List of usage examples for java.awt Rectangle getCenterY
public double getCenterY()
From source file:org.broad.igv.renderer.SpliceJunctionRenderer.java
/** * Draw a filled arc representing a single feature. The thickness and height of the arc are proportional to the * depth of coverage. Some of this gets a bit arcane -- the result of lots of visual tweaking. * * @param pixelFeatureStart the starting position of the feature, whether on-screen or not * @param pixelFeatureEnd the ending position of the feature, whether on-screen or not * @param pixelJunctionStart the starting position of the junction, whether on-screen or not * @param pixelJunctionEnd the ending position of the junction, whether on-screen or not * @param depth coverage depth * @param trackRectangle/*from www. j a v a 2 s .c o m*/ * @param context * @param strand * @param junctionFeature * @param shouldHighlight * @param featureColor the color specified for this feature. May be null. */ protected void drawFeature(int pixelFeatureStart, int pixelFeatureEnd, int pixelJunctionStart, int pixelJunctionEnd, float depth, Rectangle trackRectangle, RenderContext context, Strand strand, SpliceJunctionFeature junctionFeature, boolean shouldHighlight, Color featureColor, boolean shouldShowFlankingRegions) { boolean isPositiveStrand = true; // Get the feature's direction, color appropriately if (strand != null && strand.equals(Strand.NEGATIVE)) isPositiveStrand = false; //If the feature color is specified, use it, except that we set our own alpha depending on whether //the feature is highlighted. Otherwise default based on strand and highlight. Color color; if (featureColor != null) { int r = featureColor.getRed(); int g = featureColor.getGreen(); int b = featureColor.getBlue(); int alpha = shouldHighlight ? 255 : 140; color = new Color(r, g, b, alpha); } else { if (isPositiveStrand) color = shouldHighlight ? ARC_COLOR_HIGHLIGHT_POS : ARC_COLOR_POS; else color = shouldHighlight ? ARC_COLOR_HIGHLIGHT_NEG : ARC_COLOR_NEG; } Graphics2D g2D = context.getGraphic2DForColor(color); if (PreferenceManager.getInstance().getAsBoolean(PreferenceManager.ENABLE_ANTIALISING)) { g2D.setRenderingHint(RenderingHints.KEY_ANTIALIASING, RenderingHints.VALUE_ANTIALIAS_ON); g2D.setRenderingHint(RenderingHints.KEY_TEXT_ANTIALIASING, RenderingHints.VALUE_TEXT_ANTIALIAS_ON); } //Height of top of an arc of maximum depth int maxPossibleArcHeight = (trackRectangle.height - 1) / 2; if (shouldShowFlankingRegions) { if (junctionFeature.hasFlankingRegionDepthArrays()) { //draw a wigglegram of the splice junction flanking region depth of coverage int startFlankingRegionPixelLength = pixelJunctionStart - pixelFeatureStart; int endFlankingRegionPixelLength = pixelFeatureEnd - pixelJunctionEnd; drawFlankingRegion(g2D, pixelFeatureStart, startFlankingRegionPixelLength, junctionFeature.getStartFlankingRegionDepthArray(), maxPossibleArcHeight, trackRectangle, isPositiveStrand); drawFlankingRegion(g2D, pixelJunctionEnd + 1, endFlankingRegionPixelLength, junctionFeature.getEndFlankingRegionDepthArray(), maxPossibleArcHeight, trackRectangle, isPositiveStrand); } else { //Draw rectangles indicating the overlap on each side of the junction int overlapRectHeight = 3; int overlapRectTopX = (int) trackRectangle.getCenterY() + (isPositiveStrand ? -2 : 0); if (pixelFeatureStart < pixelJunctionStart) { g2D.fillRect(pixelFeatureStart, overlapRectTopX, pixelJunctionStart - pixelFeatureStart, overlapRectHeight); } if (pixelJunctionEnd < pixelFeatureEnd) { g2D.fillRect(pixelJunctionEnd, overlapRectTopX, pixelFeatureEnd - pixelJunctionEnd, overlapRectHeight); } } } //Create a path describing the arc, using Bezier curves. The Bezier control points for the top and //bottom arcs are based on the boundary points of the rectangles containing the arcs //proportion of the maximum arc height used by a minimum-height arc double minArcHeightProportion = 0.33; int innerArcHeight = (int) (maxPossibleArcHeight * minArcHeightProportion); float depthProportionOfMax = Math.min(1, depth / maxDepth); int arcWidth = Math.max(1, (int) ((1 - minArcHeightProportion) * maxPossibleArcHeight * depthProportionOfMax)); int outerArcHeight = innerArcHeight + arcWidth; //Height of bottom of the arc int arcBeginY = (int) trackRectangle.getCenterY() + (isPositiveStrand ? -1 : 1); int outerArcPeakY = isPositiveStrand ? arcBeginY - outerArcHeight : arcBeginY + outerArcHeight; int innerArcPeakY = isPositiveStrand ? arcBeginY - innerArcHeight : arcBeginY + innerArcHeight; //dhmay: I don't really understand Bezier curves. For some reason I have to put the Bezier control //points farther up or down than I want the arcs to extend. This multiplier seems about right int outerBezierY = arcBeginY + (int) (1.3 * (outerArcPeakY - arcBeginY)); int innerBezierY = arcBeginY + (int) (1.3 * (innerArcPeakY - arcBeginY)); //Putting the Bezier control points slightly off to the sides of the arc int bezierXPad = Math.max(1, (pixelJunctionEnd - pixelJunctionStart) / 30); GeneralPath arcPath = new GeneralPath(); arcPath.moveTo(pixelJunctionStart, arcBeginY); arcPath.curveTo(pixelJunctionStart - bezierXPad, outerBezierY, //Bezier 1 pixelJunctionEnd + bezierXPad, outerBezierY, //Bezier 2 pixelJunctionEnd, arcBeginY); //Arc end arcPath.curveTo(pixelJunctionEnd + bezierXPad, innerBezierY, //Bezier 1 pixelJunctionStart - bezierXPad, innerBezierY, //Bezier 2 pixelJunctionStart, arcBeginY); //Arc end //Draw the arc, to ensure outline is drawn completely (fill won't do it, necessarily). This will also //give the arc a darker outline g2D.draw(arcPath); //Fill the arc g2D.fill(arcPath); g2D.setRenderingHint(RenderingHints.KEY_ANTIALIASING, RenderingHints.VALUE_ANTIALIAS_DEFAULT); g2D.setRenderingHint(RenderingHints.KEY_TEXT_ANTIALIASING, RenderingHints.VALUE_TEXT_ANTIALIAS_DEFAULT); }
From source file:ru.runa.wfe.graph.image.figure.AbstractFigure.java
public Point getBendpoint() { Rectangle allRect = getRectangle(); return new Point((int) allRect.getCenterX(), (int) allRect.getCenterY()); }
From source file:ru.runa.wfe.graph.image.figure.AbstractFigure.java
protected AngleInfo getTransitionAngle(double x, double y) { Rectangle rect = getRectangle(); double cx = rect.getCenterX(); double cy = rect.getCenterY(); if (x == cx) { return y - cy > 0 ? new AngleInfo(Double.MAX_VALUE, AngleInfo.QUARTER_IV) : new AngleInfo(Double.MAX_VALUE, AngleInfo.QUARTER_II); } else {//from www . j a v a 2 s. c o m double critAngle = rect.getHeight() / rect.getWidth(); AngleInfo angleInfo = new AngleInfo(); angleInfo.setAngle((y - cy) / (x - cx)); if (Math.abs(angleInfo.getAngle()) > critAngle) { if (y - cy > 0) { // IV angleInfo.setQuarter(AngleInfo.QUARTER_IV); } else { // II angleInfo.setQuarter(AngleInfo.QUARTER_II); } } else { if (x - cx > 0) { // I angleInfo.setQuarter(AngleInfo.QUARTER_I); } else { // III angleInfo.setQuarter(AngleInfo.QUARTER_III); } } return angleInfo; } }
From source file:ru.runa.wfe.graph.image.figure.AbstractFigure.java
public Point getTransitionPoint(Transition transition, double x, double y) { AngleInfo angle = getTransitionAngle(x, y); Rectangle r = getRectangle(); double cx = r.getCenterX(); double cy = r.getCenterY(); Line line1 = createBorderLine(angle); Line line2 = LineUtils.createLine(new Point((int) cx, (int) cy), angle.getAngle()); Point intersectionPoint = LineUtils.getIntersectionPoint(line1, line2); return intersectionPoint; }