile)); while ((line = reader.readLine()) != null) { // Start of product path block if (line.startsWith(getProfileMarker(product, true))) { inProductBlock = true; } // End of product path block else if (line.startsWith(getProfileMarker(product, false))) { inProductBlock = false; } // If not in product path block, copy lines else if (!inProductBlock) { writer.write(line); writer.newLine(); } } } catch (IOException e) { Installer.fail(InstallMessages.Error_FailedToUpdateProfile, e); } finally { if (reader != null) { try { reader.close(); } catch (IOException e) { // Ignore } } if (writer != null) { try { writer.close(); } catch (IOException e) { // Ignore } } } // Copy new profile try { org.apache.commons.io.FileUtils.copyFile(backupFile, profileFile); } catch (IOException e) { Installer.fail(InstallMessages.Error_FailedToUpdateProfile, e); } backupFile.delete(); } }
From source file:org.ihtsdo.statistics.Processor.java
/** * Prints the report.//from w w w. jav a2 s .c o m * * @param bw the bw * @param detail the detail * @throws Exception the exception */ private void printReport(BufferedWriter bw, OutputDetailFile detail) throws Exception { SQLStatementExecutor executor = new SQLStatementExecutor(connection); for (StoredProcedure sProc : detail.getStoredProcedure()) { executor.executeStoredProcedure(sProc, ImportManager.params, null); ResultSet rs = executor.getResultSet(); if (rs != null) { ResultSetMetaData meta = rs.getMetaData(); while (rs.next()) { for (int i = 0; i < meta.getColumnCount(); i++) { Object obj = rs.getObject(i + 1); if (obj != null) { bw.append(obj.toString().replaceAll(",", ",").trim()); } else { bw.append("missing_data"); } if (i + 1 < meta.getColumnCount()) { bw.append(","); } else { bw.append("\r\n"); } } } meta = null; rs.close(); } } executor = null; }
From source file:analytics.storage.store2csv.java
@Override public void storeRepositoryData(String repoName, int noRecords, float avgFSize, float storageReq, float informativeness, String schema) { // TODO Auto-generated method stub ConfigureLogger conf = new ConfigureLogger(); String sFileName = repoName + "_GeneralInfo" + ".csv"; Properties props = new Properties(); try {//from w ww. jav a2 s .c om props.load(new FileInputStream("configure.properties")); } catch (FileNotFoundException e1) { // TODO Auto-generated catch block e1.printStackTrace(); System.exit(-1); } catch (IOException e1) { // TODO Auto-generated catch block e1.printStackTrace(); System.exit(-1); } ; File anls = new File(props.getProperty(AnalyticsConstants.resultsPath) + "Analysis_Results"); if (!anls.exists()) anls.mkdir(); File dir = new File(anls, repoName); if (!dir.exists()) dir.mkdir(); File file = new File(dir, sFileName); Logger logger = conf.getLogger("generalInfo", anls + File.separator + "repoGeneralInfo.log"); StringBuffer logString = new StringBuffer(); this.setGeneralDataFilePath(file.getAbsolutePath()); FileWriter writer; BufferedWriter bw = null; try { writer = new FileWriter(file); bw = new BufferedWriter(writer); // create header bw.append("Repository Name"); bw.append(","); bw.append("Number of records"); bw.append(","); bw.append("Average file size(bytes)"); bw.append(","); bw.append("Approximate Storage requirements(bytes)"); bw.append(","); bw.append("Repository Informativeness(bits)"); bw.append(","); bw.append("Metadata schema namespace"); bw.newLine(); // insert data bw.append(repoName); logString.append(repoName); bw.append(","); bw.append(String.valueOf(noRecords)); logString.append(" " + String.valueOf(noRecords)); bw.append(","); bw.append(String.valueOf(avgFSize)); logString.append(" " + String.valueOf(avgFSize)); bw.append(","); bw.append(String.valueOf(storageReq)); logString.append(" " + String.valueOf(storageReq)); bw.append(","); bw.append(String.valueOf(informativeness)); logString.append(" " + String.valueOf(informativeness)); bw.append(","); bw.append(schema); logString.append(" " + schema); bw.close(); logger.info(logString.toString()); } catch (IOException e) { // TODO Auto-generated catch block e.printStackTrace(); } finally { try { if (bw != null) bw.close(); } catch (IOException ex) { ex.printStackTrace(); } } }
From source file:org.dkpro.tc.ml.liblinear.LiblinearDataWriter.java
@Override public void write(File outputDirectory, FeatureStore featureStore, boolean useDenseInstances, String learningMode, boolean applyWeighting) throws Exception { FeatureNodeArrayEncoder encoder = new FeatureNodeArrayEncoder(); FeatureNode[][] nodes = encoder.featueStore2FeatureNode(featureStore); String fileName = LiblinearAdapter.getInstance() .getFrameworkFilename(AdapterNameEntries.featureVectorsFile); BufferedWriter bw = new BufferedWriter( new OutputStreamWriter(new FileOutputStream(new File(outputDirectory, fileName)), "utf-8")); Map<String, String> index2instanceId = new HashMap<>(); for (int i = 0; i < nodes.length; i++) { Instance instance = featureStore.getInstance(i); recordInstanceId(instance, i, index2instanceId); List<String> elements = new ArrayList<String>(); for (int j = 0; j < nodes[i].length; j++) { FeatureNode node = nodes[i][j]; int index = node.getIndex(); double value = node.getValue(); // write sparse values, i.e. skip zero values if (Math.abs(value) > 0.00000000001) { elements.add(index + ":" + value); }/*from w w w. j a va 2 s. c o m*/ } bw.append(instance.getOutcome()); bw.append("\t"); bw.append(StringUtils.join(elements, "\t")); bw.append("\n"); } bw.close(); //write mapping writeMapping(outputDirectory, INDEX2INSTANCEID, index2instanceId); }
From source file:org.gwaspi.statistics.ChiSqrBoundaryCalculator.java
protected static void calculateChisqrBoundaryByVariance() throws IOException, MathException { FileWriter repFW = new FileWriter(boundaryPath); BufferedWriter repBW = new BufferedWriter(repFW); NetcdfFile ncfile = NetcdfFile.open(netCDFFile); List<Dimension> dims = ncfile.getDimensions(); Dimension sizeDim = dims.get(0); Dimension simsDim = dims.get(1); String varName = "distributions"; Variable distributions = ncfile.findVariable(varName); try {// w ww. ja v a 2 s . c o m for (int i = 0; i < pointsNb; i++) { // distributions(i:i:1, 0:simsNb:1) ArrayDouble.D2 rdDoubleArrayD2 = (ArrayDouble.D2) distributions .read(i + ":" + i + ":1, 0:" + (simsDim.getLength() - 1) + ":1"); ArrayDouble.D1 rdDoubleArrayD1 = (D1) rdDoubleArrayD2.reduce(); double sampleSize = rdDoubleArrayD2.getSize(); double currentTot = 0; double[] allValues = new double[(int) sampleSize]; for (int j = 0; j < sampleSize; j++) { allValues[j] = rdDoubleArrayD1.get(j); currentTot += rdDoubleArrayD1.get(j); } Variance variance = new Variance(); double varianceValue = variance.evaluate(allValues); double currentAvg = currentTot / simNb; double low95 = currentAvg - varianceValue; double top95 = currentAvg + varianceValue; StringBuilder sb = new StringBuilder(); sb.append(top95); sb.append(","); sb.append(currentAvg); sb.append(","); sb.append(low95); repBW.append(sb + "\n"); } } catch (IOException ex) { log.error("Cannot read data", ex); } catch (InvalidRangeException ex) { log.error("Cannot read data", ex); } repBW.close(); repFW.close(); log.info("Confidence boundary created for {} points", N); }
From source file:org.pentaho.telemetry.serializers.EventSerializerCSV.java
protected boolean serializeEventsToFile(String fileName, List<TelemetryEvent> events) { BufferedWriter bw = null; try {//w ww. j a va 2 s.c om bw = new BufferedWriter(new OutputStreamWriter(new FileOutputStream(fileName), "UTF-8")); } catch (FileNotFoundException ex) { logger.error("Unable to open file for writing. FileName: " + fileName, ex); return false; } catch (UnsupportedEncodingException ex) { logger.error("Unsupported encoding UTF-8?", ex); return false; } StringBuilder line = new StringBuilder(); line.append("pluginName").append(CSV_SEPARATOR).append("pluginVersion").append(CSV_SEPARATOR) .append("platformVersion").append(CSV_SEPARATOR).append("timestamp").append(CSV_SEPARATOR) .append("type").append(CSV_SEPARATOR).append("origin").append(CSV_SEPARATOR).append("extraInfo"); try { bw.append(line.toString()); bw.newLine(); for (TelemetryEvent te : events) { line.delete(0, line.length()); line.append(safeCsvString(te.getPluginName())).append(CSV_SEPARATOR) .append(safeCsvString(te.getPluginVersion())).append(CSV_SEPARATOR) .append(safeCsvString(te.getPlatformVersion())).append(CSV_SEPARATOR) .append(te.getEventTimestamp()).append(CSV_SEPARATOR).append(te.getEventType().name()) .append(CSV_SEPARATOR).append(safeCsvString(te.getOrigin())).append(CSV_SEPARATOR) .append(safeCsvString(getExtraInfoAsString(te.getExtraInfo()))); bw.append(line.toString()); bw.newLine(); } bw.flush(); bw.close(); } catch (IOException ioe) { logger.error("Unable to save csv file with telemetry events", ioe); return false; } return true; }
From source file:com.roamtouch.menuserver.utils.FileUtils.java
public void storeLog(String text) { boolean first = false; File logFolder = new File(app.getSDCARD() + "/httpd/log/files/"); if (!logFolder.exists()) { logFolder.mkdir();/* w ww.j av a 2 s. c o m*/ } String dateFormat = app.getTimeDate("dd_MM_yyyy"); File logFile = new File(logFolder.toString() + "/" + getWeekDay() + "_" + dateFormat + "" + ".json"); if (!logFile.exists()) { try { logFile.createNewFile(); writeHTMLLog(); first = true; } catch (IOException e) { e.printStackTrace(); } } else { removeLastCharacter(logFile); } try { BufferedWriter buf = new BufferedWriter(new FileWriter(logFile, true)); String[] data = text.split("-"); String dataJson = toLogJSON(data); String d = null; if (first) { d = "[" + dataJson + "]"; } else { d = "," + dataJson + "]"; } String formatted = new String(d.getBytes("ISO-8859-1"), "UTF-8"); buf.append(d); buf.close(); } catch (IOException e) { e.printStackTrace(); } }
From source file:com.jflyfox.modules.filemanager.FileManager.java
public void log(String filename, String msg) { try {// ww w . jav a 2 s . c om BufferedWriter out = new BufferedWriter(new FileWriter(filename, true)); out.append(msg + "\r\n"); out.close(); } catch (IOException e) { e.printStackTrace(); } }
From source file:com.roamtouch.menuserver.utils.FileUtils.java
public void storeBackupLog(String text) { boolean first = false; File logFolder = new File(app.getSDCARD() + "/httpd/backup/log"); if (!logFolder.exists()) { logFolder.mkdir();/*w w w . j a v a2s . co m*/ } String dateFormat = app.getTimeDate("dd_MM_yyyy"); //File logFile = new File(logFolder.toString()+ "/" + getWeekDay() + "_" + dateFormat + "" + ".json"); File logFile = new File(logFolder + "/backup_log.json"); if (!logFile.exists()) { try { logFile.createNewFile(); //writeHTMLLog(); first = true; } catch (IOException e) { e.printStackTrace(); } } else { removeLastCharacter(logFile); } try { BufferedWriter buf = new BufferedWriter(new FileWriter(logFile, true)); String[] data = text.split("\\^"); String dataJson = toBuckupLogJSON(data); String d = null; if (first) { d = "[" + dataJson + "]"; } else { d = "," + dataJson + "]"; } String formatted = new String(d.getBytes("ISO-8859-1"), "UTF-8"); buf.append(d); buf.close(); } catch (IOException e) { e.printStackTrace(); } }
From source file:com.termmed.statistics.db.importer.ImportManager.java
/** * Save new check./* w w w . j ava 2s . c o m*/ * * @param table the table * @param newChk the new chk * @throws IOException Signals that an I/O exception has occurred. */ private void saveNewCheck(TABLE table, String newChk) throws IOException { if (!dataFolder.exists()) { dataFolder.mkdirs(); } File file = new File(dataFolder, table.name() + ".dat"); BufferedWriter bw = getWriter(file.getAbsolutePath()); bw.append(newChk); bw.append("\r\n"); bw.close(); bw = null; }