List of usage examples for com.vaadin.ui Label setStyleName
@Override
public void setStyleName(String style)
From source file:probe.com.view.body.quantdatasetsoverview.diseasegroupsfilters.ComparisonsSelectionOverviewBubbleChart.java
public ComparisonsSelectionOverviewBubbleChart(final QuantCentralManager Quant_Central_Manager, final CSFPRHandler CSFPR_Handler, int chartWidth, int chartHeight, Set<QuantDiseaseGroupsComparison> selectedComparisonList, List<QuantProtein> searchQuantificationProtList, QuantDiseaseGroupsComparison userCustomizedComparison) { this.userCustomizedComparison = userCustomizedComparison; userDataCounter = 1;/*from ww w. ja v a2s . co m*/ this.searchQuantificationProtList = searchQuantificationProtList; Map<String, String> diseaseHashedColorMap = Quant_Central_Manager.getDiseaseHashedColorMap(); for (String str : diseaseHashedColorMap.keySet()) { diseaseColorMap.put(str, Color.decode(diseaseHashedColorMap.get(str))); } this.width = chartWidth; this.height = 600; this.CSFPR_Handler = CSFPR_Handler; this.setWidth(width + "px"); this.setHeightUndefined(); this.Quant_Central_Manager = Quant_Central_Manager; this.Quant_Central_Manager.registerStudySelectionListener(ComparisonsSelectionOverviewBubbleChart.this); this.setSpacing(true); //init toplayout topLayout.setHeight(30 + "px"); topLayout.setSpacing(true); topLayout.setMargin(new MarginInfo(false, false, true, false)); this.addComponent(topLayout); Label overviewLabel = new Label("<font style='margin-left :50px;'>Overview</font> "); overviewLabel.setContentMode(ContentMode.HTML); topLayout.addComponent(overviewLabel); overviewLabel.setStyleName("subtitle"); overviewLabel.setWidth("120px"); InfoPopupBtn info = new InfoPopupBtn( "The bubble chart give an overview for the proteins existed in the selected comparisons.<br/>The diameter of the bubble represents the number of the proteins in the selected comparison and the color represents the trend<br/>"); info.setWidth("16px"); info.setHeight("16px"); topLayout.addComponent(info); //end of toplayout //init chartlayout this.chartLayoutContainer.setVisible(false); this.addComponent(chartLayoutContainer); this.addComponent(chartLayoutContainer); chartLayoutContainer.setWidth(width + "px"); chartLayoutContainer.setHeight(height + "px"); chartLayoutContainer.addComponent(chartImage, "left: " + 0 + "px; top: " + 0 + "px;"); chartLayoutContainer.addComponent(chartLayout, "left: " + 0 + "px; top: " + 0 + "px;"); chartLayout.setWidth(width + "px"); chartLayout.setHeight(height + "px"); chartLayout.addLayoutClickListener(ComparisonsSelectionOverviewBubbleChart.this); //end of chartlayout //init bottomlayout bottomLayout.setWidth("100%"); this.addComponent(bottomLayout); this.setComponentAlignment(bottomLayout, Alignment.BOTTOM_RIGHT); bottomLayout.setVisible(false); HorizontalLayout btnContainerLayout = new HorizontalLayout(); btnContainerLayout.setSpacing(true); // btnContainerLayout.setMargin(new MarginInfo(false, false, false, false)); btnContainerLayout.setWidthUndefined(); btnContainerLayout.setHeightUndefined(); // btnContainerLayout.addStyleName("leftspacer"); bottomLayout.addComponent(btnContainerLayout); bottomLayout.setComponentAlignment(btnContainerLayout, Alignment.TOP_RIGHT); TrendLegend legendLayout = new TrendLegend("bubblechart"); legendLayout.setWidthUndefined(); legendLayout.setHeight("24px"); btnContainerLayout.addComponent(legendLayout); btnContainerLayout.setComponentAlignment(legendLayout, Alignment.TOP_RIGHT); Quant_Central_Manager.insertNoftfication("Quantitative Datasets", "Remeber you can flip the disease group comparisons using (Swich disease groups button)<img src='VAADIN/themes/dario-theme/img/flip-v-updated.png' height='25px' width='25' alt='Reorder and select' Align='center'/> ", width, width, "flipnotification"); // btnContainerLayout.setExpandRatio(legendLayout, 600); // btnContainerLayout.setExpandRatio(btnContainerLayout, 210); // VerticalLayout stableBtnWrapper = new VerticalLayout(); //// stableBtnWrapper.setWidth("64px"); // HorizontalLayout stableBtn = new HorizontalLayout(); // stableBtnWrapper.addComponent(stableBtn); // stableBtnWrapper.setComponentAlignment(stableBtn, Alignment.TOP_LEFT); // btnContainerLayout.addComponent(stableBtnWrapper); groupSwichBtn = new GroupSwichBtn(Quant_Central_Manager, searchQuantificationProtList); btnContainerLayout.addComponent(groupSwichBtn); final VerticalLayout appliedIcon = new VerticalLayout(); appliedIcon.setStyleName("appliedicon"); appliedIcon.setWidth("24px"); appliedIcon.setHeight("24px"); appliedIcon.setDescription("Hide stable proteins"); btnContainerLayout.addComponent(appliedIcon); // stableBtn.setStyleName("stablebtn"); // stableBtn.setHeight("24px"); // Label stableLabel = new Label("Equal"); // stableLabel.setWidth("44px"); // stableBtn.addComponent(stableLabel); appliedIcon.addLayoutClickListener(new LayoutEvents.LayoutClickListener() { @Override public void layoutClick(LayoutEvents.LayoutClickEvent event) { if (appliedIcon.getStyleName().equalsIgnoreCase("appliedicon")) { appliedIcon.setStyleName("unappliedicon"); Quant_Central_Manager.updateSignificantOnlySelection(true); appliedIcon.setDescription("Show stable proteins"); } else { appliedIcon.setStyleName("appliedicon"); Quant_Central_Manager.updateSignificantOnlySelection(false); appliedIcon.setDescription("Hide stable proteins"); } } }); exportPdfBtn = new Button(""); exportPdfBtn.setWidth("24px"); exportPdfBtn.setHeight("24px"); exportPdfBtn.setPrimaryStyleName("exportpdfbtn"); exportPdfBtn.setDescription("Export chart image"); StreamResource myResource = createResource(); FileDownloader fileDownloader = new FileDownloader(myResource); fileDownloader.extend(exportPdfBtn); btnContainerLayout.addComponent(exportPdfBtn); VerticalLayout unselectAllBtn = new VerticalLayout(); unselectAllBtn.setStyleName("unselectallbtn"); btnContainerLayout.addComponent(unselectAllBtn); btnContainerLayout.setComponentAlignment(unselectAllBtn, Alignment.TOP_LEFT); unselectAllBtn.setDescription("Clear selection"); unselectAllBtn.addLayoutClickListener(new LayoutEvents.LayoutClickListener() { @Override public void layoutClick(LayoutEvents.LayoutClickEvent event) { Quant_Central_Manager.setBubbleChartQuantProteinsSelection(new HashSet<String>(), ""); resetChart(); } }); final VerticalLayout selectMultiBtn = new VerticalLayout(); selectMultiBtn.setStyleName("selectmultiselectedbtn"); btnContainerLayout.addComponent(selectMultiBtn); btnContainerLayout.setComponentAlignment(selectMultiBtn, Alignment.TOP_LEFT); selectMultiBtn.setDescription("Multiple selection"); activeMultiSelect = true; selectMultiBtn.addLayoutClickListener(new LayoutEvents.LayoutClickListener() { @Override public void layoutClick(LayoutEvents.LayoutClickEvent event) { if (selectMultiBtn.getStyleName().equalsIgnoreCase("selectmultiselectedbtn")) { selectMultiBtn.setStyleName("selectmultibtn"); activeMultiSelect = false; } else { selectMultiBtn.setStyleName("selectmultiselectedbtn"); activeMultiSelect = true; } } }); //end of btns layout //init empty layout emptySelectionLayout = new VerticalLayout(); this.addComponent(emptySelectionLayout); emptySelectionLayout.setWidth(width + "px"); emptySelectionLayout.setHeightUndefined(); VerticalLayout spacer = new VerticalLayout(); spacer.setHeight("100px"); spacer.setWidth("10px"); spacer.setStyleName(Reindeer.LAYOUT_WHITE); emptySelectionLayout.addComponent(spacer); emptySelectionLayout.setComponentAlignment(spacer, Alignment.BOTTOM_RIGHT); Label startLabel = new Label( "<center><h2 style='color:gray;'><b>Select comparison from the table</b></h2></center>"); startLabel.setContentMode(ContentMode.HTML); emptySelectionLayout.addComponent(startLabel); emptySelectionLayout.setComponentAlignment(startLabel, Alignment.MIDDLE_CENTER); Image handleft = new Image(); handleft.setSource(new ThemeResource("img/handleft.png")); emptySelectionLayout.addComponent(handleft); emptySelectionLayout.setComponentAlignment(handleft, Alignment.MIDDLE_CENTER); }
From source file:probe.com.view.body.quantdatasetsoverview.diseasegroupsfilters.PopupRecombineDiseaseGroups.java
private void initPopupLayout() { int h = 0;//(default_DiseaseCat_DiseaseGroupMap.size() * 33) + 300; for (Map<String, String> m : default_DiseaseCat_DiseaseGroupMap.values()) { if (h < m.size()) { h = m.size();//from ww w . ja v a 2s.co m } } h = (h * 26) + 200; int w = 700; if (Page.getCurrent().getBrowserWindowHeight() - 280 < h) { h = Page.getCurrent().getBrowserWindowHeight() - 280; } if (Page.getCurrent().getBrowserWindowWidth() < w) { w = Page.getCurrent().getBrowserWindowWidth(); } popupWindow.setWidth(w + "px"); popupWindow.setHeight(h + "px"); popupBodyLayout.setWidth((w - 50) + "px"); Set<String> diseaseSet = Quant_Central_Manager.getDiseaseCategorySet(); diseaseTypeSelectionList.setDescription("Select disease category"); for (String disease : diseaseSet) { diseaseTypeSelectionList.addItem(disease); diseaseTypeSelectionList.setItemCaption(disease, (disease)); } HorizontalLayout diseaseCategorySelectLayout = new HorizontalLayout(); diseaseCategorySelectLayout.setWidthUndefined(); diseaseCategorySelectLayout.setHeight("50px"); diseaseCategorySelectLayout.setSpacing(true); diseaseCategorySelectLayout.setMargin(true); popupBodyLayout.addComponent(diseaseCategorySelectLayout); popupBodyLayout.setComponentAlignment(diseaseCategorySelectLayout, Alignment.TOP_LEFT); Label title = new Label("Disease Category"); title.setStyleName(Reindeer.LABEL_SMALL); diseaseCategorySelectLayout.addComponent(title); diseaseCategorySelectLayout.setComponentAlignment(title, Alignment.BOTTOM_CENTER); diseaseTypeSelectionList.setWidth("200px"); diseaseTypeSelectionList.setNullSelectionAllowed(false); diseaseTypeSelectionList.setValue("All"); diseaseTypeSelectionList.setImmediate(true); diseaseCategorySelectLayout.addComponent(diseaseTypeSelectionList); diseaseCategorySelectLayout.setComponentAlignment(diseaseTypeSelectionList, Alignment.TOP_LEFT); diseaseTypeSelectionList.setStyleName("diseaseselectionlist"); diseaseTypeSelectionList.addValueChangeListener(new Property.ValueChangeListener() { @Override public void valueChange(Property.ValueChangeEvent event) { boolean showAll = false; String value = event.getProperty().getValue().toString(); if (value.equalsIgnoreCase("All")) { showAll = true; } for (String dName : diseaseGroupsGridLayoutMap.keySet()) { if (dName.equalsIgnoreCase(value) || showAll) { diseaseGroupsGridLayoutMap.get(dName).setVisible(true); } else { diseaseGroupsGridLayoutMap.get(dName).setVisible(false); } } } }); VerticalLayout diseaseGroupsNamesContainer = new VerticalLayout(); diseaseGroupsNamesContainer.setWidth("100%"); diseaseGroupsNamesContainer.setHeightUndefined(); popupBodyLayout.addComponent(diseaseGroupsNamesContainer); diseaseGroupsNamesContainer.setStyleName(Reindeer.LAYOUT_WHITE); GridLayout diseaseNamesHeader = new GridLayout(2, 1); diseaseNamesHeader.setWidth("100%"); diseaseNamesHeader.setHeightUndefined(); diseaseNamesHeader.setSpacing(true); diseaseNamesHeader.setMargin(new MarginInfo(true, false, true, false)); diseaseGroupsNamesContainer.addComponent(diseaseNamesHeader); Label col1Label = new Label("Group Name"); diseaseNamesHeader.addComponent(col1Label, 0, 0); col1Label.setStyleName(Reindeer.LABEL_SMALL); Label col2Label = new Label("Suggested Name"); diseaseNamesHeader.addComponent(col2Label, 1, 0); col2Label.setStyleName(Reindeer.LABEL_SMALL); Panel diseaseGroupsNamesFrame = new Panel(); diseaseGroupsNamesFrame.setWidth("100%"); diseaseGroupsNamesFrame.setHeight((h - 200) + "px"); diseaseGroupsNamesContainer.addComponent(diseaseGroupsNamesFrame); diseaseGroupsNamesFrame.setStyleName(Reindeer.PANEL_LIGHT); VerticalLayout diseaseNamesUpdateContainerLayout = new VerticalLayout(); for (String diseaseCategory : diseaseSet) { if (diseaseCategory.equalsIgnoreCase("All")) { continue; } HorizontalLayout diseaseNamesUpdateContainer = initDiseaseNamesUpdateContainer(diseaseCategory); diseaseNamesUpdateContainerLayout.addComponent(diseaseNamesUpdateContainer); diseaseGroupsGridLayoutMap.put(diseaseCategory, diseaseNamesUpdateContainer); } diseaseGroupsNamesFrame.setContent(diseaseNamesUpdateContainerLayout); HorizontalLayout btnLayout = new HorizontalLayout(); btnLayout.setMargin(true); btnLayout.setSpacing(true); Button resetFiltersBtn = new Button("Reset"); resetFiltersBtn.setPrimaryStyleName("resetbtn"); btnLayout.addComponent(resetFiltersBtn); resetFiltersBtn.setWidth("50px"); resetFiltersBtn.setHeight("24px"); resetFiltersBtn.setDescription("Reset group names to default"); resetFiltersBtn.addClickListener(new Button.ClickListener() { @Override public void buttonClick(Button.ClickEvent event) { resetToDefault(); } }); Button resetToOriginalBtn = new Button("Publications Names"); resetToOriginalBtn.setPrimaryStyleName("resetbtn"); btnLayout.addComponent(resetToOriginalBtn); resetToOriginalBtn.setWidth("150px"); resetToOriginalBtn.setHeight("24px"); resetToOriginalBtn.setDescription("Reset group names to original publication names"); resetToOriginalBtn.addClickListener(new Button.ClickListener() { @Override public void buttonClick(Button.ClickEvent event) { resetToPublicationsNames(); } }); Button applyFilters = new Button("Update"); applyFilters.setDescription("Update disease groups with the selected names"); applyFilters.setPrimaryStyleName("resetbtn"); applyFilters.setWidth("50px"); applyFilters.setHeight("24px"); btnLayout.addComponent(applyFilters); applyFilters.addClickListener(new Button.ClickListener() { @Override public void buttonClick(Button.ClickEvent event) { updateGroups(); } }); popupBodyLayout.addComponent(btnLayout); popupBodyLayout.setComponentAlignment(btnLayout, Alignment.MIDDLE_RIGHT); resetToDefault(); }
From source file:probe.com.view.body.quantdatasetsoverview.diseasegroupsfilters.popupreordergroups.SortableLayoutContainer.java
public SortableLayoutContainer(int w, int subH, final String strTitle, Set<String> labels, Map<String, String> diseaseStyleMap) { this.diseaseStyleMap = diseaseStyleMap; this.setStyleName(Reindeer.LAYOUT_WHITE); this.setSpacing(true); this.strTitle = strTitle; this.groupSelectionMap = new HashMap<String, Boolean>(); this.selectionSet = new LinkedHashSet<String>(); // this.fullSelectionSet = new LinkedHashSet<String>(); HorizontalLayout headerLayoutI = new HorizontalLayout(); Label titileI = new Label(strTitle); titileI.setStyleName("custLabel"); headerLayoutI.addComponent(titileI); this.addComponent(headerLayoutI); int containerWidth = ((w) / 2) - 20; this.setWidth(containerWidth + "px"); int height = subH - 15; headerLayoutI.setWidth(containerWidth + "px"); clearBtn = new Button("Clear"); clearBtn.setStyleName(Reindeer.BUTTON_LINK); clearBtn.setWidth("40px"); clearBtn.setHeight("18px"); clearBtn.setEnabled(false);/*from w ww .j a v a 2 s .c om*/ headerLayoutI.addComponent(clearBtn); headerLayoutI.setComponentAlignment(clearBtn, Alignment.TOP_RIGHT); clearBtn.addClickListener(new Button.ClickListener() { @Override public void buttonClick(Button.ClickEvent event) { // autoClear = true; singleSelected = false; diseaseGroupSelectOption.setValue(null); } }); Panel bodyPanel = new Panel(); HorizontalLayout bodyLayout = new HorizontalLayout(); bodyLayout.setStyleName(Reindeer.LAYOUT_WHITE); bodyPanel.setContent(bodyLayout); this.addComponent(bodyPanel); bodyPanel.setHeight(subH + "px"); bodyPanel.setWidth((containerWidth) + "px"); counterLayoutContainer = new VerticalLayout(); bodyLayout.addComponent(counterLayoutContainer); counterLayoutContainer.setHeight(height + "px"); counterLayoutContainer.setWidth("30px"); counterLayoutContainer.setStyleName(Reindeer.LAYOUT_WHITE); counterLayout = new VerticalLayout(); counterLayoutContainer.addComponent(counterLayout); counterLayout.setWidth("30px"); counterLayout.setSpacing(false); counterLayout.setStyleName("countcontainer"); int sortableItremWidth = containerWidth - 26 - 6 - 15; sortableDiseaseGroupLayout = new SortableLayout(); bodyLayout.addComponent(sortableDiseaseGroupLayout); sortableDiseaseGroupLayout.setWidth(sortableItremWidth + "px"); sortableDiseaseGroupLayout.setData(strTitle); sortableDiseaseGroupLayout.addStyleName("no-horizontal-drag-hints"); checkboxLayout = new VerticalLayout(); bodyLayout.addComponent(checkboxLayout); checkboxLayout.setSpacing(false); checkboxLayout.setEnabled(false); checkboxLayout.setHeight(height + "px"); checkboxLayout.setStyleName("countcontainer"); checkboxLayout.setMargin(new MarginInfo(false, false, false, false)); diseaseGroupSelectOption = new OptionGroup(); checkboxLayout.addComponent(diseaseGroupSelectOption); checkboxLayout.setComponentAlignment(diseaseGroupSelectOption, Alignment.TOP_LEFT); // diseaseGroupSelectOption.setWidth("20px"); diseaseGroupSelectOption.setNullSelectionAllowed(true); // user can not 'unselect' diseaseGroupSelectOption.setMultiSelect(true); diseaseGroupSelectOption.addStyleName("sortablelayoutselect"); diseaseGroupSelectOption.addValueChangeListener(new Property.ValueChangeListener() { @Override public void valueChange(Property.ValueChangeEvent event) { if (autoClear) { autoClear = false; return; } for (String key : groupSelectionMap.keySet()) { groupSelectionMap.put(key, Boolean.FALSE); } getSelectionSet().clear(); singleSelected = false; int counter = 0; for (Object key : ((Set) diseaseGroupSelectOption.getValue())) { if (((Integer) key) >= groupsIds.size()) { continue; } groupSelectionMap.put(groupsIds.get((Integer) key), Boolean.TRUE); singleSelected = true; counter++; getSelectionSet().add(groupsIds.get((Integer) key)); } if (counter == groupsIds.size()) { singleSelected = false; } } }); itemWidth = sortableItremWidth - 10; initLists(labels); }
From source file:probe.com.view.body.quantdatasetsoverview.quantproteinstabsheet.peptidescontainer.popupcomponents.PeptideSequenceContainer.java
private void addTerminalLabels(int top, int width) { VerticalLayout nTerminalEdge = new VerticalLayout(); nTerminalEdge.setWidth("19px"); nTerminalEdge.setHeight("15px"); nTerminalEdge.setStyleName("terminal"); Label nLabel = new Label("N"); nLabel.setWidth("10px"); nLabel.setStyleName("ntermlayout"); nTerminalEdge.addComponent(nLabel);// w w w .java2s .c o m this.addComponent(nTerminalEdge, "left: " + (0) + "px; top: " + (top) + "px;"); VerticalLayout cTerminalEdge = new VerticalLayout(); cTerminalEdge.setWidth("20px"); cTerminalEdge.setHeight("15px"); cTerminalEdge.setStyleName("terminal"); Label cLabel = new Label("C"); cLabel.setStyleName("ctermlayout"); cTerminalEdge.addComponent(cLabel); cLabel.setWidth("10px"); cTerminalEdge.setComponentAlignment(cLabel, Alignment.TOP_RIGHT); this.addComponent(cTerminalEdge, "left: " + (width - 21) + "px; top: " + (top) + "px;"); }
From source file:probe.com.view.body.quantdatasetsoverview.quantproteinstabsheet.studies.PeptidesComparisonsSequenceLayout.java
/** * * @param cp// ww w . java 2s .c om * @param width * @param Quant_Central_Manager */ public PeptidesComparisonsSequenceLayout(QuantCentralManager Quant_Central_Manager, final DiseaseGroupsComparisonsProteinLayout cp, int width) { this.studiesMap = new LinkedHashMap<String, StudyInfoData>(); this.setColumns(4); this.setRows(3); this.setWidthUndefined(); this.setSpacing(true); this.setMargin(new MarginInfo(true, false, false, false)); comparisonTitle = new Label(); comparisonTitle.setContentMode(ContentMode.HTML); comparisonTitle.setStyleName("custChartLabelHeader"); comparisonTitle.setWidth((width - 55) + "px"); this.addComponent(comparisonTitle, 1, 0); this.setComponentAlignment(comparisonTitle, Alignment.TOP_LEFT); closeBtn = new VerticalLayout(); closeBtn.setWidth("20px"); closeBtn.setHeight("20px"); closeBtn.setStyleName("closebtn"); this.addComponent(closeBtn, 2, 0); this.setComponentAlignment(closeBtn, Alignment.TOP_RIGHT); //end of toplayout //init comparison study layout GridLayout proteinSequenceComparisonsContainer = new GridLayout(2, cp.getComparison().getDatasetIndexes().length); proteinSequenceComparisonsContainer.setWidthUndefined(); proteinSequenceComparisonsContainer.setHeightUndefined(); proteinSequenceComparisonsContainer.setStyleName(Reindeer.LAYOUT_WHITE); proteinSequenceComparisonsContainer.setSpacing(true); proteinSequenceComparisonsContainer.setMargin(new MarginInfo(true, false, false, false)); this.addComponent(proteinSequenceComparisonsContainer, 1, 1); coverageWidth = (width - 100 - 180); Map<Integer, Set<QuantPeptide>> dsQuantPepMap = new HashMap<Integer, Set<QuantPeptide>>(); for (QuantPeptide quantPep : cp.getQuantPeptidesList()) { if (!dsQuantPepMap.containsKey(quantPep.getDsKey())) { Set<QuantPeptide> subList = new HashSet<QuantPeptide>(); dsQuantPepMap.put(quantPep.getDsKey(), subList); } Set<QuantPeptide> subList = dsQuantPepMap.get(quantPep.getDsKey()); subList.add(quantPep); dsQuantPepMap.put(quantPep.getDsKey(), subList); } int numb = 0; int panelWidth = Page.getCurrent().getBrowserWindowWidth() - 100; String groupCompTitle = cp.getComparison().getComparisonHeader(); String updatedHeader = groupCompTitle.split(" / ")[0].split("\n")[0] + " / " + groupCompTitle.split(" / ")[1].split("\n")[0];//+ " ( " + groupCompTitle.split(" / ")[1].split("\n")[1] + " )"; ; final StudyInformationPopupComponent studyInformationPopupPanel = new StudyInformationPopupComponent( panelWidth, cp.getProtName(), cp.getUrl(), cp.getComparison().getComparisonFullName()); studyInformationPopupPanel.setVisible(false); LayoutEvents.LayoutClickListener studyListener = new LayoutEvents.LayoutClickListener() { @Override public void layoutClick(LayoutEvents.LayoutClickEvent event) { Integer dsId; if (event.getComponent() instanceof AbsoluteLayout) { dsId = (Integer) ((AbsoluteLayout) event.getComponent()).getData(); } else { dsId = (Integer) ((VerticalLayout) event.getComponent()).getData(); } studyInformationPopupPanel.updateContent(dsToStudyLayoutMap.get(dsId)); } }; TreeSet<QuantProtein> orderSet = new TreeSet<QuantProtein>(cp.getDsQuantProteinsMap().values()); for (QuantProtein quantProtein : orderSet) { StudyInfoData exportData = new StudyInfoData(); exportData.setCoverageWidth(coverageWidth); Label studyTitle = new Label();//"Study " + (numb + 1)); studyTitle.setStyleName("peptideslayoutlabel"); studyTitle.setHeightUndefined(); studyTitle.setWidth("200px"); Label iconTitle = new Label("#Patients (" + (quantProtein.getPatientsGroupIINumber() + quantProtein.getPatientsGroupINumber()) + ")"); exportData.setSubTitle(iconTitle.getValue()); iconTitle.setStyleName("peptideslayoutlabel"); iconTitle.setHeightUndefined(); if (quantProtein.getStringPValue().equalsIgnoreCase("Not Significant") || quantProtein.getStringFCValue().equalsIgnoreCase("Not regulated")) { iconTitle.setStyleName("notregicon"); exportData.setTrend(0); } else if (quantProtein.getStringFCValue().equalsIgnoreCase("Decreased")) { iconTitle.setStyleName("downarricon"); exportData.setTrend(-1); } else { exportData.setTrend(1); iconTitle.setStyleName("uparricon"); } iconTitle.setDescription(cp.getProteinAccssionNumber() + " : #Patients (" + (quantProtein.getPatientsGroupIINumber() + quantProtein.getPatientsGroupINumber()) + ") " + quantProtein.getStringFCValue() + " " + quantProtein.getStringPValue() + ""); VerticalLayout labelContainer = new VerticalLayout(); labelContainer.addComponent(studyTitle); labelContainer.addComponent(iconTitle); proteinSequenceComparisonsContainer.addComponent(labelContainer, 0, numb); proteinSequenceComparisonsContainer.setComponentAlignment(labelContainer, Alignment.TOP_CENTER); Map<Integer, ComparisonDetailsBean> patientGroupsNumToDsIdMap = new HashMap<Integer, ComparisonDetailsBean>(); ComparisonDetailsBean pGr = new ComparisonDetailsBean(); patientGroupsNumToDsIdMap .put((quantProtein.getPatientsGroupIINumber() + quantProtein.getPatientsGroupINumber()), pGr); QuantDatasetObject ds; ds = Quant_Central_Manager.getFullQuantDatasetMap().get(quantProtein.getDsKey()); StudyPopupLayout study = new StudyPopupLayout(panelWidth, quantProtein, ds, cp.getProteinAccssionNumber(), cp.getUrl(), cp.getProtName(), Quant_Central_Manager.getDiseaseHashedColorMap()); Set<QuantDatasetObject> qdsSet = new HashSet<QuantDatasetObject>(); qdsSet.add(ds); study.setInformationData(qdsSet, cp); dsToStudyLayoutMap.put(ds.getDsKey(), study); labelContainer.addLayoutClickListener(studyListener); labelContainer.setData(ds.getDsKey()); studyTitle.setValue("[" + (numb + 1) + "] " + ds.getAuthor()); exportData.setTitle(ds.getAuthor()); if (dsQuantPepMap.get(quantProtein.getDsKey()) == null) { Label noPeptidesInfoLabel = new Label("No Peptide Information Available "); noPeptidesInfoLabel.setHeightUndefined(); noPeptidesInfoLabel.setStyleName("peptideslayoutlabel"); VerticalLayout labelValueContainer = new VerticalLayout(); labelValueContainer.addComponent(noPeptidesInfoLabel); labelValueContainer.addLayoutClickListener(studyListener); labelValueContainer.setData(ds.getDsKey()); proteinSequenceComparisonsContainer.addComponent(labelValueContainer, 1, numb); proteinSequenceComparisonsContainer.setComponentAlignment(labelValueContainer, Alignment.TOP_CENTER); numb++; studiesMap.put((numb + 1) + ds.getAuthor(), exportData); continue; } String key = "_-_" + quantProtein.getDsKey() + "_-_" + cp.getProteinAccssionNumber() + "_-_"; PeptidesInformationOverviewLayout peptideInfoLayout = new PeptidesInformationOverviewLayout( cp.getSequence(), dsQuantPepMap.get(quantProtein.getDsKey()), coverageWidth, true, studyListener, ds.getDsKey()); exportData.setPeptidesInfoList(peptideInfoLayout.getStackedPeptides()); exportData.setLevelsNumber(peptideInfoLayout.getLevel()); hasPTM = peptideInfoLayout.isHasPTM(); peptidesInfoLayoutDSIndexMap.put(key, peptideInfoLayout); proteinSequenceComparisonsContainer.addComponent(peptideInfoLayout, 1, numb); numb++; studiesMap.put((numb + 1) + ds.getAuthor(), exportData); } String rgbColor = Quant_Central_Manager .getDiseaseHashedColor(groupCompTitle.split(" / ")[1].split("\n")[1]); comparisonTitle.setValue("<font color='" + rgbColor + "' style='font-weight: bold;'>" + updatedHeader + " (#Datasets " + numb + "/" + cp.getComparison().getDatasetIndexes().length + ")</font>"); comparisonTitle.setDescription(cp.getComparison().getComparisonFullName()); VerticalLayout bottomSpacer = new VerticalLayout(); bottomSpacer.setWidth((width - 100) + "px"); bottomSpacer.setHeight("10px"); bottomSpacer.setStyleName("dottedline"); this.addComponent(bottomSpacer, 1, 2); }
From source file:probe.com.view.body.searching.SearchingFiltersControl.java
private VerticalLayout initFilterLabel(String title) { Label filterLabel = new Label(title); filterLabel.setContentMode(ContentMode.HTML); filterLabel.setStyleName("showFilterLabelHeader"); filterLabel.setDescription("Drop all " + title + " filter"); VerticalLayout layout = new VerticalLayout(); // layout.setId(title); layout.addComponentAsFirst(filterLabel); layout.addLayoutClickListener(listener); return layout; }
From source file:probe.com.view.body.searching.SearchingFiltersControl.java
private void updateMinFilterL1bel() { minimumfilterLayout.removeAllComponents(); minimumfilterLayout.setWidth("100%"); HorizontalLayout hlo = new HorizontalLayout(); minimumfilterLayout.addComponent(hlo); int index = 0; for (ClosableFilterLabel btn : filtersBtnsMap.values()) { Label l = new Label("[ " + btn.getFilterValue() + " ] "); l.setStyleName("filterNonClosableBtnLabel"); if (index > 4) { hlo = new HorizontalLayout(); minimumfilterLayout.addComponent(hlo); index = 0;//w w w. j av a2s.com } index++; hlo.addComponent(l); } }
From source file:probe.com.view.core.ListSelectDatasetExplorerFilter.java
/** * * @param filterId/* w ww .jav a 2 s . c o m*/ * @param defaultLabel * @param pgArr */ public ListSelectDatasetExplorerFilter(int filterId, String defaultLabel, Set<String> pgArr) { this.setSizeUndefined(); this.filterId = filterId; // this.exploringFiltersManager = exploringFiltersManager; this.setSpacing(true); this.defaultLabel = defaultLabel; Label captionLabel = new Label(defaultLabel); captionLabel.setStyleName("custLabel"); if (!defaultLabel.equalsIgnoreCase("")) { this.addComponent(captionLabel); } list = new ListSelect(); list.setWidth("200px"); list.setHeight("90px"); list.setNullSelectionAllowed(true); list.setMultiSelect(true); for (String str : pgArr) { if (!str.equalsIgnoreCase("")) { list.addItem(str); } } list.setImmediate(true); // HorizontalLayout hlo = new HorizontalLayout(); hlo.setSpacing(true); hlo.addComponent(list); this.addComponent(hlo); clearBtn = new Button("Clear"); clearBtn.setPrimaryStyleName("resetbtn"); clearBtn.setWidth("50px"); clearBtn.setHeight("24px"); clearBtn.addClickListener(ListSelectDatasetExplorerFilter.this); hlo.addComponent(clearBtn); // exploringFiltersManager.registerFilter(ListSelectDatasetExplorerFilter.this); }
From source file:probe.com.view.core.ListSelectFilter.java
/** * * @param control//ww w. j a v a 2 s.c om * @param filterId * @param defaultLabel * @param datasetNamesList */ @SuppressWarnings("LeakingThisInConstructor") public ListSelectFilter(SearchingFiltersControl_t control, int filterId, String defaultLabel, String[] datasetNamesList) { this.setSizeUndefined(); this.filterId = filterId; // this.setStyleName("custLabel"); this.control = control; this.setSpacing(true); // int widthInt = defaultLabel.length() * 7; // String width = "200px"; // if (widthInt > 200) { // width = widthInt + "px"; // } this.defaultLabel = defaultLabel; Label captionLabel = new Label(defaultLabel); // captionLabel.setWidth(width); captionLabel.setStyleName("custLabel"); if (!defaultLabel.equalsIgnoreCase("")) { this.addComponent(captionLabel); } list = new ListSelect(); list.setWidth("200px"); list.setHeight("90px"); list.setNullSelectionAllowed(true); list.setMultiSelect(true); for (String str : datasetNamesList) { list.addItem(str); } list.setImmediate(true); list.addValueChangeListener(this); HorizontalLayout hlo = new HorizontalLayout(); hlo.setSpacing(true); hlo.addComponent(list); // filterConfirmLabel = new FilterConfirmLabel(); // hlo.addComponent(filterConfirmLabel); this.addComponent(hlo); clearBtn = new Button("Clear"); clearBtn.setStyleName(Reindeer.BUTTON_SMALL); clearBtn.addClickListener(this); hlo.addComponent(clearBtn); }
From source file:probe.com.view.core.NotificationComponent.java
public NotificationComponent(String text, String uniqueID) { this.uniqueID = uniqueID; popupBody = new VerticalLayout(); popupBody.setWidthUndefined();//setWidth((200) + "px"); popupBody.setHeightUndefined();//setHeight((200) + "px"); popupBody.setStyleName("notificationbody"); popupBody.addLayoutClickListener(NotificationComponent.this); popup = new PopupView(null, popupBody) { @Override//from ww w. j a v a 2 s.c om public void setPopupVisible(boolean visible) { super.setPopupVisible(visible); //To change body of generated methods, choose Tools | Templates. } @Override public boolean isPopupVisible() { return super.isPopupVisible(); //To change body of generated methods, choose Tools | Templates. } }; this.addComponent(popup); // popupWindow = new Window() { // // @Override // public void close() { // popupWindow.setVisible(false); // } // // }; // // popupWindow.setStyleName("notificationwindow"); // popupWindow.setCaption(null); // popupWindow.setContent(popupBody); // popupWindow.setWindowMode(WindowMode.NORMAL); // popupWindow.setWidthUndefined();//.setWidth((200) + "px"); // popupWindow.setHeightUndefined();//setHeight((200) + "px"); // popupWindow.setVisible(false); // popupWindow.setResizable(false); // popupWindow.setClosable(false); // popupWindow.setModal(false); // popupWindow.setDraggable(false); // popupWindow.setModal(false); // // UI.getCurrent().addWindow(popupWindow); // popupWindow.setPositionX(x); // popupWindow.setPositionY(y); // // popupWindow.setCaptionAsHtml(true); // popupWindow.setClosable(false); popupBody.setMargin(true); popupBody.setSpacing(true); Label content = new Label("<center>" + text + "</center>"); content.setStyleName("notificationtext"); content.setContentMode(ContentMode.HTML); popupBody.addComponent(content); VerticalLayout footer = new VerticalLayout(); footer.setStyleName("bubbletalkfooter"); footer.setWidth("30px"); footer.setHeight("20px"); popupBody.addComponent(footer); popup.setHideOnMouseOut(false); popup.setStyleName("popupnotification"); popupBody.addStyleName("slowinvisible"); }