Example usage for java.awt Graphics2D setPaint

List of usage examples for java.awt Graphics2D setPaint

Introduction

In this page you can find the example usage for java.awt Graphics2D setPaint.

Prototype

public abstract void setPaint(Paint paint);

Source Link

Document

Sets the Paint attribute for the Graphics2D context.

Usage

From source file:userinterface.graph.PrismErrorRenderer.java

/**
 * Draws the visual representation for one data item.
 *
 * @param g2  the graphics output target.
 * @param state  the renderer state./* w  w w.j av a  2s  .  c  o  m*/
 * @param dataArea  the data area.
 * @param info  the plot rendering info.
 * @param plot  the plot.
 * @param domainAxis  the domain axis.
 * @param rangeAxis  the range axis.
 * @param dataset  the dataset.
 * @param series  the series index.
 * @param item  the item index.
 * @param crosshairState  the crosshair state.
 * @param pass  the pass index
 * @author Muhammad Omer Saeed.
 */

@Override
public void drawItem(Graphics2D g2, XYItemRendererState state, Rectangle2D dataArea, PlotRenderingInfo info,
        XYPlot plot, ValueAxis domainAxis, ValueAxis rangeAxis, XYDataset dataset, int series, int item,
        CrosshairState crosshairState, int pass) {

    if (!drawError) {
        super.drawItem(g2, state, dataArea, info, plot, domainAxis, rangeAxis, dataset, series, item,
                crosshairState, pass);
        return;
    }

    switch (currentMethod) {

    case PrismErrorRenderer.ERRORBARS:

        if (pass == 0 && dataset instanceof XYSeriesCollection && getItemVisible(series, item)) {

            synchronized (dataset) {

                XYSeriesCollection collection = (XYSeriesCollection) dataset;

                PlotOrientation orientation = plot.getOrientation();
                // draw the error bar for the y-interval
                XYSeries s = collection.getSeries(series);
                PrismXYDataItem it = (PrismXYDataItem) s.getDataItem(item);

                double y0 = it.getYValue() + it.getError();
                double y1 = it.getYValue() - it.getError();
                double x = collection.getXValue(series, item);

                RectangleEdge edge = plot.getRangeAxisEdge();
                double yy0 = rangeAxis.valueToJava2D(y0, dataArea, edge);
                double yy1 = rangeAxis.valueToJava2D(y1, dataArea, edge);
                double xx = domainAxis.valueToJava2D(x, dataArea, plot.getDomainAxisEdge());
                Line2D line;
                Line2D cap1;
                Line2D cap2;
                double adj = this.capLength / 2.0;
                if (orientation == PlotOrientation.VERTICAL) {
                    line = new Line2D.Double(xx, yy0, xx, yy1);
                    cap1 = new Line2D.Double(xx - adj, yy0, xx + adj, yy0);
                    cap2 = new Line2D.Double(xx - adj, yy1, xx + adj, yy1);
                } else { // PlotOrientation.HORIZONTAL
                    line = new Line2D.Double(yy0, xx, yy1, xx);
                    cap1 = new Line2D.Double(yy0, xx - adj, yy0, xx + adj);
                    cap2 = new Line2D.Double(yy1, xx - adj, yy1, xx + adj);
                }

                g2.setPaint(getItemPaint(series, item));

                if (this.errorStroke != null) {
                    g2.setStroke(this.errorStroke);
                } else {
                    g2.setStroke(getItemStroke(series, item));
                }
                g2.draw(line);
                g2.draw(cap1);
                g2.draw(cap2);
            }

        }

        super.drawItem(g2, state, dataArea, info, plot, domainAxis, rangeAxis, dataset, series, item,
                crosshairState, pass);

        break;

    case PrismErrorRenderer.ERRORDEVIATION:

        synchronized (dataset) {
            // do nothing if item is not visible
            if (!getItemVisible(series, item)) {
                return;
            }

            // first pass draws the shading
            if (pass == 0) {

                XYSeriesCollection collection = (XYSeriesCollection) dataset;
                XYSeries s = collection.getSeries(series);
                PrismXYDataItem it = (PrismXYDataItem) s.getDataItem(item);

                State drState = (State) state;

                double x = collection.getXValue(series, item);
                double yLow = it.getYValue() - it.getError();
                double yHigh = it.getYValue() + it.getError();

                RectangleEdge xAxisLocation = plot.getDomainAxisEdge();
                RectangleEdge yAxisLocation = plot.getRangeAxisEdge();

                double xx = domainAxis.valueToJava2D(x, dataArea, xAxisLocation);
                double yyLow = rangeAxis.valueToJava2D(yLow, dataArea, yAxisLocation);
                double yyHigh = rangeAxis.valueToJava2D(yHigh, dataArea, yAxisLocation);

                PlotOrientation orientation = plot.getOrientation();
                if (orientation == PlotOrientation.HORIZONTAL) {
                    drState.lowerCoordinates.add(new double[] { yyLow, xx });
                    drState.upperCoordinates.add(new double[] { yyHigh, xx });
                } else if (orientation == PlotOrientation.VERTICAL) {
                    drState.lowerCoordinates.add(new double[] { xx, yyLow });
                    drState.upperCoordinates.add(new double[] { xx, yyHigh });
                }

                if (item == (dataset.getItemCount(series) - 1)) {
                    // last item in series, draw the lot...
                    // set up the alpha-transparency...
                    Composite originalComposite = g2.getComposite();
                    g2.setComposite(AlphaComposite.getInstance(AlphaComposite.SRC_OVER, (float) this.alpha));
                    g2.setPaint(getItemPaint(series, item));
                    GeneralPath area = new GeneralPath();
                    double[] coords = (double[]) drState.lowerCoordinates.get(0);
                    area.moveTo((float) coords[0], (float) coords[1]);
                    for (int i = 1; i < drState.lowerCoordinates.size(); i++) {
                        coords = (double[]) drState.lowerCoordinates.get(i);
                        area.lineTo((float) coords[0], (float) coords[1]);
                    }
                    int count = drState.upperCoordinates.size();
                    coords = (double[]) drState.upperCoordinates.get(count - 1);
                    area.lineTo((float) coords[0], (float) coords[1]);
                    for (int i = count - 2; i >= 0; i--) {
                        coords = (double[]) drState.upperCoordinates.get(i);
                        area.lineTo((float) coords[0], (float) coords[1]);
                    }
                    area.closePath();
                    g2.fill(area);
                    g2.setComposite(originalComposite);

                    drState.lowerCoordinates.clear();
                    drState.upperCoordinates.clear();
                }
            }
            if (isLinePass(pass)) {

                // the following code handles the line for the y-values...it's
                // all done by code in the super class
                if (item == 0) {
                    State s = (State) state;
                    s.seriesPath.reset();
                    s.setLastPointGood(false);
                }

                if (getItemLineVisible(series, item)) {
                    drawPrimaryLineAsPath(state, g2, plot, dataset, pass, series, item, domainAxis, rangeAxis,
                            dataArea);
                }
            }

            // second pass adds shapes where the items are ..
            else if (isItemPass(pass)) {

                // setup for collecting optional entity info...
                EntityCollection entities = null;
                if (info != null) {
                    entities = info.getOwner().getEntityCollection();
                }

                drawSecondaryPass(g2, plot, dataset, pass, series, item, domainAxis, dataArea, rangeAxis,
                        crosshairState, entities);
            }

        }

        break;
    default:
        return;
    }
}

From source file:org.earthtime.UPb_Redux.dateInterpretation.WeightedMeanGraphPanel.java

/**
 *
 * @param g2d// w  w w . ja  v a2s  .  c  om
 */
public void paint(Graphics2D g2d) {

    // setup painting parameters
    String fractionSortOrder = "name"; //random, weight, date
    if (getWeightedMeanOptions().containsKey("fractionSortOrder")) {
        fractionSortOrder = getWeightedMeanOptions().get("fractionSortOrder");
    }

    double rangeX = (getMaxX_Display() - getMinX_Display());
    double rangeY = (getMaxY_Display() - getMinY_Display());

    g2d.setClip(getLeftMargin(), getTopMargin(), getGraphWidth(), getGraphHeight());
    RenderingHints rh = g2d.getRenderingHints();
    rh.put(RenderingHints.KEY_ANTIALIASING, RenderingHints.VALUE_ANTIALIAS_ON);
    rh.put(RenderingHints.KEY_RENDERING, RenderingHints.VALUE_RENDER_QUALITY);
    g2d.setRenderingHints(rh);

    // walk the sampleDateInterpretations and produce graphs
    g2d.setPaint(Color.BLACK);
    g2d.setStroke(new BasicStroke(2.0f));
    g2d.setFont(new Font("SansSerif", Font.BOLD, 10));

    double barWidth = 15.0;
    double barGap = 10.0;
    double startSamX = 10.0;
    double saveStartSamX = 0.0;
    double samSpace = 3.0;

    for (int i = 0; i < selectedSampleDateModels.length; i++) {
        for (int j = 1; j < 9; j++) {
            if (selectedSampleDateModels[i][j] instanceof SampleDateModel) {

                final SampleDateModel SAM = ((SampleDateModel) selectedSampleDateModels[i][j]);
                double wMean = SAM.getValue().movePointLeft(6).doubleValue();
                double wMeanOneSigma = SAM.getOneSigmaAbs().movePointLeft(6).doubleValue();

                Path2D mean = new Path2D.Double(Path2D.WIND_NON_ZERO);

                // july 2008
                // modified to show de-selected fractions as gray
                // this means a new special list of fractionIDs is created fromall non-rejected fractions
                // and each instance is tested for being included
                // should eventually refactor
                Vector<String> allFIDs = new Vector<String>();
                for (String f : ((UPbReduxAliquot) SAM.getAliquot()).getAliquotFractionIDs()) {
                    // test added for Sample-based wm
                    if (SAM.fractionDateIsPositive(//
                            ((UPbReduxAliquot) SAM.getAliquot()).getAliquotFractionByName(f))) {
                        allFIDs.add(f);
                    }
                }

                final int iFinal = i;
                if (fractionSortOrder.equalsIgnoreCase("weight")) {
                    Collections.sort(allFIDs, new Comparator<String>() {

                        public int compare(String fID1, String fID2) {
                            double invertOneSigmaF1 = //
                                    1.0 //
                                            / ((UPbReduxAliquot) selectedSampleDateModels[iFinal][0])//
                                                    .getAliquotFractionByName(fID1)//
                                                    .getRadiogenicIsotopeDateByName(SAM.getDateName())//
                                                    .getOneSigmaAbs().movePointLeft(6).doubleValue();
                            double invertOneSigmaF2 = //
                                    1.0 //
                                            / ((UPbReduxAliquot) selectedSampleDateModels[iFinal][0])//
                                                    .getAliquotFractionByName(fID2)//
                                                    .getRadiogenicIsotopeDateByName(SAM.getDateName())//
                                                    .getOneSigmaAbs().movePointLeft(6).doubleValue();

                            return Double.compare(invertOneSigmaF2, invertOneSigmaF1);
                        }
                    });
                } else if (fractionSortOrder.equalsIgnoreCase("date")) {
                    Collections.sort(allFIDs, new Comparator<String>() {

                        public int compare(String fID1, String fID2) {
                            double dateF1 = //
                                    ((UPbReduxAliquot) selectedSampleDateModels[iFinal][0])//
                                            .getAliquotFractionByName(fID1)//
                                            .getRadiogenicIsotopeDateByName(SAM.getDateName())//
                                            .getValue().doubleValue();
                            double dateF2 = //
                                    ((UPbReduxAliquot) selectedSampleDateModels[iFinal][0])//
                                            .getAliquotFractionByName(fID2)//
                                            .getRadiogenicIsotopeDateByName(SAM.getDateName())//
                                            .getValue().doubleValue();

                            return Double.compare(dateF1, dateF2);
                        }
                    });
                } else if ( /* ! isInRandomMode() &&*/fractionSortOrder.equalsIgnoreCase("random")) {
                    Collections.shuffle(allFIDs, new Random());
                } else if (fractionSortOrder.equalsIgnoreCase("name")) {
                    // default to alphabetic by name
                    //Collections.sort(allFIDs);
                    // april 2010 give same lexigraphic ordering that UPbFractions get
                    Collections.sort(allFIDs, new IntuitiveStringComparator<String>());
                } else {
                    // do nothing
                }

                double actualWidthX = (allFIDs.size()) * (barWidth + barGap);//; + barGap;

                // plot 2-sigma of mean
                mean.moveTo((float) mapX(startSamX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(wMean + 2.0 * wMeanOneSigma, getMaxY_Display(), rangeY, graphHeight));
                mean.lineTo((float) mapX(startSamX + actualWidthX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(wMean + 2.0 * wMeanOneSigma, getMaxY_Display(), rangeY, graphHeight));
                mean.lineTo((float) mapX(startSamX + actualWidthX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(wMean - 2.0 * wMeanOneSigma, getMaxY_Display(), rangeY, graphHeight));
                mean.lineTo((float) mapX(startSamX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(wMean - 2.0 * wMeanOneSigma, getMaxY_Display(), rangeY, graphHeight));
                mean.closePath();

                g2d.setColor(ReduxConstants.mySampleYellowColor);
                g2d.fill(mean);
                g2d.setPaint(Color.BLACK);

                // plot 1-sigma of mean
                mean.reset();
                mean.moveTo((float) mapX(startSamX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(wMean + wMeanOneSigma, getMaxY_Display(), rangeY, graphHeight));
                mean.lineTo((float) mapX(startSamX + actualWidthX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(wMean + wMeanOneSigma, getMaxY_Display(), rangeY, graphHeight));
                mean.lineTo((float) mapX(startSamX + actualWidthX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(wMean - wMeanOneSigma, getMaxY_Display(), rangeY, graphHeight));
                mean.lineTo((float) mapX(startSamX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(wMean - wMeanOneSigma, getMaxY_Display(), rangeY, graphHeight));
                mean.closePath();

                g2d.setColor(ReduxConstants.ColorOfRedux);
                g2d.fill(mean);
                g2d.setPaint(Color.BLACK);

                // plot mean
                mean.reset();
                mean.moveTo((float) mapX(startSamX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(wMean, getMaxY_Display(), rangeY, graphHeight));
                mean.lineTo((float) mapX(startSamX + actualWidthX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(wMean, getMaxY_Display(), rangeY, graphHeight));
                g2d.setStroke(new BasicStroke(1.0f));
                g2d.draw(mean);
                g2d.setStroke(new BasicStroke(2.0f));

                saveStartSamX = startSamX;

                // plot fraction bars
                double minPoint = 5000.0;
                double maxWeight = 0.0;
                double totalWeight = 0.0;

                int barNum = 0;

                for (String fID : allFIDs) {
                    // the dateModel has an associated aliquot, but in sample mode, it is a
                    // standin aliquot for the sample.  to get the aliquot number for
                    // use in coloring fractions, we need to query the fraction itself
                    String aliquotName = sample.getAliquotNameByFractionID(fID);

                    Color includedFillColor = new Color(0, 0, 0);
                    if (sample.getSampleDateInterpretationGUISettings().getAliquotOptions().get(aliquotName)
                            .containsKey("includedFillColor")) {
                        String[] temp = //
                                sample.getSampleDateInterpretationGUISettings().getAliquotOptions()
                                        .get(aliquotName).get("includedFillColor").split(",");
                        includedFillColor = buildRGBColor(temp);
                    }

                    Fraction f = ((UPbReduxAliquot) selectedSampleDateModels[i][0])
                            .getAliquotFractionByName(fID);

                    double date = f.//((UPbReduxAliquot) selectedSampleDateModels[i][0]).getAliquotFractionByName(fID).//
                            getRadiogenicIsotopeDateByName(SAM.getDateName()).getValue().movePointLeft(6)
                            .doubleValue();
                    double twoSigma = f.//((UPbReduxAliquot) selectedSampleDateModels[i][0]).getAliquotFractionByName(fID).//
                            getRadiogenicIsotopeDateByName(SAM.getDateName()).getTwoSigmaAbs().movePointLeft(6)
                            .doubleValue();

                    if ((date - twoSigma) < minPoint) {
                        minPoint = (date - twoSigma);
                    }

                    double invertedOneSigma = //
                            1.0 //
                                    / f.//((UPbReduxAliquot) selectedSampleDateModels[i][0]).getAliquotFractionByName(fID).//
                                            getRadiogenicIsotopeDateByName(SAM.getDateName()).getOneSigmaAbs()
                                            .movePointLeft(6).doubleValue();

                    if (invertedOneSigma > maxWeight) {
                        maxWeight = invertedOneSigma;
                    }

                    Path2D bar = new Path2D.Double(Path2D.WIND_NON_ZERO);
                    bar.moveTo(
                            (float) mapX(saveStartSamX + ((barGap / 2.0) + barNum * (barWidth + barGap)),
                                    getMinX_Display(), rangeX, graphWidth),
                            (float) mapY(date + twoSigma, getMaxY_Display(), rangeY, graphHeight));
                    bar.lineTo(
                            (float) mapX(
                                    saveStartSamX + ((barGap / 2.0) + barNum * (barWidth + barGap)) + barWidth,
                                    getMinX_Display(), rangeX, graphWidth),
                            (float) mapY(date + twoSigma, getMaxY_Display(), rangeY, graphHeight));
                    bar.lineTo(
                            (float) mapX(
                                    saveStartSamX + ((barGap / 2.0) + barNum * (barWidth + barGap)) + barWidth,
                                    getMinX_Display(), rangeX, graphWidth),
                            (float) mapY(date - twoSigma, getMaxY_Display(), rangeY, graphHeight));
                    bar.lineTo(
                            (float) mapX(saveStartSamX + ((barGap / 2.0) + barNum * (barWidth + barGap)),
                                    getMinX_Display(), rangeX, graphWidth),
                            (float) mapY(date - twoSigma, getMaxY_Display(), rangeY, graphHeight));
                    bar.closePath();

                    Composite originalComposite = g2d.getComposite();

                    if (SAM.getIncludedFractionIDsVector().contains(fID)) {
                        g2d.setComposite(AlphaComposite.getInstance(AlphaComposite.SRC_OVER, 0.8f));
                        totalWeight += Math.pow(invertedOneSigma, 2.0);

                        // april 2014 experiment
                        if (f.getRgbColor() != 0) {
                            includedFillColor = new Color(f.getRgbColor());
                        }

                    } else {
                        g2d.setComposite(AlphaComposite.getInstance(AlphaComposite.SRC_OVER, 0.2f));
                    }

                    g2d.setPaint(includedFillColor);

                    g2d.draw(bar);
                    //restore composite
                    g2d.setComposite(originalComposite);

                    g2d.setColor(Color.black);

                    // label fraction at top
                    g2d.rotate(-Math.PI / 4.0,
                            (float) mapX(saveStartSamX + ((barGap / 2.0) + barNum * (barWidth + barGap)),
                                    getMinX_Display(), rangeX, graphWidth),
                            (float) mapY(date + twoSigma, getMaxY_Display(), rangeY, graphHeight));

                    g2d.drawString(
                            ((UPbReduxAliquot) selectedSampleDateModels[i][0]).getAliquotFractionByName(fID)
                                    .getFractionID(),
                            (float) mapX(saveStartSamX + ((barGap / 2.0) + barNum * (barWidth + barGap)),
                                    getMinX_Display(), rangeX, graphWidth) + 15,
                            (float) mapY(date + twoSigma, getMaxY_Display(), rangeY, graphHeight));

                    g2d.rotate(Math.PI / 4.0,
                            (float) mapX(saveStartSamX + ((barGap / 2.0) + barNum * (barWidth + barGap)),
                                    getMinX_Display(), rangeX, graphWidth),
                            (float) mapY(date + twoSigma, getMaxY_Display(), rangeY, graphHeight));

                    barNum++;
                    // startSamX += 2 * barWidth;
                    startSamX += barWidth + barGap;
                }

                // display three info boxes below weighted means
                // each tic is the height of one calculated y-axis tic
                // determine the y axis tic
                double minYtic = Math.ceil(getMinY_Display() * 100) / 100;
                double maxYtic = Math.floor(getMaxY_Display() * 100) / 100;
                double deltay = Math.rint((maxYtic - minYtic) * 10 + 0.5);
                double yTic = deltay / 100;

                double yTopSummary = minPoint - yTic / 2.0;// wMeanOneSigma;
                //double specialYTic = yTic;
                double yTopWeights = yTopSummary - yTic * 1.1;
                double yTopMSWD_PDF = yTopWeights - yTic * 1.1;

                // summary box
                Path2D box = new Path2D.Double(Path2D.WIND_NON_ZERO);
                box.moveTo((float) mapX(saveStartSamX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(yTopSummary, getMaxY_Display(), rangeY, graphHeight));
                box.lineTo((float) mapX(saveStartSamX + actualWidthX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(yTopSummary, getMaxY_Display(), rangeY, graphHeight));
                box.lineTo((float) mapX(saveStartSamX + actualWidthX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(yTopSummary - yTic, getMaxY_Display(), rangeY, graphHeight));
                box.lineTo((float) mapX(saveStartSamX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(yTopSummary - yTic, getMaxY_Display(), rangeY, graphHeight));
                box.closePath();

                g2d.setStroke(new BasicStroke(1.5f));
                g2d.draw(box);

                // Info Box
                g2d.drawString(//
                        SAM.getAliquot().getAliquotName(),
                        (float) mapX(saveStartSamX, getMinX_Display(), rangeX, graphWidth) + 4f,
                        (float) mapY(yTopSummary, getMaxY_Display(), rangeY, graphHeight) + 13f);
                g2d.drawString(//
                        SAM.getName(), (float) mapX(saveStartSamX, getMinX_Display(), rangeX, graphWidth) + 4f,
                        (float) mapY(yTopSummary, getMaxY_Display(), rangeY, graphHeight) + 25f);
                g2d.drawString(//
                        SAM.FormatValueAndTwoSigmaABSThreeWaysForPublication(6, 2),
                        (float) mapX(saveStartSamX, getMinX_Display(), rangeX, graphWidth) + 4f,
                        (float) mapY(yTopSummary, getMaxY_Display(), rangeY, graphHeight) + 36f);
                g2d.drawString(//
                        SAM.ShowCustomMSWDwithN(),
                        (float) mapX(saveStartSamX, getMinX_Display(), rangeX, graphWidth) + 4f,
                        (float) mapY(yTopSummary, getMaxY_Display(), rangeY, graphHeight) + 48f);

                // weights box
                box.reset();
                box.moveTo((float) mapX(saveStartSamX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(yTopWeights, getMaxY_Display(), rangeY, graphHeight));
                box.lineTo((float) mapX(saveStartSamX + actualWidthX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(yTopWeights, getMaxY_Display(), rangeY, graphHeight));
                box.lineTo((float) mapX(saveStartSamX + actualWidthX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(yTopWeights - yTic, getMaxY_Display(), rangeY, graphHeight));
                box.lineTo((float) mapX(saveStartSamX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(yTopWeights - yTic, getMaxY_Display(), rangeY, graphHeight));
                box.closePath();

                g2d.setStroke(new BasicStroke(1.5f));
                g2d.draw(box);

                // plot fraction weights
                double artificialXRange = allFIDs.size();
                double count = 0;
                //double weightWidth = Math.min(3.0 * barWidth, (yTic / rangeY * graphHeight)) - 15;//yTic;//barWidth * 2.0;
                double weightWidth = (barWidth + barGap) * 0.9;

                for (String fID : allFIDs) {
                    // the dateModel has an associated aliquot, but in sample mode, it is a
                    // standin aliquot for the sample.  to get the aliquot number for
                    // use in coloring fractions, we need to query the fraction itself
                    String aliquotName = sample.getAliquotNameByFractionID(fID);

                    Fraction f = ((UPbReduxAliquot) selectedSampleDateModels[i][0])
                            .getAliquotFractionByName(fID);

                    Color includedFillColor = new Color(0, 0, 0);
                    if (sample.getSampleDateInterpretationGUISettings().getAliquotOptions().get(aliquotName)
                            .containsKey("includedFillColor")) {
                        String[] temp = //
                                sample.getSampleDateInterpretationGUISettings().getAliquotOptions()
                                        .get(aliquotName).get("includedFillColor").split(",");
                        includedFillColor = buildRGBColor(temp);
                    }

                    double invertOneSigma = //
                            1.0 //
                                    / ((UPbReduxAliquot) selectedSampleDateModels[i][0])
                                            .getAliquotFractionByName(fID)//
                                            .getRadiogenicIsotopeDateByName(SAM.getDateName()).getOneSigmaAbs()
                                            .movePointLeft(6).doubleValue();

                    Path2D weight = new Path2D.Double(Path2D.WIND_NON_ZERO);
                    weight.moveTo(
                            (float) mapX(saveStartSamX + (count + 0.5) / artificialXRange * actualWidthX,
                                    getMinX_Display(), rangeX, graphWidth) //
                                    - (float) (invertOneSigma / maxWeight / 2.0 * weightWidth),
                            (float) mapY(yTopWeights - (yTic / 2.0), getMaxY_Display(), rangeY, graphHeight) //
                                    + (float) (invertOneSigma / maxWeight / 2.0 * weightWidth) - 5f);

                    weight.lineTo(
                            (float) mapX(saveStartSamX + (count + 0.5) / artificialXRange * actualWidthX,
                                    getMinX_Display(), rangeX, graphWidth) //
                                    + (float) (invertOneSigma / maxWeight / 2.0 * weightWidth),
                            (float) mapY(yTopWeights - (yTic / 2.0), getMaxY_Display(), rangeY, graphHeight) //
                                    + (float) (invertOneSigma / maxWeight / 2.0 * weightWidth) - 5f);

                    weight.lineTo(
                            (float) mapX(saveStartSamX + (count + 0.5) / artificialXRange * actualWidthX,
                                    getMinX_Display(), rangeX, graphWidth) //
                                    + (float) (invertOneSigma / maxWeight / 2.0 * weightWidth),
                            (float) mapY(yTopWeights - (yTic / 2.0), getMaxY_Display(), rangeY, graphHeight) //
                                    - (float) (invertOneSigma / maxWeight / 2.0 * weightWidth) - 5f);

                    weight.lineTo(
                            (float) mapX(saveStartSamX + (count + 0.5) / artificialXRange * actualWidthX,
                                    getMinX_Display(), rangeX, graphWidth) //
                                    - (float) (invertOneSigma / maxWeight / 2.0 * weightWidth),
                            (float) mapY(yTopWeights - (yTic / 2.0), getMaxY_Display(), rangeY, graphHeight) //
                                    - (float) (invertOneSigma / maxWeight / 2.0 * weightWidth) - 5f);

                    weight.closePath();

                    g2d.setStroke(new BasicStroke(2.5f));

                    // test for included or not == black or gray
                    String weightPerCent = "   0";//0.0%";

                    //                        g2d.setPaint(includedFillColor);
                    Composite originalComposite = g2d.getComposite();

                    if (SAM.getIncludedFractionIDsVector().contains(fID)) {
                        g2d.setComposite(AlphaComposite.getInstance(AlphaComposite.SRC_OVER, 0.8f));
                        weightPerCent = formatter1DecPlace
                                .format(Math.pow(invertOneSigma, 2.0) / totalWeight * 100.0);// + "%";

                        // april 2014 experiment
                        if (f.getRgbColor() != 0) {
                            includedFillColor = new Color(f.getRgbColor());
                        }
                    } else {
                        g2d.setComposite(AlphaComposite.getInstance(AlphaComposite.SRC_OVER, 0.2f));
                    }

                    g2d.setPaint(includedFillColor);

                    g2d.fill(weight);
                    //restore composite
                    g2d.setComposite(originalComposite);

                    // write percent of total weight
                    g2d.drawString(weightPerCent,
                            (float) mapX(saveStartSamX + (count + 0.5) / artificialXRange * actualWidthX,
                                    getMinX_Display(), rangeX, graphWidth) //
                                    - (float) (invertOneSigma / maxWeight / 2.0 * weightWidth),
                            (float) mapY(yTopWeights - yTic, getMaxY_Display(), rangeY, graphHeight) - 5f);
                    g2d.setColor(Color.black);

                    count += 1.0;

                }

                // double box height for graph
                yTic *= 2.0;

                // plot MSWD_PDF
                // store  function x,y values
                Vector<Double> xVals = new Vector<Double>();
                Vector<Double> yVals = new Vector<Double>();

                double f = SAM.getIncludedFractionIDsVector().size() - 1;
                if (f > 1.0) {
                    g2d.setStroke(new BasicStroke(1.0f));

                    double yRange = MSWDCoordinates.valuesByPointCount[(int) f][5] * 1.03; // alitle air at the top of curve
                    double xStart = MSWDCoordinates.valuesByPointCount[(int) f][1];
                    double xRange = MSWDCoordinates.valuesByPointCount[(int) f][4] - xStart;
                    double xStep = 0.005;

                    Path2D MSWD_PDF = new Path2D.Double(Path2D.WIND_NON_ZERO);
                    Path2D MSWD_right = new Path2D.Double(Path2D.WIND_NON_ZERO);

                    // start at lower left corner of box  (may or may not be 0,0 )
                    MSWD_PDF.moveTo(//
                            (float) mapX((double) saveStartSamX, getMinX_Display(), rangeX, graphWidth),
                            (float) mapY(yTopMSWD_PDF - yTic, getMaxY_Display(), rangeY, graphHeight));

                    // setup MSWD to paint last
                    Path2D MSWD = null;

                    // calculate function values
                    for (double x = xStart; x < xRange; x += xStep) {
                        xVals.add((((x - xStart) / xRange) * actualWidthX) + (double) saveStartSamX);

                        double y = //
                                Math.pow(2, -1.0 * f / 2.0)//
                                        * Math.exp(-1.0 * f * x / 2.0)//
                                        * Math.pow(f, f / 2.0)//
                                        * Math.pow(x, (-1.0 + f / 2.0))//
                                        / Math.exp(Gamma.logGamma(f / 2.0));

                        yVals.add(((y / yRange) * yTic) + yTopMSWD_PDF - yTic);

                        MSWD_PDF.lineTo(//
                                (float) mapX(xVals.lastElement(), getMinX_Display(), rangeX, graphWidth),
                                (float) mapY(yVals.lastElement(), getMaxY_Display(), rangeY, graphHeight));

                        // test for location of left RED zone
                        if ((MSWDCoordinates.valuesByPointCount[(int) f][2] >= x)
                                && (MSWDCoordinates.valuesByPointCount[(int) f][2] < (x + xStep))) {

                            double leftX = MSWDCoordinates.valuesByPointCount[(int) f][2];
                            xVals.add((((leftX - xStart) / xRange) * actualWidthX) + (double) saveStartSamX);

                            double leftY = //
                                    Math.pow(2, -1.0 * f / 2.0)//
                                            * Math.exp(-1.0 * f * leftX / 2.0)//
                                            * Math.pow(f, f / 2.0)//
                                            * Math.pow(leftX, (-1.0 + f / 2.0))//
                                            / Math.exp(Gamma.logGamma(f / 2.0));
                            yVals.add(((leftY / yRange) * yTic) + yTopMSWD_PDF - yTic);

                            MSWD_PDF.lineTo(//
                                    (float) mapX(xVals.lastElement(), getMinX_Display(), rangeX, graphWidth),
                                    (float) mapY(yVals.lastElement(), getMaxY_Display(), rangeY, graphHeight));

                            Path2D ciLower = new Path2D.Double(Path2D.WIND_NON_ZERO);
                            ciLower.append(MSWD_PDF.getPathIterator(new AffineTransform()), true);

                            ciLower.lineTo(//
                                    (float) mapX(xVals.lastElement(), getMinX_Display(), rangeX, graphWidth),
                                    (float) mapY(yTopMSWD_PDF - yTic, getMaxY_Display(), rangeY, graphHeight));
                            ciLower.closePath();
                            g2d.setColor(Color.RED);
                            g2d.fill(ciLower);

                            // draw right hand border line to compensate for a bug in the filler
                            Line2D right = new Line2D.Double(//
                                    mapX(xVals.lastElement(), getMinX_Display(), rangeX, graphWidth),
                                    mapY(yVals.lastElement(), getMaxY_Display(), rangeY, graphHeight),
                                    mapX(xVals.lastElement(), getMinX_Display(), rangeX, graphWidth),
                                    mapY(yTopMSWD_PDF - yTic, getMaxY_Display(), rangeY, graphHeight));
                            g2d.setStroke(new BasicStroke(0.5f));
                            g2d.draw(right);
                            g2d.setStroke(new BasicStroke(1.0f));

                            g2d.setColor(Color.BLACK);

                            System.out.println("Left Red = (" + leftX + ", " + leftY + ")");
                        }

                        // test for location of right RED zone
                        if ((MSWDCoordinates.valuesByPointCount[(int) f][3] >= x)
                                && (MSWDCoordinates.valuesByPointCount[(int) f][3] < (x + xStep))) {

                            double rightX = MSWDCoordinates.valuesByPointCount[(int) f][3];
                            xVals.add((((rightX - xStart) / xRange) * actualWidthX) + (double) saveStartSamX);

                            double rightY = //
                                    Math.pow(2, -1.0 * f / 2.0)//
                                            * Math.exp(-1.0 * f * rightX / 2.0)//
                                            * Math.pow(f, f / 2.0)//
                                            * Math.pow(rightX, (-1.0 + f / 2.0))//
                                            / Math.exp(Gamma.logGamma(f / 2.0));
                            yVals.add(((rightY / yRange) * yTic) + yTopMSWD_PDF - yTic);

                            MSWD_PDF.lineTo(//
                                    (float) mapX(xVals.lastElement(), getMinX_Display(), rangeX, graphWidth),
                                    (float) mapY(yVals.lastElement(), getMaxY_Display(), rangeY, graphHeight));

                            // here the strategy is to draw the curve and then reset it to record the remainder
                            g2d.setStroke(new BasicStroke(1.0f));
                            g2d.draw(MSWD_PDF);
                            MSWD_PDF = new Path2D.Double(Path2D.WIND_NON_ZERO);
                            MSWD_PDF.moveTo(//
                                    (float) mapX(xVals.lastElement(), getMinX_Display(), rangeX, graphWidth),
                                    (float) mapY(yVals.lastElement(), getMaxY_Display(), rangeY, graphHeight));

                            MSWD_right.moveTo(//
                                    (float) mapX(xVals.lastElement(), getMinX_Display(), rangeX, graphWidth),
                                    (float) mapY(yTopMSWD_PDF - yTic, getMaxY_Display(), rangeY, graphHeight));
                            MSWD_right.lineTo(//
                                    (float) mapX(xVals.lastElement(), getMinX_Display(), rangeX, graphWidth),
                                    (float) mapY(yVals.lastElement(), getMaxY_Display(), rangeY, graphHeight));

                            System.out.println("Right Red = (" + rightX + ", " + rightY + ")");

                        }

                        // test for location of MSWD AND paint last
                        if ((SAM.getMeanSquaredWeightedDeviation().doubleValue() >= x)
                                && (SAM.getMeanSquaredWeightedDeviation().doubleValue() < (x + xStep))) {
                            MSWD = new Path2D.Double(Path2D.WIND_NON_ZERO);
                            MSWD.moveTo(//
                                    (float) mapX(xVals.lastElement(), getMinX_Display(), rangeX, graphWidth),
                                    (float) mapY(yTopMSWD_PDF - yTic, getMaxY_Display(), rangeY, graphHeight));
                            MSWD.lineTo(//
                                    (float) mapX(xVals.lastElement(), getMinX_Display(), rangeX, graphWidth),
                                    (float) mapY(yVals.lastElement(), getMaxY_Display(), rangeY, graphHeight));

                        }
                    }
                    g2d.setStroke(new BasicStroke(1.0f));
                    // merge with border of right RED and fill
                    MSWD_right.append(MSWD_PDF.getPathIterator(new AffineTransform()), true);
                    g2d.setColor(Color.RED);
                    g2d.fill(MSWD_right);
                    g2d.setColor(Color.BLACK);
                    // draw the remaining curves
                    g2d.draw(MSWD_PDF);
                    // MSWD may be off the graph and hence not exist
                    try {
                        g2d.draw(MSWD);
                    } catch (Exception e) {
                    }

                    // label 95% conf interval and MSWD
                    g2d.drawString(//
                            "95% CI: ("
                                    + formatter2DecPlaces.format(MSWDCoordinates.valuesByPointCount[(int) f][2])
                                    + ", "
                                    + formatter2DecPlaces.format(MSWDCoordinates.valuesByPointCount[(int) f][3])
                                    + ")",
                            (float) mapX(saveStartSamX + (actualWidthX / 2.0), getMinX_Display(), rangeX,
                                    graphWidth) - 30f,
                            (float) mapY(yTopMSWD_PDF, getMaxY_Display(), rangeY, graphHeight) + 15f);

                    // determine if MSWD is out of range
                    String mswdAlert = "";
                    if (SAM.getMeanSquaredWeightedDeviation()
                            .doubleValue() > MSWDCoordinates.valuesByPointCount[(int) f][4]) {
                        mswdAlert = "\n !Out of Range!";
                    }
                    g2d.drawString(//
                            "MSWD = "
                                    + formatter2DecPlaces
                                            .format(SAM.getMeanSquaredWeightedDeviation().doubleValue())
                                    + ", n = " + (int) (f + 1) + mswdAlert,
                            (float) mapX(saveStartSamX + (actualWidthX / 2.0), getMinX_Display(), rangeX,
                                    graphWidth) - 15f,
                            (float) mapY(yTopMSWD_PDF, getMaxY_Display(), rangeY, graphHeight) + 30f);

                } else {
                    g2d.drawString("need more data...",
                            (float) mapX((double) saveStartSamX, getMinX_Display(), rangeX, graphWidth) + 4f,
                            (float) mapY(yTopMSWD_PDF - yTic, getMaxY_Display(), rangeY, graphHeight) - 10f);
                }

                // MSWD_PDF box
                box.reset();
                box.moveTo((float) mapX(saveStartSamX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(yTopMSWD_PDF, getMaxY_Display(), rangeY, graphHeight));
                box.lineTo((float) mapX(saveStartSamX + actualWidthX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(yTopMSWD_PDF, getMaxY_Display(), rangeY, graphHeight));
                box.lineTo((float) mapX(saveStartSamX + actualWidthX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(yTopMSWD_PDF - yTic, getMaxY_Display(), rangeY, graphHeight));
                box.lineTo((float) mapX(saveStartSamX, getMinX_Display(), rangeX, graphWidth),
                        (float) mapY(yTopMSWD_PDF - yTic, getMaxY_Display(), rangeY, graphHeight));
                box.closePath();

                g2d.setStroke(new BasicStroke(1.5f));
                g2d.draw(box);

                // MSWD_PDF x-axis tics
                if (f > 1.0) {
                    g2d.setStroke(new BasicStroke(1.0f));
                    double xStart = (MSWDCoordinates.valuesByPointCount[(int) f][1] <= 0.5) ? 0.5 : 1.0;
                    double xRange = MSWDCoordinates.valuesByPointCount[(int) f][4]
                            - MSWDCoordinates.valuesByPointCount[(int) f][1];
                    double xStep = 0.5;

                    for (double x = xStart; x < xRange; x += xStep) {
                        double xPlot = (((x - MSWDCoordinates.valuesByPointCount[(int) f][1]) / xRange)
                                * actualWidthX) + (double) saveStartSamX;
                        Line2D line = new Line2D.Double(mapX(xPlot, getMinX_Display(), rangeX, graphWidth),
                                mapY(yTopMSWD_PDF - yTic, getMaxY_Display(), rangeY, graphHeight),
                                mapX(xPlot, getMinX_Display(), rangeX, graphWidth),
                                mapY(yTopMSWD_PDF - yTic, getMaxY_Display(), rangeY, graphHeight) + 7);
                        g2d.draw(line);

                        g2d.rotate(-Math.PI / 2.0, (float) mapX(xPlot, getMinX_Display(), rangeX, graphWidth),
                                (float) mapY(yTopMSWD_PDF - yTic, getMaxY_Display(), rangeY, graphHeight));
                        g2d.drawString(formatter1DecPlace.format(x),
                                (float) mapX(xPlot, getMinX_Display(), rangeX, graphWidth) - 30f,
                                (float) mapY(yTopMSWD_PDF - yTic, getMaxY_Display(), rangeY, graphHeight) + 5f);
                        g2d.rotate(Math.PI / 2.0, (float) mapX(xPlot, getMinX_Display(), rangeX, graphWidth),
                                (float) mapY(yTopMSWD_PDF - yTic, getMaxY_Display(), rangeY, graphHeight));
                    }
                }

                // set counters
                barNum += samSpace;
                startSamX += 2 * samSpace * barWidth;
            }
        }
    }
    //        // prevents re-randomization
    //        setInRandomMode( true );

    drawAxesAndTicks(g2d, rangeX, rangeY);

    // draw zoom box if in use
    if ((Math.abs(zoomMaxX - zoomMinX) * Math.abs(zoomMinY - zoomMaxY)) > 0.0) {
        g2d.setStroke(new BasicStroke(2.0f));
        g2d.setColor(Color.red);
        g2d.drawRect(//
                Math.min(zoomMinX, zoomMaxX), Math.min(zoomMaxY, zoomMinY), Math.abs(zoomMaxX - zoomMinX),
                Math.abs(zoomMinY - zoomMaxY));
    }
}

From source file:ucar.unidata.idv.control.chart.WayPoint.java

/**
 * Draws the annotation./*from w  w w  . java  2  s . c  o m*/
 *
 * @param g2  the graphics device.
 * @param plot  the plot.
 * @param dataArea  the data area.
 * @param domainAxis  the domain axis.
 * @param rangeAxis  the range axis.
 * @param rendererIndex  the renderer index.
 * @param info  an optional info object that will be populated with
 *              entity information.
 */
public void draw(Graphics2D g2, XYPlot plot, Rectangle2D dataArea, ValueAxis domainAxis, ValueAxis rangeAxis,
        int rendererIndex, PlotRenderingInfo info) {
    super.setGraphicsState(g2);
    if (!getPlotWrapper().okToDraw(this)) {
        return;
    }

    g2.setStroke(new BasicStroke());
    if (false && getSelected()) {
        g2.setColor(COLOR_SELECTED);
    } else {
        g2.setColor(getColor());
    }
    x = getXFromValue(dataArea, domainAxis);

    int width2 = (int) (ANNOTATION_WIDTH / 2);
    int bottom = (int) (dataArea.getY() + dataArea.getHeight());
    y = bottom;
    int[] xs = { x - width2, x + width2, x, x - width2 };
    int[] ys = { bottom - ANNOTATION_WIDTH, bottom - ANNOTATION_WIDTH, bottom, bottom - ANNOTATION_WIDTH };
    g2.fillPolygon(xs, ys, xs.length);

    if ((getName() != null) && !isForAnimation) {
        FontMetrics fm = g2.getFontMetrics();
        int width = fm.stringWidth(getName());
        int textLeft = x - width / 2;
        g2.drawString(getName(), textLeft, bottom - ANNOTATION_WIDTH - 2);
    }

    if (getSelected()) {
        g2.setColor(COLOR_SELECTED);
        g2.drawPolygon(xs, ys, xs.length);
    }

    if (getPropertyListeners().hasListeners(PROP_WAYPOINTVALUE) || isForAnimation) {
        g2.setColor(Color.gray);
        g2.drawLine(x, y - ANNOTATION_WIDTH, x, (int) dataArea.getY());
    }

    boolean playSound = canPlaySound();

    if (isForAnimation) {
        if (clockImage == null) {
            clockImage = GuiUtils.getImage("/auxdata/ui/icons/clock.gif");
        }
        if (playSound) {
            g2.drawImage(clockImage, x - 8, (int) dataArea.getY() + 1, null);
        } else {
            g2.drawImage(clockImage, x - 8, (int) dataArea.getY() + 1, null);
        }
    }

    if (canPlaySound()) {
        if (noteImage == null) {
            noteImage = GuiUtils.getImage("/auxdata/ui/icons/note.gif");
        }
        if (isForAnimation) {
            g2.drawImage(noteImage, x + 8, (int) dataArea.getY() + 1, null);
        } else {
            g2.drawImage(noteImage, x, (int) dataArea.getY() + 1, null);
        }
    }

    if (minutesSpan > 0.0) {
        int left = (int) domainAxis.valueToJava2D(domainValue - (minutesSpan * 60000) / 2, dataArea,
                RectangleEdge.BOTTOM);
        int right = (int) domainAxis.valueToJava2D(domainValue + (minutesSpan * 60000) / 2, dataArea,
                RectangleEdge.BOTTOM);
        g2.setPaint(Color.black);
        g2.setStroke(new BasicStroke(2.0f));
        g2.drawLine(left, y, right, y);
    }

}

From source file:nl.strohalm.cyclos.utils.jfreeAsymmetric.AsymmetricStatisticalBarRenderer.java

/**
 * Draws an item for a plot with a vertical orientation.
 * /*from   www .  j  av  a  2s.c o m*/
 * @param g2 the graphics device.
 * @param state the renderer state.
 * @param dataArea the data area.
 * @param plot the plot.
 * @param domainAxis the domain axis.
 * @param rangeAxis the range axis.
 * @param dataset the data.
 * @param row the row index (zero-based).
 * @param column the column index (zero-based).
 */
protected void drawVerticalItem(final Graphics2D g2, final CategoryItemRendererState state,
        final Rectangle2D dataArea, final CategoryPlot plot, final CategoryAxis domainAxis,
        final ValueAxis rangeAxis, final StatisticalCategoryDataset dataset, final int row, final int column) {
    // nothing is drawn for null... //ADDED THIS BLOCK, RINKE
    final Number v = dataset.getValue(row, column);
    if (v == null) {
        return;
    }

    final RectangleEdge xAxisLocation = plot.getDomainAxisEdge();

    // BAR X
    double rectX = domainAxis.getCategoryStart(column, getColumnCount(), dataArea, xAxisLocation);

    final int seriesCount = getRowCount();
    final int categoryCount = getColumnCount();
    if (seriesCount > 1) {
        final double seriesGap = dataArea.getWidth() * getItemMargin() / (categoryCount * (seriesCount - 1));
        rectX = rectX + row * (state.getBarWidth() + seriesGap);
    } else {
        rectX = rectX + row * state.getBarWidth();
    }

    // BAR Y
    final Number meanValue = dataset.getMeanValue(row, column);

    double value = meanValue.doubleValue();
    double base = 0.0;
    final double lclip = getLowerClip();
    final double uclip = getUpperClip();

    if (uclip <= 0.0) { // cases 1, 2, 3 and 4
        if (value >= uclip) {
            return; // bar is not visible
        }
        base = uclip;
        if (value <= lclip) {
            value = lclip;
        }
    } else if (lclip <= 0.0) { // cases 5, 6, 7 and 8
        if (value >= uclip) {
            value = uclip;
        } else {
            if (value <= lclip) {
                value = lclip;
            }
        }
    } else { // cases 9, 10, 11 and 12
        if (value <= lclip) {
            return; // bar is not visible
        }
        base = getLowerClip();
        if (value >= uclip) {
            value = uclip;
        }
    }

    final RectangleEdge yAxisLocation = plot.getRangeAxisEdge();
    final double transY1 = rangeAxis.valueToJava2D(base, dataArea, yAxisLocation);
    final double transY2 = rangeAxis.valueToJava2D(value, dataArea, yAxisLocation);
    final double rectY = Math.min(transY2, transY1);

    final double rectWidth = state.getBarWidth();
    final double rectHeight = Math.abs(transY2 - transY1);

    final Rectangle2D bar = new Rectangle2D.Double(rectX, rectY, rectWidth, rectHeight);
    final Paint seriesPaint = getItemPaint(row, column);
    g2.setPaint(seriesPaint);
    g2.fill(bar);
    if (state.getBarWidth() > 3) {
        g2.setStroke(getItemStroke(row, column));
        g2.setPaint(getItemOutlinePaint(row, column));
        g2.draw(bar);
    }

    // standard deviation lines
    final AsymmetricStatisticalCategoryDataset asymmDataset = (AsymmetricStatisticalCategoryDataset) dataset;
    final Number highValRaw = asymmDataset.getUpperValue(row, column);
    final Number lowValRaw = asymmDataset.getLowerValue(row, column);
    // only draw if both error bars items are not null
    if (highValRaw != null && lowValRaw != null) { // ADDED THIS IF, RINKE
        final double highVal = rangeAxis.valueToJava2D(highValRaw.doubleValue(), dataArea, yAxisLocation);
        final double lowVal = rangeAxis.valueToJava2D(lowValRaw.doubleValue(), dataArea, yAxisLocation);

        if (getErrorIndicatorPaint() != null) {
            g2.setPaint(getErrorIndicatorPaint());
        } else {
            g2.setPaint(getItemOutlinePaint(row, column));
        }
        Line2D line = null;
        line = new Line2D.Double(rectX + rectWidth / 2.0d, lowVal, rectX + rectWidth / 2.0d, highVal);
        g2.draw(line);
        line = new Line2D.Double(rectX + rectWidth / 2.0d - 5.0d, highVal, rectX + rectWidth / 2.0d + 5.0d,
                highVal);
        g2.draw(line);
        line = new Line2D.Double(rectX + rectWidth / 2.0d - 5.0d, lowVal, rectX + rectWidth / 2.0d + 5.0d,
                lowVal);
        g2.draw(line);
    }

    final CategoryItemLabelGenerator generator = getItemLabelGenerator(row, column);
    if (generator != null && isItemLabelVisible(row, column)) {
        drawItemLabel(g2, dataset, row, column, plot, generator, bar, (value < 0.0));
    }

    // add an item entity, if this information is being collected
    final EntityCollection entities = state.getEntityCollection();
    if (entities != null) {
        addItemEntity(entities, dataset, row, column, bar);
    }
}

From source file:nl.strohalm.cyclos.utils.jfreeAsymmetric.AsymmetricStatisticalBarRenderer.java

/**
 * Draws an item for a plot with a horizontal orientation.
 * //w ww .  j  a v a2  s .co  m
 * @param g2 the graphics device.
 * @param state the renderer state.
 * @param dataArea the data area.
 * @param plot the plot.
 * @param domainAxis the domain axis.
 * @param rangeAxis the range axis.
 * @param dataset the data.
 * @param row the row index (zero-based).
 * @param column the column index (zero-based).
 */
protected void drawHorizontalItem(final Graphics2D g2, final CategoryItemRendererState state,
        final Rectangle2D dataArea, final CategoryPlot plot, final CategoryAxis domainAxis,
        final ValueAxis rangeAxis, final StatisticalCategoryDataset dataset, final int row, final int column) {
    // nothing is drawn for null... //added this test block, Rinke
    final Number v = dataset.getValue(row, column);
    if (v == null) {
        return;
    }

    final RectangleEdge xAxisLocation = plot.getDomainAxisEdge();

    // BAR Y
    double rectY = domainAxis.getCategoryStart(column, getColumnCount(), dataArea, xAxisLocation);

    final int seriesCount = getRowCount();
    final int categoryCount = getColumnCount();
    if (seriesCount > 1) {
        final double seriesGap = dataArea.getHeight() * getItemMargin() / (categoryCount * (seriesCount - 1));
        rectY = rectY + row * (state.getBarWidth() + seriesGap);
    } else {
        rectY = rectY + row * state.getBarWidth();
    }

    // BAR X
    final Number meanValue = dataset.getMeanValue(row, column);

    double value = meanValue.doubleValue();
    double base = 0.0;
    final double lclip = getLowerClip();
    final double uclip = getUpperClip();

    if (uclip <= 0.0) { // cases 1, 2, 3 and 4
        if (value >= uclip) {
            return; // bar is not visible
        }
        base = uclip;
        if (value <= lclip) {
            value = lclip;
        }
    } else if (lclip <= 0.0) { // cases 5, 6, 7 and 8
        if (value >= uclip) {
            value = uclip;
        } else {
            if (value <= lclip) {
                value = lclip;
            }
        }
    } else { // cases 9, 10, 11 and 12
        if (value <= lclip) {
            return; // bar is not visible
        }
        base = getLowerClip();
        if (value >= uclip) {
            value = uclip;
        }
    }

    final RectangleEdge yAxisLocation = plot.getRangeAxisEdge();
    final double transY1 = rangeAxis.valueToJava2D(base, dataArea, yAxisLocation);
    final double transY2 = rangeAxis.valueToJava2D(value, dataArea, yAxisLocation);
    final double rectX = Math.min(transY2, transY1);

    final double rectHeight = state.getBarWidth();
    final double rectWidth = Math.abs(transY2 - transY1);

    final Rectangle2D bar = new Rectangle2D.Double(rectX, rectY, rectWidth, rectHeight);
    final Paint seriesPaint = getItemPaint(row, column);
    g2.setPaint(seriesPaint);
    g2.fill(bar);
    if (state.getBarWidth() > 3) {
        g2.setStroke(getItemStroke(row, column));
        g2.setPaint(getItemOutlinePaint(row, column));
        g2.draw(bar);
    }
    // ********** BLOCK WITH CHANGES RELATIVE TO StatisticalBarRenderere *********************
    // standard deviation lines
    final AsymmetricStatisticalCategoryDataset asymmDataset = (AsymmetricStatisticalCategoryDataset) dataset;
    final Number highValRaw = asymmDataset.getUpperValue(row, column);
    final Number lowValRaw = asymmDataset.getLowerValue(row, column);
    if (highValRaw != null && lowValRaw != null) { // ADDED THIS IF, RINKE
        final double highVal = rangeAxis.valueToJava2D(highValRaw.doubleValue(), dataArea, yAxisLocation);
        final double lowVal = rangeAxis.valueToJava2D(lowValRaw.doubleValue(), dataArea, yAxisLocation);
        // *************************** end of block with changes ******************************

        if (getErrorIndicatorPaint() != null) {
            g2.setPaint(getErrorIndicatorPaint());
        } else {
            g2.setPaint(getItemOutlinePaint(row, column));
        }
        Line2D line = null;
        line = new Line2D.Double(lowVal, rectY + rectHeight / 2.0d, highVal, rectY + rectHeight / 2.0d);
        g2.draw(line);
        line = new Line2D.Double(highVal, rectY + rectHeight * 0.25, highVal, rectY + rectHeight * 0.75);
        g2.draw(line);
        line = new Line2D.Double(lowVal, rectY + rectHeight * 0.25, lowVal, rectY + rectHeight * 0.75);
        g2.draw(line);
    }

    final CategoryItemLabelGenerator generator = getItemLabelGenerator(row, column);
    if (generator != null && isItemLabelVisible(row, column)) {
        drawItemLabel(g2, dataset, row, column, plot, generator, bar, (value < 0.0));
    }

    // add an item entity, if this information is being collected
    final EntityCollection entities = state.getEntityCollection();
    if (entities != null) {
        addItemEntity(entities, dataset, row, column, bar);
    }

}

From source file:org.trade.ui.chart.renderer.PivotRenderer.java

/**
 * Draws the annotation.//from  www .j av a 2 s  . c  o m
 * 
 * @param g2
 *            the graphics device.
 * @param plot
 *            the plot.
 * @param dataArea
 *            the data area.
 * @param domainAxis
 *            the domain axis.
 * @param rangeAxis
 *            the range axis.
 * @param rendererIndex
 *            the renderer index.
 * @param info
 *            the plot rendering info.
 * @param angle
 *            double
 * @param x
 *            double
 * @param y
 *            double
 * @param ledgend
 *            String
 */
public void drawPivotArrow(Graphics2D g2, XYPlot plot, Rectangle2D dataArea, ValueAxis domainAxis,
        ValueAxis rangeAxis, int rendererIndex, PlotRenderingInfo info, double angle, double x, double y,
        String ledgend) {

    double tipRadius = DEFAULT_TIP_RADIUS;
    double baseRadius = DEFAULT_BASE_RADIUS;
    double arrowLength = DEFAULT_ARROW_LENGTH;
    double arrowWidth = DEFAULT_ARROW_WIDTH;
    double labelOffset = DEFAULT_LABEL_OFFSET;
    Font font = DEFAULT_FONT;
    Paint paint = DEFAULT_PAINT;
    boolean outlineVisible = false;
    Paint outlinePaint = Color.black;
    Stroke outlineStroke = new BasicStroke(0.5f);

    TextAnchor textAnchor = DEFAULT_TEXT_ANCHOR;
    TextAnchor rotationAnchor = DEFAULT_ROTATION_ANCHOR;
    double rotationAngle = DEFAULT_ROTATION_ANGLE;

    Stroke arrowStroke = new BasicStroke(1.0f);
    Paint arrowPaint = Color.black;

    PlotOrientation orientation = plot.getOrientation();
    RectangleEdge domainEdge = Plot.resolveDomainAxisLocation(plot.getDomainAxisLocation(), orientation);
    RectangleEdge rangeEdge = Plot.resolveRangeAxisLocation(plot.getRangeAxisLocation(), orientation);
    double j2DX = domainAxis.valueToJava2D(x, dataArea, domainEdge);
    double j2DY = rangeAxis.valueToJava2D(y, dataArea, rangeEdge);
    if (orientation == PlotOrientation.HORIZONTAL) {
        double temp = j2DX;
        j2DX = j2DY;
        j2DY = temp;
    }
    double startX = j2DX + (Math.cos(angle) * baseRadius);
    double startY = j2DY + (Math.sin(angle) * baseRadius);

    double endX = j2DX + (Math.cos(angle) * tipRadius);
    double endY = j2DY + (Math.sin(angle) * tipRadius);

    double arrowBaseX = endX + (Math.cos(angle) * arrowLength);
    double arrowBaseY = endY + (Math.sin(angle) * arrowLength);

    double arrowLeftX = arrowBaseX + (Math.cos(angle + (Math.PI / 2.0)) * arrowWidth);
    double arrowLeftY = arrowBaseY + (Math.sin(angle + (Math.PI / 2.0)) * arrowWidth);

    double arrowRightX = arrowBaseX - (Math.cos(angle + (Math.PI / 2.0)) * arrowWidth);
    double arrowRightY = arrowBaseY - (Math.sin(angle + (Math.PI / 2.0)) * arrowWidth);

    GeneralPath arrow = new GeneralPath();
    arrow.moveTo((float) endX, (float) endY);
    arrow.lineTo((float) arrowLeftX, (float) arrowLeftY);
    arrow.lineTo((float) arrowRightX, (float) arrowRightY);
    arrow.closePath();

    g2.setStroke(arrowStroke);
    g2.setPaint(arrowPaint);
    Line2D line = new Line2D.Double(startX, startY, endX, endY);
    g2.draw(line);
    g2.fill(arrow);

    // draw the label
    double labelX = j2DX + (Math.cos(angle) * (baseRadius + labelOffset));
    double labelY = j2DY + (Math.sin(angle) * (baseRadius + labelOffset));
    g2.setFont(font);
    Shape hotspot = TextUtilities.calculateRotatedStringBounds(ledgend, g2, (float) labelX, (float) labelY,
            textAnchor, rotationAngle, rotationAnchor);
    g2.setPaint(paint);
    TextUtilities.drawRotatedString(ledgend, g2, (float) labelX, (float) labelY, textAnchor, rotationAngle,
            rotationAnchor);
    if (outlineVisible) {
        g2.setStroke(outlineStroke);
        g2.setPaint(outlinePaint);
        g2.draw(hotspot);
    }

    // String toolTip = getToolTipText();
    // String url = getURL();
    // if (toolTip != null || url != null) {
    // addEntity(info, hotspot, rendererIndex, toolTip, url);
    // }

}

From source file:open.dolphin.impl.lbtest.IgnoreNullLineRenderer.java

/**
 * Draw a single data item./*from ww w  . j a va2  s . c om*/
 *
 * @param g2  the graphics device.
 * @param state  the renderer state.
 * @param dataArea  the area in which the data is drawn.
 * @param plot  the plot.
 * @param domainAxis  the domain axis.
 * @param rangeAxis  the range axis.
 * @param dataset  the dataset.
 * @param row  the row index (zero-based).
 * @param column  the column index (zero-based).
 * @param pass  the pass index.
 */
@Override
public void drawItem(Graphics2D g2, CategoryItemRendererState state, Rectangle2D dataArea, CategoryPlot plot,
        CategoryAxis domainAxis, ValueAxis rangeAxis, CategoryDataset dataset, int row, int column, int pass) {

    // do nothing if item is not visible
    if (!getItemVisible(row, column)) {
        return;
    }

    // do nothing if both the line and shape are not visible
    if (!getItemLineVisible(row, column) && !getItemShapeVisible(row, column)) {
        return;
    }

    // nothing is drawn for null...
    Number v = dataset.getValue(row, column);
    if (v == null) {
        return;
    }

    int visibleRow = state.getVisibleSeriesIndex(row);
    if (visibleRow < 0) {
        return;
    }
    int visibleRowCount = state.getVisibleSeriesCount();

    PlotOrientation orientation = plot.getOrientation();

    // current data point...
    double x1;
    if (getUseSeriesOffset()) {
        x1 = domainAxis.getCategorySeriesMiddle(column, dataset.getColumnCount(), visibleRow, visibleRowCount,
                getItemMargin(), dataArea, plot.getDomainAxisEdge());
    } else {
        x1 = domainAxis.getCategoryMiddle(column, getColumnCount(), dataArea, plot.getDomainAxisEdge());
    }
    double value = v.doubleValue();
    double y1 = rangeAxis.valueToJava2D(value, dataArea, plot.getRangeAxisEdge());

    if (pass == 0 && getItemLineVisible(row, column)) {
        if (column != 0) {
            int prevColumn = getPreviousNotNullColumn(dataset, row, column - 1);
            Number previousValue = (prevColumn != -1) ? dataset.getValue(row, prevColumn) : null;
            if (previousValue != null) {
                // previous data point...
                double previous = previousValue.doubleValue();
                double x0;
                if (getUseSeriesOffset()) {
                    x0 = domainAxis.getCategorySeriesMiddle(prevColumn, dataset.getColumnCount(), visibleRow,
                            visibleRowCount, getItemMargin(), dataArea, plot.getDomainAxisEdge());
                } else {
                    x0 = domainAxis.getCategoryMiddle(prevColumn, getColumnCount(), dataArea,
                            plot.getDomainAxisEdge());
                }
                double y0 = rangeAxis.valueToJava2D(previous, dataArea, plot.getRangeAxisEdge());

                Line2D line = null;
                if (orientation == PlotOrientation.HORIZONTAL) {
                    line = new Line2D.Double(y0, x0, y1, x1);
                } else if (orientation == PlotOrientation.VERTICAL) {
                    line = new Line2D.Double(x0, y0, x1, y1);
                }
                g2.setPaint(getItemPaint(row, column));
                g2.setStroke(getItemStroke(row, column));
                g2.draw(line);
            }
        }
    }

    if (pass == 1) {
        Shape shape = getItemShape(row, column);
        if (orientation == PlotOrientation.HORIZONTAL) {
            shape = ShapeUtilities.createTranslatedShape(shape, y1, x1);
        } else if (orientation == PlotOrientation.VERTICAL) {
            shape = ShapeUtilities.createTranslatedShape(shape, x1, y1);
        }

        if (getItemShapeVisible(row, column)) {
            if (getItemShapeFilled(row, column)) {
                if (getUseFillPaint()) {
                    g2.setPaint(getItemFillPaint(row, column));
                } else {
                    g2.setPaint(getItemPaint(row, column));
                }
                g2.fill(shape);
            }
            if (getDrawOutlines()) {
                if (getUseOutlinePaint()) {
                    g2.setPaint(getItemOutlinePaint(row, column));
                } else {
                    g2.setPaint(getItemPaint(row, column));
                }
                g2.setStroke(getItemOutlineStroke(row, column));
                g2.draw(shape);
            }
        }

        // draw the item label if there is one...
        if (isItemLabelVisible(row, column)) {
            if (orientation == PlotOrientation.HORIZONTAL) {
                drawItemLabel(g2, orientation, dataset, row, column, y1, x1, (value < 0.0));
            } else if (orientation == PlotOrientation.VERTICAL) {
                drawItemLabel(g2, orientation, dataset, row, column, x1, y1, (value < 0.0));
            }
        }

        // submit the current data point as a crosshair candidate
        int datasetIndex = plot.indexOf(dataset);
        updateCrosshairValues(state.getCrosshairState(), dataset.getRowKey(row), dataset.getColumnKey(column),
                value, datasetIndex, x1, y1, orientation);

        // add an item entity, if this information is being collected
        EntityCollection entities = state.getEntityCollection();
        if (entities != null) {
            addItemEntity(entities, dataset, row, column, shape);
        }
    }

}

From source file:gov.nih.nci.caintegrator.ui.graphing.chart.plot.BoxAndWhiskerCoinPlotRenderer.java

/**
 * Draws the visual representation of a single data item when the plot has 
 * a vertical orientation./*from  w w w . ja v a2s  .  co m*/
 *
 * @param g2  the graphics device.
 * @param state  the renderer state.
 * @param dataArea  the area within which the plot is being drawn.
 * @param plot  the plot (can be used to obtain standard color information 
 *              etc).
 * @param domainAxis  the domain axis.
 * @param rangeAxis  the range axis.
 * @param dataset  the dataset.
 * @param row  the row index (zero-based).
 * @param column  the column index (zero-based).
 */
public void drawVerticalItem(Graphics2D g2, CategoryItemRendererState state, Rectangle2D dataArea,
        CategoryPlot plot, CategoryAxis domainAxis, ValueAxis rangeAxis, CategoryDataset dataset, int row,
        int column) {

    BoxAndWhiskerCategoryDataset bawDataset = (BoxAndWhiskerCategoryDataset) dataset;

    double categoryEnd = domainAxis.getCategoryEnd(column, getColumnCount(), dataArea,
            plot.getDomainAxisEdge());
    double categoryStart = domainAxis.getCategoryStart(column, getColumnCount(), dataArea,
            plot.getDomainAxisEdge());
    double categoryWidth = categoryEnd - categoryStart;

    double xx = categoryStart;
    int seriesCount = getRowCount();
    int categoryCount = getColumnCount();

    if (seriesCount > 1) {
        double seriesGap = dataArea.getWidth() * getItemMargin() / (categoryCount * (seriesCount - 1));
        double usedWidth = (state.getBarWidth() * seriesCount) + (seriesGap * (seriesCount - 1));
        // offset the start of the boxes if the total width used is smaller
        // than the category width
        double offset = (categoryWidth - usedWidth) / 2;
        xx = xx + offset + (row * (state.getBarWidth() + seriesGap));
    } else {
        // offset the start of the box if the box width is smaller than the 
        // category width
        double offset = (categoryWidth - state.getBarWidth()) / 2;
        xx = xx + offset;
    }

    double yyAverage = 0.0;
    double yyOutlier;

    //      bar colors are determined by the Paint p obtained here in a rotational
    //manner (from a Color array).  By switching the column and raw values,
    //you can get a different color pattern for the bar:  In the method 
    //getItemPaint(), only the first argument counts for the color. The original
    //code Paint p = getItemPaint(row, column); is commented out for a difference.
    Paint p = null;
    if (this.getPlotColor() != null) {
        p = PaintUtilities.stringToColor(getPlotColor()); // coin plot should all be one color
    } else {
        p = getItemPaint(row, column);
    }

    // Paint p = PaintUtilities.stringToColor("red"); 
    if (p != null) {
        g2.setPaint(p);
    }

    Stroke s = getItemStroke(row, column);
    g2.setStroke(s);

    double aRadius = 0; // average radius

    RectangleEdge location = plot.getRangeAxisEdge();

    Number yQ1 = bawDataset.getQ1Value(row, column);
    Number yQ3 = bawDataset.getQ3Value(row, column);
    Number yMax = bawDataset.getMaxRegularValue(row, column);
    Number yMin = bawDataset.getMinRegularValue(row, column);
    Shape box = null;
    if (yQ1 != null && yQ3 != null && yMax != null && yMin != null) {

        double yyQ1 = rangeAxis.valueToJava2D(yQ1.doubleValue(), dataArea, location);
        double yyQ3 = rangeAxis.valueToJava2D(yQ3.doubleValue(), dataArea, location);
        double yyMax = rangeAxis.valueToJava2D(yMax.doubleValue(), dataArea, location);
        double yyMin = rangeAxis.valueToJava2D(yMin.doubleValue(), dataArea, location);
        double xxmid = xx + state.getBarWidth() / 2.0;

        // draw the upper shadow...
        g2.draw(new Line2D.Double(xxmid, yyMax, xxmid, yyQ3));
        g2.draw(new Line2D.Double(xx, yyMax, xx + state.getBarWidth(), yyMax));

        // draw the lower shadow...
        g2.draw(new Line2D.Double(xxmid, yyMin, xxmid, yyQ1));
        g2.draw(new Line2D.Double(xx, yyMin, xx + state.getBarWidth(), yyMin));

        // draw the body...
        box = new Rectangle2D.Double(xx, Math.min(yyQ1, yyQ3), state.getBarWidth(), Math.abs(yyQ1 - yyQ3));
        if (getFillBox()) {
            g2.fill(box);
        }
        g2.draw(box);

    }

    g2.setPaint(getArtifactPaint());

    if (this.isDisplayMean()) {
        // draw mean - SPECIAL AIMS REQUIREMENT...
        Number yMean = bawDataset.getMeanValue(row, column);
        if (yMean != null) {
            yyAverage = rangeAxis.valueToJava2D(yMean.doubleValue(), dataArea, location);
            aRadius = state.getBarWidth() / 4;
            Ellipse2D.Double avgEllipse = new Ellipse2D.Double(xx + aRadius, yyAverage - aRadius, aRadius * 2,
                    aRadius * 2);
            g2.fill(avgEllipse);
            g2.draw(avgEllipse);
        }
    }

    if (this.isDisplayMedian()) {
        // draw median...
        Number yMedian = bawDataset.getMedianValue(row, column);
        if (yMedian != null) {
            double yyMedian = rangeAxis.valueToJava2D(yMedian.doubleValue(), dataArea, location);
            g2.draw(new Line2D.Double(xx, yyMedian, xx + state.getBarWidth(), yyMedian));
        }
    }

    // draw yOutliers...
    double maxAxisValue = rangeAxis.valueToJava2D(rangeAxis.getUpperBound(), dataArea, location) + aRadius;
    double minAxisValue = rangeAxis.valueToJava2D(rangeAxis.getLowerBound(), dataArea, location) - aRadius;

    g2.setPaint(p);

    if (this.isDisplayCoinCloud()) {
        //draw coin clouds
        drawCoinCloud(g2, state, dataArea, location, rangeAxis, xx, row, column, bawDataset);
    }
    //caIntegrator: oRadius is the radius of the outlier circles. It was used to be 3.
    // draw outliers
    double oRadius = state.getBarWidth() / this.outlierRadiusDenominator; // outlier radius
    List outliers = new ArrayList();
    OutlierListCollection outlierListCollection = new OutlierListCollection();

    List yOutliers = bawDataset.getOutliers(row, column);
    if (yOutliers != null) {
        for (int i = 0; i < yOutliers.size(); i++) {
            double outlier = ((Number) yOutliers.get(i)).doubleValue();
            Number minOutlier = bawDataset.getMinOutlier(row, column);
            Number maxOutlier = bawDataset.getMaxOutlier(row, column);
            Number minRegular = bawDataset.getMinRegularValue(row, column);
            Number maxRegular = bawDataset.getMaxRegularValue(row, column);
            if (outlier > maxOutlier.doubleValue()) {
                outlierListCollection.setHighFarOut(true);
            } else if (outlier < minOutlier.doubleValue()) {
                outlierListCollection.setLowFarOut(true);
            } else if (outlier > maxRegular.doubleValue()) {
                yyOutlier = rangeAxis.valueToJava2D(outlier, dataArea, location);
                outliers.add(new Outlier(xx + state.getBarWidth() / 2.0, yyOutlier, oRadius));
            } else if (outlier < minRegular.doubleValue()) {
                yyOutlier = rangeAxis.valueToJava2D(outlier, dataArea, location);
                outliers.add(new Outlier(xx + state.getBarWidth() / 2.0, yyOutlier, oRadius));
            }

            Collections.sort(outliers);
        }
        //display farouts as JFreeChart Implemetation
        if (!displayAllOutliers) {
            // Process outliers. Each outlier is either added to the 
            // appropriate outlier list or a new outlier list is made
            for (int i = 0; i < yOutliers.size(); i++) {
                Number minRegular = bawDataset.getMinRegularValue(row, column);
                Number maxRegular = bawDataset.getMaxRegularValue(row, column);
                double outlier = ((Number) yOutliers.get(i)).doubleValue();
                if (outlier < minRegular.doubleValue() || outlier > maxRegular.doubleValue()) {
                    yyOutlier = rangeAxis.valueToJava2D(outlier, dataArea, location);
                    outliers.add(new Outlier(xx + state.getBarWidth() / 2.0, yyOutlier, oRadius));
                }
            }

            for (Iterator iterator = outliers.iterator(); iterator.hasNext();) {
                Outlier outlier = (Outlier) iterator.next();
                outlierListCollection.add(outlier);
            }

            for (Iterator iterator = outlierListCollection.iterator(); iterator.hasNext();) {
                OutlierList list = (OutlierList) iterator.next();
                Outlier outlier = list.getAveragedOutlier();
                Point2D point = outlier.getPoint();

                if (list.isMultiple()) {
                    drawMultipleEllipse(point, state.getBarWidth(), oRadius, g2);
                } else {
                    drawEllipse(point, oRadius, g2);
                }
            }
            // draw farout indicators
            if (outlierListCollection.isHighFarOut()) {
                drawHighFarOut(aRadius / 2.0, g2, xx + state.getBarWidth() / 2.0, maxAxisValue);
            }

            if (outlierListCollection.isLowFarOut()) {
                drawLowFarOut(aRadius / 2.0, g2, xx + state.getBarWidth() / 2.0, minAxisValue);
            }
        } else {
            for (int i = 0; i < yOutliers.size(); i++) {
                Number minRegular = bawDataset.getMinRegularValue(row, column);
                Number maxRegular = bawDataset.getMaxRegularValue(row, column);
                double outlier = ((Number) yOutliers.get(i)).doubleValue();
                if (outlier < minRegular.doubleValue() || outlier > maxRegular.doubleValue()) {
                    yyOutlier = rangeAxis.valueToJava2D(outlier, dataArea, location);
                    outliers.add(new Outlier(xx + state.getBarWidth() / 2.0, yyOutlier, oRadius));
                }
            }
            Collections.sort(outliers);
            for (Iterator iterator = outliers.iterator(); iterator.hasNext();) {
                Outlier outlier = (Outlier) iterator.next();
                Point2D point = outlier.getPoint();

                drawEllipse(point, oRadius, g2);
            }
        }
    }
    // collect entity and tool tip information...
    if (state.getInfo() != null) {
        EntityCollection entities = state.getEntityCollection();
        if (entities != null) {
            String tip = null;
            CategoryToolTipGenerator tipster = getToolTipGenerator(row, column);
            if (tipster != null) {
                tip = tipster.generateToolTip(dataset, row, column);
            }
            String url = null;
            if (getItemURLGenerator(row, column) != null) {
                url = getItemURLGenerator(row, column).generateURL(dataset, row, column);
            }
            CategoryItemEntity entity = new CategoryItemEntity(box, tip, url, dataset, row,
                    dataset.getColumnKey(column), column);
            entities.add(entity);
        }
    }

}

From source file:gov.nih.nci.caintegrator.application.graphing.BoxAndWhiskerDotsRenderer.java

/**
 * Draws the visual representation of a single data item when the plot has 
 * a vertical orientation./*from w ww  . j av  a  2  s  . c  o m*/
 *
 * @param g2  the graphics device.
 * @param state  the renderer state.
 * @param dataArea  the area within which the plot is being drawn.
 * @param plot  the plot (can be used to obtain standard color information 
 *              etc).
 * @param domainAxis  the domain axis.
 * @param rangeAxis  the range axis.
 * @param dataset  the dataset.
 * @param row  the row index (zero-based).
 * @param column  the column index (zero-based).
 */
public void drawVerticalItem(Graphics2D g2, CategoryItemRendererState state, Rectangle2D dataArea,
        CategoryPlot plot, CategoryAxis domainAxis, ValueAxis rangeAxis, CategoryDataset dataset, int row,
        int column) {

    BoxAndWhiskerCategoryDataset bawDataset = (BoxAndWhiskerCategoryDataset) dataset;

    double categoryEnd = domainAxis.getCategoryEnd(column, getColumnCount(), dataArea,
            plot.getDomainAxisEdge());
    double categoryStart = domainAxis.getCategoryStart(column, getColumnCount(), dataArea,
            plot.getDomainAxisEdge());

    double categoryWidth = (categoryEnd - categoryStart);

    double xx = categoryStart;
    int seriesCount = getRowCount();
    int categoryCount = getColumnCount();

    if (seriesCount > 1) {
        double seriesGap = dataArea.getWidth() * getItemMargin() / (categoryCount * (seriesCount - 1));
        double usedWidth = (state.getBarWidth() * seriesCount) + (seriesGap * (seriesCount - 1));
        // offset the start of the boxes if the total width used is smaller
        // than the category width
        double offset = (categoryWidth - usedWidth) / 2;
        xx = xx + offset + (row * (state.getBarWidth() + seriesGap));
    } else {
        // offset the start of the box if the box width is smaller than the 
        // category width
        double offset = (categoryWidth - state.getBarWidth()) / 2;
        xx = xx + offset;
    }

    double yyAverage = 0.0;
    double yyOutlier;

    //bar colors are determined by the Paint p obtained here in a rotational
    //manner (from a Color array).  By switching the column and raw values,
    //you can get a different color pattern for the bar:  In the method 
    //getItemPaint(), only the first argument counts for the color. The original
    //code Paint p = getItemPaint(row, column); is commented out for a difference.
    //Paint p = getItemPaint(row, column);
    Paint p = getItemPaint(column, row); // <-- this is wrong, dont know who put this here
    // Paint p = PaintUtilities.stringToColor("red"); // coin plot should all be one color
    if (p != null) {
        g2.setPaint(p);
    }
    Stroke s = getItemStroke(row, column);
    g2.setStroke(s);

    double aRadius = 0; // average radius

    RectangleEdge location = plot.getRangeAxisEdge();

    Number yQ1 = bawDataset.getQ1Value(row, column);
    Number yQ3 = bawDataset.getQ3Value(row, column);
    Number yMax = bawDataset.getMaxRegularValue(row, column);
    Number yMin = bawDataset.getMinRegularValue(row, column);
    Shape box = null;
    if (yQ1 != null && yQ3 != null && yMax != null && yMin != null) {

        double yyQ1 = rangeAxis.valueToJava2D(yQ1.doubleValue(), dataArea, location);
        double yyQ3 = rangeAxis.valueToJava2D(yQ3.doubleValue(), dataArea, location);
        double yyMax = rangeAxis.valueToJava2D(yMax.doubleValue(), dataArea, location);
        double yyMin = rangeAxis.valueToJava2D(yMin.doubleValue(), dataArea, location);
        double xxmid = xx + state.getBarWidth() / 2.0;

        // draw the upper shadow...
        g2.draw(new Line2D.Double(xxmid, yyMax, xxmid, yyQ3));
        g2.draw(new Line2D.Double(xx, yyMax, xx + state.getBarWidth(), yyMax));

        // draw the lower shadow...
        g2.draw(new Line2D.Double(xxmid, yyMin, xxmid, yyQ1));
        g2.draw(new Line2D.Double(xx, yyMin, xx + state.getBarWidth(), yyMin));

        // draw the body...
        box = new Rectangle2D.Double(xx, Math.min(yyQ1, yyQ3), state.getBarWidth(), Math.abs(yyQ1 - yyQ3));
        if (this.fillBox) {
            g2.fill(box);
        }
        //The following draw the boxes where mean and media are located.
        g2.draw(box);

    }

    g2.setPaint(this.artifactPaint);

    // draw median...
    Number yMedian = bawDataset.getMedianValue(row, column);
    if (yMedian != null) {
        double yyMedian = rangeAxis.valueToJava2D(yMedian.doubleValue(), dataArea, location);
        g2.draw(new Line2D.Double(xx, yyMedian, xx + state.getBarWidth(), yyMedian));
    }

    //caIntegrator:  The outLiner is no longer needed to be here.
    // draw the rawData around the box...
    /////////////////////////////////caIntegrator: Begin of drawing dots around the box
    double maxAxisValue = rangeAxis.valueToJava2D(rangeAxis.getUpperBound(), dataArea, location) + aRadius;
    double minAxisValue = rangeAxis.valueToJava2D(rangeAxis.getLowerBound(), dataArea, location) - aRadius;

    g2.setPaint(p);

    //caIntegrator: oRadius is the radius of the outlier circles. It was used to be 3.
    double oRadius = state.getBarWidth() / 10; // outlier radius

    List outliers = new ArrayList();

    //Get the raw item data for a given row/column pair for plotting.
    //getRawItemData() method is added to bawDataset object for 
    //this purpose.

    //List yOutliers = bawDataset.getRawItemData(row, column);
    List yOutliers = this.caintegOutliers.get(String.valueOf(row) + "_" + String.valueOf(column));

    if (yOutliers != null) {
        for (int i = 0; i < yOutliers.size(); i++) {
            double outlier = ((Number) yOutliers.get(i)).doubleValue();
            yyOutlier = rangeAxis.valueToJava2D(outlier, dataArea, location);
            outliers.add(new Outlier(xx + state.getBarWidth() / 2.0, yyOutlier, oRadius));

            Collections.sort(outliers);
        }

        //Sort the raw data according to its Y axis first as groups.
        //Grouping of these raw data is based on a single standard:
        //if any number of data, when plotted on a vertical line, overlap
        //with one another, they belong to the same group. In this case, 
        //the grouping is largely determined by the diameter of the dot, that
        //represents each raw data.
        boolean firstOutlier = true;
        double topY = 0;
        double bottomY = 0;
        List groupList = new ArrayList();
        List tempList = null;
        double diameter = 2 * oRadius;

        double difference = 0;
        for (Iterator iterator = outliers.iterator(); iterator.hasNext();) {

            Outlier outlier = (Outlier) iterator.next();

            //Set the smallest outlier as the base bottom line
            if (firstOutlier) {
                firstOutlier = false;
                bottomY = outlier.getY();
                tempList = new ArrayList();
                tempList.add(outlier);
                continue;
            }

            topY = outlier.getY();

            //If this one and the one before it is overlapping,
            //Then put them in the same group, so we can spread them
            //horizontally
            difference = topY - bottomY;

            if (difference < diameter) {
                tempList.add(outlier);
            }
            //They do not overlap, they belong to the different groups.
            else {
                bottomY = topY;
                groupList.add(tempList);
                tempList = new ArrayList();
                tempList.add(outlier);
            }
        }

        //caIntegrator - x axis cloud
        //Process each outlier's x coordinates  
        boolean isOdd = true;
        double offSet = 0;
        int listSize = 0;

        for (int m = 0; m < groupList.size(); m++) {
            List list = (List) groupList.get(m);
            if (list != null && list.size() > 1) {
                listSize = list.size();
                isOdd = (listSize % 2 == 1) ? true : false;

                if (isOdd) {
                    offSet = diameter * (listSize / 2);
                } else {
                    offSet = diameter * (listSize / 2) - oRadius;
                }

                Random r = new Random();
                offSet = (Math.abs(r.nextInt()) % 3) * 3;
                offSet = 0;

                for (int n = 0; n < list.size(); n++) {
                    Outlier outlier = (Outlier) list.get(n);

                    outlier.setPoint(new Point2D.Double(outlier.getX() - offSet, outlier.getY()));
                    offSet = offSet - diameter;
                    r = new Random();
                    int randInt = Math.abs(r.nextInt()) % 3;
                    offSet = randInt * 2;
                }
            }
        }

        //Draw these dots on the graph.         
        for (Iterator iterator = groupList.iterator(); iterator.hasNext();) {

            List list = (List) iterator.next();
            for (int i = 0; i < list.size(); i++) {
                Outlier outlier = (Outlier) list.get(i);
                Point2D point = outlier.getPoint();
                drawEllipse(point, oRadius, g2);
            }
        }
    }
}

From source file:extern.AsymmetricStatisticalBarRenderer.java

/**
 * Draws an item for a plot with a horizontal orientation.
 *
 * @param g2  the graphics device.//from   ww  w.j a v  a2s .  co  m
 * @param state  the renderer state.
 * @param dataArea  the data area.
 * @param plot  the plot.
 * @param domainAxis  the domain axis.
 * @param rangeAxis  the range axis.
 * @param dataset  the data.
 * @param visibleRow  the visible row index.
 * @param row  the row index (zero-based).
 * @param column  the column index (zero-based).
 */
protected void drawHorizontalItem(Graphics2D g2, CategoryItemRendererState state, Rectangle2D dataArea,
        CategoryPlot plot, CategoryAxis domainAxis, ValueAxis rangeAxis,
        AsymmetricStatisticalCategoryDataset dataset, int visibleRow, int row, int column) {

    RectangleEdge xAxisLocation = plot.getDomainAxisEdge();

    // BAR Y
    double rectY = domainAxis.getCategoryStart(column, getColumnCount(), dataArea, xAxisLocation);

    int seriesCount = state.getVisibleSeriesCount() >= 0 ? state.getVisibleSeriesCount() : getRowCount();
    int categoryCount = getColumnCount();
    if (seriesCount > 1) {
        double seriesGap = dataArea.getHeight() * getItemMargin() / (categoryCount * (seriesCount - 1));
        rectY = rectY + visibleRow * (state.getBarWidth() + seriesGap);
    } else {
        rectY = rectY + visibleRow * state.getBarWidth();
    }

    // BAR X
    Number meanValue = dataset.getMeanValue(row, column);
    if (meanValue == null) {
        return;
    }
    double value = meanValue.doubleValue();
    double base = 0.0;
    double lclip = getLowerClip();
    double uclip = getUpperClip();

    if (uclip <= 0.0) { // cases 1, 2, 3 and 4
        if (value >= uclip) {
            return; // bar is not visible
        }
        base = uclip;
        if (value <= lclip) {
            value = lclip;
        }
    } else if (lclip <= 0.0) { // cases 5, 6, 7 and 8
        if (value >= uclip) {
            value = uclip;
        } else {
            if (value <= lclip) {
                value = lclip;
            }
        }
    } else { // cases 9, 10, 11 and 12
        if (value <= lclip) {
            return; // bar is not visible
        }
        base = getLowerClip();
        if (value >= uclip) {
            value = uclip;
        }
    }

    RectangleEdge yAxisLocation = plot.getRangeAxisEdge();
    double transY1 = rangeAxis.valueToJava2D(base, dataArea, yAxisLocation);
    double transY2 = rangeAxis.valueToJava2D(value, dataArea, yAxisLocation);
    double rectX = Math.min(transY2, transY1);

    double rectHeight = state.getBarWidth();
    double rectWidth = Math.abs(transY2 - transY1);

    Rectangle2D bar = new Rectangle2D.Double(rectX, rectY, rectWidth, rectHeight);
    Paint itemPaint = getItemPaint(row, column);
    GradientPaintTransformer t = getGradientPaintTransformer();
    if (t != null && itemPaint instanceof GradientPaint) {
        itemPaint = t.transform((GradientPaint) itemPaint, bar);
    }
    g2.setPaint(itemPaint);
    g2.fill(bar);

    // draw the outline...
    if (isDrawBarOutline() && state.getBarWidth() > BAR_OUTLINE_WIDTH_THRESHOLD) {
        Stroke stroke = getItemOutlineStroke(row, column);
        Paint paint = getItemOutlinePaint(row, column);
        if (stroke != null && paint != null) {
            g2.setStroke(stroke);
            g2.setPaint(paint);
            g2.draw(bar);
        }
    }

    // CI lines
    Number n = dataset.getUpperValue(row, column);
    Number m = dataset.getLowerValue(row, column);

    if (n != null && m != null) {
        double valueUpperDelta = n.doubleValue();
        double valueLowerDelta = m.doubleValue();

        double highVal = rangeAxis.valueToJava2D(valueUpperDelta, dataArea, yAxisLocation);
        double lowVal = rangeAxis.valueToJava2D(valueLowerDelta, dataArea, yAxisLocation);

        if (this.errorIndicatorPaint != null) {
            g2.setPaint(this.errorIndicatorPaint);
        } else {
            g2.setPaint(getItemOutlinePaint(row, column));
        }
        if (this.errorIndicatorStroke != null) {
            g2.setStroke(this.errorIndicatorStroke);
        } else {
            g2.setStroke(getItemOutlineStroke(row, column));
        }
        Line2D line = null;
        line = new Line2D.Double(lowVal, rectY + rectHeight / 2.0d, highVal, rectY + rectHeight / 2.0d);
        g2.draw(line);
        line = new Line2D.Double(highVal, rectY + rectHeight * 0.25, highVal, rectY + rectHeight * 0.75);
        g2.draw(line);
        line = new Line2D.Double(lowVal, rectY + rectHeight * 0.25, lowVal, rectY + rectHeight * 0.75);
        g2.draw(line);
    }

    CategoryItemLabelGenerator generator = getItemLabelGenerator(row, column);
    if (generator != null && isItemLabelVisible(row, column)) {
        drawItemLabel(g2, dataset, row, column, plot, generator, bar, (value < 0.0));
    }

    // add an item entity, if this information is being collected
    EntityCollection entities = state.getEntityCollection();
    if (entities != null) {
        addItemEntity(entities, dataset, row, column, bar);
    }

}