List of usage examples for com.lowagie.text Phrase getInstance
public static final Phrase getInstance(String string)
From source file:ispyb.client.mx.results.ExportAutoProcAction.java
License:Open Source License
private void setAutoProcInfo(Document document) throws Exception { // header//from w w w . j a v a 2 s .com Table headerTable = new Table(1); headerTable.getDefaultCell().setBorderWidth(0); headerTable.setBorderWidth(0); headerTable.setCellsFitPage(true); headerTable.setAlignment(Element.ALIGN_LEFT); headerTable.getDefaultCell().setHorizontalAlignment(Element.ALIGN_LEFT); headerTable.getDefaultCell().setBackgroundColor(PdfRtfExporter.LIGHT_YELLOW_COLOR); headerTable.getDefaultCell().setLeading(3); headerTable.setWidth(100); // percentage headerTable .addCell(new Paragraph("Crystal data and data-collection statistics", PdfRtfExporter.FONT_DOC_11)); headerTable.addCell(new Paragraph("Values in parentheses are for the highest resolution shell.", PdfRtfExporter.FONT_DOC_11)); document.add(headerTable); document.add(new Paragraph(" ", PdfRtfExporter.VERY_SMALL_FONT)); // auto proc table Table autoProcTable = new Table(2); autoProcTable.getDefaultCell().setBorderWidth(0); autoProcTable.setBorderWidth(0); autoProcTable.setCellsFitPage(true); autoProcTable.setAlignment(Element.ALIGN_LEFT); autoProcTable.getDefaultCell().setHorizontalAlignment(Element.ALIGN_LEFT); // autoProcTable.getDefaultCell().setLeading(3); autoProcTable.setPadding(2); autoProcTable.setWidth(100); // percentage // data String spaceGroup = autoProc == null ? "" : autoProc.getSpaceGroup(); String unitCell_a = autoProc == null ? "" : autoProc.getRefinedCellA().toString(); String unitCell_b = autoProc == null ? "" : autoProc.getRefinedCellB().toString(); String unitCell_c = autoProc == null ? "" : autoProc.getRefinedCellC().toString(); String unitCell_alpha = autoProc == null ? "" : autoProc.getRefinedCellAlpha().toString(); String unitCell_beta = autoProc == null ? "" : autoProc.getRefinedCellBeta().toString(); String unitCell_gamma = autoProc == null ? "" : autoProc.getRefinedCellGamma().toString(); String resolutionRange = ""; String nTotalObservations = ""; String nTotalUniqueReflections = ""; String completeness = ""; String multiplicity = ""; String isigma = ""; String rmerge = ""; if (autoProcStatisticsOverall != null) { resolutionRange = autoProcStatisticsOverall.getResolutionLimitLow() + " - " + autoProcStatisticsOverall.getResolutionLimitHigh(); nTotalObservations = "" + autoProcStatisticsOverall.getnTotalObservations(); nTotalUniqueReflections = "" + (autoProcStatisticsOverall.getnTotalUniqueObservations() == null ? "" : autoProcStatisticsOverall.getnTotalUniqueObservations()); completeness = "" + autoProcStatisticsOverall.getCompleteness(); multiplicity = "" + autoProcStatisticsOverall.getMultiplicity(); isigma = "" + autoProcStatisticsOverall.getMeanIoverSigI(); rmerge = "" + (autoProcStatisticsOverall.getRmerge() == null ? "" : autoProcStatisticsOverall.getRmerge()); } if (autoProcStatisticsOuter != null) { resolutionRange += " (" + autoProcStatisticsOuter.getResolutionLimitLow() + " - " + autoProcStatisticsOuter.getResolutionLimitHigh() + ")"; nTotalObservations += " (" + autoProcStatisticsOuter.getnTotalObservations() + ")"; nTotalUniqueReflections += autoProcStatisticsOuter.getnTotalUniqueObservations() == null ? "" : (" (" + autoProcStatisticsOuter.getnTotalUniqueObservations() + ")"); completeness += " (" + autoProcStatisticsOuter.getCompleteness() + ")"; multiplicity += " (" + autoProcStatisticsOuter.getMultiplicity() + ")"; isigma += " (" + autoProcStatisticsOuter.getMeanIoverSigI() + ")"; rmerge += " (" + (autoProcStatisticsOuter.getRmerge() == null ? "" : autoProcStatisticsOuter.getRmerge()) + ")"; } // space group autoProcTable.addCell(new Paragraph("Space Group", PdfRtfExporter.FONT_DOC_11)); autoProcTable.addCell(new Paragraph(spaceGroup, PdfRtfExporter.FONT_DOC_11)); // unit cell parameters autoProcTable.addCell( new Paragraph("Unit-cell parameters (" + Constants.ANGSTROM + ")", PdfRtfExporter.FONT_DOC_11)); autoProcTable.addCell(new Paragraph("", PdfRtfExporter.FONT_DOC_11)); Paragraph pa = new Paragraph("\t a", PdfRtfExporter.FONT_DOC_11); pa.setAlignment(Element.ALIGN_JUSTIFIED); pa.setIndentationLeft(PdfRtfExporter.INDENTATION_LEFT); autoProcTable.addCell(pa); autoProcTable.addCell(new Paragraph(unitCell_a, PdfRtfExporter.FONT_DOC_11)); Paragraph pb = new Paragraph("\t b", PdfRtfExporter.FONT_DOC_11); pb.setAlignment(Element.ALIGN_JUSTIFIED); pb.setIndentationLeft(PdfRtfExporter.INDENTATION_LEFT); autoProcTable.addCell(pb); autoProcTable.addCell(new Paragraph(unitCell_b, PdfRtfExporter.FONT_DOC_11)); Paragraph pc = new Paragraph("\t c", PdfRtfExporter.FONT_DOC_11); pc.setAlignment(Element.ALIGN_JUSTIFIED); pc.setIndentationLeft(PdfRtfExporter.INDENTATION_LEFT); autoProcTable.addCell(pc); autoProcTable.addCell(new Paragraph(unitCell_c, PdfRtfExporter.FONT_DOC_11)); // Issue 1733: cell angles info added Paragraph palpha = new Paragraph("\t alpha", PdfRtfExporter.FONT_DOC_11); palpha.setAlignment(Element.ALIGN_JUSTIFIED); palpha.setIndentationLeft(PdfRtfExporter.INDENTATION_LEFT); autoProcTable.addCell(palpha); autoProcTable.addCell(new Paragraph(unitCell_alpha, PdfRtfExporter.FONT_DOC_11)); Paragraph pbeta = new Paragraph("\t beta", PdfRtfExporter.FONT_DOC_11); pbeta.setAlignment(Element.ALIGN_JUSTIFIED); pbeta.setIndentationLeft(PdfRtfExporter.INDENTATION_LEFT); autoProcTable.addCell(pbeta); autoProcTable.addCell(new Paragraph(unitCell_beta, PdfRtfExporter.FONT_DOC_11)); Paragraph pgamma = new Paragraph("\t gamma", PdfRtfExporter.FONT_DOC_11); pgamma.setAlignment(Element.ALIGN_JUSTIFIED); pgamma.setIndentationLeft(PdfRtfExporter.INDENTATION_LEFT); autoProcTable.addCell(pgamma); autoProcTable.addCell(new Paragraph(unitCell_gamma, PdfRtfExporter.FONT_DOC_11)); // resolution range autoProcTable.addCell( new Paragraph("Resolution range (" + Constants.ANGSTROM + ")", PdfRtfExporter.FONT_DOC_11)); autoProcTable.addCell(new Paragraph(resolutionRange, PdfRtfExporter.FONT_DOC_11)); // Observed reflections autoProcTable.addCell(new Paragraph("Observed reflections", PdfRtfExporter.FONT_DOC_11)); autoProcTable.addCell(new Paragraph(nTotalObservations, PdfRtfExporter.FONT_DOC_11)); // No. of unique reflections autoProcTable.addCell(new Paragraph("No. of unique reflections", PdfRtfExporter.FONT_DOC_11)); autoProcTable.addCell(new Paragraph(nTotalUniqueReflections, PdfRtfExporter.FONT_DOC_11)); // Completeness autoProcTable.addCell(new Paragraph("Completeness (%)", PdfRtfExporter.FONT_DOC_11)); autoProcTable.addCell(new Paragraph(completeness, PdfRtfExporter.FONT_DOC_11)); // multiplicity autoProcTable.addCell(new Paragraph("Multiplicity", PdfRtfExporter.FONT_DOC_11)); autoProcTable.addCell(new Paragraph(multiplicity, PdfRtfExporter.FONT_DOC_11)); new Phrase(); // I/(I) Phrase p = Phrase.getInstance("<I/" + (char) 963 + "(I)>"); p.setFont(PdfRtfExporter.FONT_DOC_11); autoProcTable.addCell(p); autoProcTable.addCell(new Paragraph(isigma, PdfRtfExporter.FONT_DOC_11)); // Rmerge Chunk c1 = new Chunk("R", PdfRtfExporter.FONT_DOC_11); Chunk c2 = new Chunk("merge", PdfRtfExporter.FONT_DOC_EXPONENT); c2.setTextRise(PdfRtfExporter.TEXT_RISE_SUB); Chunk c3 = new Chunk("(%)", PdfRtfExporter.FONT_DOC_11); Chunk c4 = new Chunk("#", PdfRtfExporter.FONT_DOC_EXPONENT_BLUE); c4.setTextRise(PdfRtfExporter.TEXT_RISE_EXP); Paragraph rMergeParagraph = new Paragraph(); rMergeParagraph.add(c1); rMergeParagraph.add(c2); rMergeParagraph.add(c3); rMergeParagraph.add(c4); autoProcTable.addCell(rMergeParagraph); autoProcTable.addCell(new Paragraph(rmerge, PdfRtfExporter.FONT_DOC_11)); document.add(autoProcTable); document.add(new Paragraph(" ", PdfRtfExporter.FONT_DOC_11)); // nota bene info Paragraph nbParagraph = new Paragraph(); nbParagraph.add(c4); nbParagraph.add(c1); nbParagraph.add(c2); Chunk cesp = new Chunk(" ", PdfRtfExporter.FONT_DOC_11); Chunk c5 = new Chunk(" = ", PdfRtfExporter.FONT_DOC_11); nbParagraph.add(c5); Phrase pSigma = Phrase.getInstance("" + (char) 931); pSigma.setFont(PdfRtfExporter.FONT_DOC_11); nbParagraph.add(pSigma); Chunk chkl = new Chunk("hkl", PdfRtfExporter.FONT_DOC_EXPONENT); chkl.setTextRise(PdfRtfExporter.TEXT_RISE_SUB); nbParagraph.add(chkl); nbParagraph.add(cesp); nbParagraph.add(pSigma); Chunk ci = new Chunk("i", PdfRtfExporter.FONT_DOC_EXPONENT); ci.setTextRise(PdfRtfExporter.TEXT_RISE_SUB); nbParagraph.add(ci); Chunk c8 = new Chunk(" |I", PdfRtfExporter.FONT_DOC_11); nbParagraph.add(c8); nbParagraph.add(ci); Chunk c9 = new Chunk("(hkl) - (I(hkl))| / ", PdfRtfExporter.FONT_DOC_11); nbParagraph.add(c9); nbParagraph.add(pSigma); nbParagraph.add(chkl); nbParagraph.add(cesp); nbParagraph.add(pSigma); nbParagraph.add(ci); nbParagraph.add(cesp); Chunk c10 = new Chunk("I", PdfRtfExporter.FONT_DOC_11); nbParagraph.add(c10); nbParagraph.add(ci); Chunk c11 = new Chunk("(hkl), where ", PdfRtfExporter.FONT_DOC_11); nbParagraph.add(c11); Chunk c12 = new Chunk("I", PdfRtfExporter.FONT_DOC_11_ITALIC); nbParagraph.add(c12); Chunk cii = new Chunk("i", PdfRtfExporter.FONT_DOC_EXPONENT_ITALIC); cii.setTextRise(PdfRtfExporter.TEXT_RISE_SUB); nbParagraph.add(cii); Chunk c13 = new Chunk("(hkl)", PdfRtfExporter.FONT_DOC_11_ITALIC); nbParagraph.add(c13); Chunk c14 = new Chunk(" is the ", PdfRtfExporter.FONT_DOC_11); nbParagraph.add(c14); Chunk c15 = new Chunk("i", PdfRtfExporter.FONT_DOC_11_ITALIC); nbParagraph.add(c15); Chunk c16 = new Chunk("th observation of reflection ", PdfRtfExporter.FONT_DOC_11); nbParagraph.add(c16); Chunk chklI = new Chunk("hkl", PdfRtfExporter.FONT_DOC_11_ITALIC); nbParagraph.add(chklI); Chunk c17 = new Chunk(" and ", PdfRtfExporter.FONT_DOC_11); nbParagraph.add(c17); Chunk c18 = new Chunk("<I(hkl)> ", PdfRtfExporter.FONT_DOC_11_ITALIC); nbParagraph.add(c18); Chunk c19 = new Chunk(" is the weighted average intensity for all observations of reflection ", PdfRtfExporter.FONT_DOC_11); nbParagraph.add(c19); nbParagraph.add(chklI); Chunk c20 = new Chunk(".", PdfRtfExporter.FONT_DOC_11); nbParagraph.add(c20); document.add(nbParagraph); document.add(new Paragraph(" ", PdfRtfExporter.FONT_DOC_11)); }