Download RNA Comparative Analysis Software Tools

BuildProcessTemplates/DefaultTemplate.11.1.xaml
BuildProcessTemplates/DefaultTemplate.xaml
BuildProcessTemplates/LabDefaultTemplate.11.xaml
BuildProcessTemplates/UpgradeTemplate.xaml
CATUI/branches/version2.00/Bio.Data.Providers.FastA/Bio.Data.Providers.FastA.csproj
CATUI/branches/version2.00/Bio.Data.Providers.FastA/FastAFile.cs
CATUI/branches/version2.00/Bio.Data.Providers.FastA/FastAFileFactory.cs
CATUI/branches/version2.00/Bio.Data.Providers.FastA/FastAFileSequenceDataProvider.cs
CATUI/branches/version2.00/Bio.Data.Providers.FastA/FastASequence.cs
CATUI/branches/version2.00/Bio.Data.Providers.FastA/NcHelpers.cs
CATUI/branches/version2.00/Bio.Data.Providers.FastA/Properties/AssemblyInfo.cs
CATUI/branches/version2.00/Bio.Data.Providers.FastA/images/alignmentFile.ico
CATUI/branches/version2.00/Bio.Data.Providers.PDB/Bio.Data.Providers.PDB.csproj
CATUI/branches/version2.00/Bio.Data.Providers.PDB/PdbFile.cs
CATUI/branches/version2.00/Bio.Data.Providers.PDB/PdbFileFactory.cs
CATUI/branches/version2.00/Bio.Data.Providers.PDB/Properties/AssemblyInfo.cs
CATUI/branches/version2.00/Bio.Data.Providers.PDB/images/molecule.ico
CATUI/branches/version2.00/Bio.Data.Providers.Structure/BPSeqFile.cs
CATUI/branches/version2.00/Bio.Data.Providers.Structure/BPSeqFileProvider.cs
CATUI/branches/version2.00/Bio.Data.Providers.Structure/Bio.Data.Providers.Structure.csproj
CATUI/branches/version2.00/Bio.Data.Providers.Structure/Position.cs
CATUI/branches/version2.00/Bio.Data.Providers.Structure/Properties/AssemblyInfo.cs
CATUI/branches/version2.00/Bio.Data.Providers.Structure/XRNABasePair.cs
CATUI/branches/version2.00/Bio.Data.Providers.Structure/XRNABasePairConnector.cs
CATUI/branches/version2.00/Bio.Data.Providers.Structure/XRNABasePairConnectorCircle.cs
CATUI/branches/version2.00/Bio.Data.Providers.Structure/XRNAFile.cs
CATUI/branches/version2.00/Bio.Data.Providers.Structure/XRNALabels.cs
CATUI/branches/version2.00/Bio.Data.Providers.Structure/XRNANucleotide.cs
CATUI/branches/version2.00/Bio.Data.Providers.Structure/XrnaFileProvider.cs
CATUI/branches/version2.00/Bio.Data.Providers.Structure/images/nestedDiagram.ico
CATUI/branches/version2.00/Bio.Data.Providers.Structure/images/secondaryStruct.ico
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Bio.Data.Providers.rCAD.RI.csproj
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Models/AlignmentFilter.cs
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Models/DbAlignedBioEntity.cs
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Models/DbAlignmentProvider.cs
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Models/KeyNameData.cs
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Models/RcadConnection.cs
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Models/SecurityType.cs
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Models/TaxonomyEntry.cs
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Properties/AssemblyInfo.cs
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Properties/Resources.Designer.cs
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Properties/Resources.resx
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Properties/Settings.Designer.cs
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Properties/Settings.settings
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/RCADSequenceProvider.cs
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/RcadLoaderFactory.cs
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Resources/DataTemplates.xaml
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Resources/DataTemplates.xaml.cs
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/ViewModels/FilterListViewModel.cs
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/ViewModels/FilterViewModel.cs
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Views/CreateNewConnection.xaml
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Views/CreateNewConnection.xaml.cs
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Views/SelectExistingConnection.xaml
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/Views/SelectExistingConnection.xaml.cs
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/app.config
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/images/alignmentDb.ico
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/rcad.dbml
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/rcad.dbml.layout
CATUI/branches/version2.00/Bio.Data.Providers.rCAD.RI/rcad.designer.cs
CATUI/branches/version2.00/Bio.Data.Providers/Bio.Data.Providers.csproj
CATUI/branches/version2.00/Bio.Data.Providers/BioDataLoaderFactory.cs
CATUI/branches/version2.00/Bio.Data.Providers/BioFormatAttribute.cs
CATUI/branches/version2.00/Bio.Data.Providers/BioFormatType.cs
CATUI/branches/version2.00/Bio.Data.Providers/Helpers/SimpleRNABasePair.cs
CATUI/branches/version2.00/Bio.Data.Providers/Helpers/SimpleRNASequence.cs
CATUI/branches/version2.00/Bio.Data.Providers/Interfaces/IBioDataLoader.cs
CATUI/branches/version2.00/Bio.Data.Providers/Interfaces/IBioDataLoaderProperties.cs
CATUI/branches/version2.00/Bio.Data.Providers/Interfaces/IBioDataProvider.cs
CATUI/branches/version2.00/Bio.Data.Providers/Properties/AssemblyInfo.cs
CATUI/branches/version2.00/Bio.Data.Providers/Virtualization/IVirtualizingListDataProvider.cs
CATUI/branches/version2.00/Bio.Data.Providers/Virtualization/VirtualizingList.cs
CATUI/branches/version2.00/Bio.Data.UnitTests/AuthoringTests.txt
CATUI/branches/version2.00/Bio.Data.UnitTests/Bio.Data.UnitTests.csproj
CATUI/branches/version2.00/Bio.Data.UnitTests/BioExtensiblePropertyBaseTest.cs
CATUI/branches/version2.00/Bio.Data.UnitTests/Properties/AssemblyInfo.cs
CATUI/branches/version2.00/Bio.Data.UnitTests/Test References/Bio.Data.accessor
CATUI/branches/version2.00/Bio.Data/Bio.Data.csproj
CATUI/branches/version2.00/Bio.Data/BioExtensiblePropertyBase.cs
CATUI/branches/version2.00/Bio.Data/BioSymbol.cs
CATUI/branches/version2.00/Bio.Data/BioSymbolType.cs
CATUI/branches/version2.00/Bio.Data/BioValidator.cs
CATUI/branches/version2.00/Bio.Data/Interfaces/IAlignedBioEntity.cs
CATUI/branches/version2.00/Bio.Data/Interfaces/IBasePairEntity.cs
CATUI/branches/version2.00/Bio.Data/Interfaces/IBioEntity.cs
CATUI/branches/version2.00/Bio.Data/Interfaces/IBioEntityBase.cs
CATUI/branches/version2.00/Bio.Data/Interfaces/IBioSymbol.cs
CATUI/branches/version2.00/Bio.Data/Interfaces/IBioValidator.cs
CATUI/branches/version2.00/Bio.Data/Interfaces/IExtensibleProperties.cs
CATUI/branches/version2.00/Bio.Data/Interfaces/IStreamBioEntity.cs
CATUI/branches/version2.00/Bio.Data/Interfaces/IStructureModelBioEntity.cs
CATUI/branches/version2.00/Bio.Data/Properties/AssemblyInfo.cs
CATUI/branches/version2.00/Bio.SharedResources/Bio.SharedResources.csproj
CATUI/branches/version2.00/Bio.SharedResources/Properties/AssemblyInfo.cs
CATUI/branches/version2.00/Bio.SharedResources/Properties/Resources.Designer.cs
CATUI/branches/version2.00/Bio.SharedResources/Properties/Resources.resx
CATUI/branches/version2.00/Bio.SharedResources/Properties/Settings.Designer.cs
CATUI/branches/version2.00/Bio.SharedResources/Properties/Settings.settings
CATUI/branches/version2.00/Bio.SharedResources/Styles.xaml
CATUI/branches/version2.00/Bio.SharedResources/Theme.xaml
CATUI/branches/version2.00/Bio.Views.Alignment/Bio.Views.Alignment.csproj
CATUI/branches/version2.00/Bio.Views.Alignment/Models/GroupCollapseStyle.cs
CATUI/branches/version2.00/Bio.Views.Alignment/Models/GroupHeader.cs
CATUI/branches/version2.00/Bio.Views.Alignment/Models/GroupListGenerator.cs
CATUI/branches/version2.00/Bio.Views.Alignment/Properties/AssemblyInfo.cs
CATUI/branches/version2.00/Bio.Views.Alignment/Properties/Resources.Designer.cs
CATUI/branches/version2.00/Bio.Views.Alignment/Properties/Resources.resx
CATUI/branches/version2.00/Bio.Views.Alignment/Properties/Settings.Designer.cs
CATUI/branches/version2.00/Bio.Views.Alignment/Properties/Settings.settings
CATUI/branches/version2.00/Bio.Views.Alignment/ViewModels/AlignmentViewModel.cs
CATUI/branches/version2.00/Bio.Views.Alignment/ViewModels/AlignmentViewModelCreator.cs
CATUI/branches/version2.00/Bio.Views.Alignment/ViewModels/CellViewModel.cs
CATUI/branches/version2.00/Bio.Views.Alignment/ViewModels/RowViewModel.cs
CATUI/branches/version2.00/Bio.Views.Alignment/Views/AlignmentEditor.xaml
CATUI/branches/version2.00/Bio.Views.Alignment/Views/AlignmentEditor.xaml.cs
CATUI/branches/version2.00/Bio.Views.Alignment/Views/DataGridNucleotideColumn.cs
CATUI/branches/version2.00/Bio.Views.Alignment/Views/HeaderRulerIndex.cs
CATUI/branches/version2.00/Bio.Views.Alignment/images/alignment.ico
CATUI/branches/version2.00/Bio.Views.MoleculeViewer/Bio.Views.MoleculeViewer.csproj
CATUI/branches/version2.00/Bio.Views.MoleculeViewer/BioMoleculeView.xaml
CATUI/branches/version2.00/Bio.Views.MoleculeViewer/BioMoleculeView.xaml.cs
CATUI/branches/version2.00/Bio.Views.MoleculeViewer/BioMoleculeViewCreator.cs
CATUI/branches/version2.00/Bio.Views.MoleculeViewer/BioMoleculeViewModel.cs
CATUI/branches/version2.00/Bio.Views.MoleculeViewer/Properties/AssemblyInfo.cs
CATUI/branches/version2.00/Bio.Views.MoleculeViewer/Properties/Resources.Designer.cs
CATUI/branches/version2.00/Bio.Views.MoleculeViewer/Properties/Resources.resx
CATUI/branches/version2.00/Bio.Views.MoleculeViewer/Properties/Settings.Designer.cs
CATUI/branches/version2.00/Bio.Views.MoleculeViewer/Properties/Settings.settings
CATUI/branches/version2.00/Bio.Views.MoleculeViewer/images/molecule.ico
CATUI/branches/version2.00/Bio.Views.Structure/Bio.Views.Structure.csproj
CATUI/branches/version2.00/Bio.Views.Structure/CircleStructureBrowser.xaml
CATUI/branches/version2.00/Bio.Views.Structure/CircleStructureBrowser.xaml.cs
CATUI/branches/version2.00/Bio.Views.Structure/Images/circleDiagram.ico
CATUI/branches/version2.00/Bio.Views.Structure/Images/nestedDiagram.ico
CATUI/branches/version2.00/Bio.Views.Structure/Images/secondaryStruct.ico
CATUI/branches/version2.00/Bio.Views.Structure/Models/PhyloDData.cs
CATUI/branches/version2.00/Bio.Views.Structure/Models/PhyloDInteraction.cs
CATUI/branches/version2.00/Bio.Views.Structure/NestedStructureBrowser.xaml
CATUI/branches/version2.00/Bio.Views.Structure/NestedStructureBrowser.xaml.cs
CATUI/branches/version2.00/Bio.Views.Structure/Properties/AssemblyInfo.cs
CATUI/branches/version2.00/Bio.Views.Structure/Properties/Resources.Designer.cs
CATUI/branches/version2.00/Bio.Views.Structure/Properties/Resources.resx
CATUI/branches/version2.00/Bio.Views.Structure/Properties/Settings.Designer.cs
CATUI/branches/version2.00/Bio.Views.Structure/Properties/Settings.settings
CATUI/branches/version2.00/Bio.Views.Structure/SecondaryStructureBrowser.xaml
CATUI/branches/version2.00/Bio.Views.Structure/SecondaryStructureBrowser.xaml.cs
CATUI/branches/version2.00/Bio.Views.Structure/StructureValueConverters.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/CircleBasePairViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/CircleElementBaseViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/CircleElementViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/CircleSequenceViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/CircleStructureBrowserMessages.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/CircleTickLabelViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/CircleTickMarkViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/CircleViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/CircleViewModelCreator.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/NestedBasePairViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/NestedElementBaseViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/NestedElementTickViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/NestedElementViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/NestedStructureCreator.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/NestedViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/PhyloDCircleViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/PhyloDInteractionCircleViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/SSArcLabelViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/SSArrowLabelViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/SSBasePairCircleConnectorViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/SSBasePairLineConnectorViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/SSBasePairViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/SSElementBaseViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/SSLineLabelViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/SSParallelogramLabelViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/SSSymbolViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/SSTextLabelViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/SSViewModel.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/SecondaryStructureCreator.cs
CATUI/branches/version2.00/Bio.Views.Structure/ViewModels/StructureViewModelBase.cs
CATUI/branches/version2.00/Bio.Views/Bio.Views.csproj
CATUI/branches/version2.00/Bio.Views/BioViewAttribute.cs
CATUI/branches/version2.00/Bio.Views/BioViewProviderFactory.cs
CATUI/branches/version2.00/Bio.Views/Interfaces/IBioViewProvider.cs
CATUI/branches/version2.00/Bio.Views/Properties/AssemblyInfo.cs
CATUI/branches/version2.00/Bio.Views/ViewModels/BioViewModel.cs
CATUI/branches/version2.00/Bio.Views/ViewModels/ViewMessages.cs
CATUI/branches/version2.00/Bio.Views/Views/BioFloatingWindow.xaml
CATUI/branches/version2.00/Bio.Views/Views/BioFloatingWindow.xaml.cs
CATUI/branches/version2.00/Browser/App.config
CATUI/branches/version2.00/Browser/App.xaml
CATUI/branches/version2.00/Browser/App.xaml.cs
CATUI/branches/version2.00/Browser/BioBrowser.csproj
CATUI/branches/version2.00/Browser/MainWindow.xaml
CATUI/branches/version2.00/Browser/MainWindow.xaml.cs
CATUI/branches/version2.00/Browser/Models/BioDataFile.cs
CATUI/branches/version2.00/Browser/Models/Extensions.cs
CATUI/branches/version2.00/Browser/Models/MefManager.cs
CATUI/branches/version2.00/Browser/Models/MenuItem.cs
CATUI/branches/version2.00/Browser/Models/Workspace.cs
CATUI/branches/version2.00/Browser/Properties/AssemblyInfo.cs
CATUI/branches/version2.00/Browser/Properties/Resources.Designer.cs
CATUI/branches/version2.00/Browser/Properties/Resources.resx
CATUI/branches/version2.00/Browser/Properties/Settings.Designer.cs
CATUI/branches/version2.00/Browser/Properties/Settings.settings
CATUI/branches/version2.00/Browser/ViewModels/AddOpenFileViewModel.cs
CATUI/branches/version2.00/Browser/ViewModels/BioCategoryViewModel.cs
CATUI/branches/version2.00/Browser/ViewModels/MainViewModel.cs
CATUI/branches/version2.00/Browser/ViewModels/OpenBioDataViewModel.cs
CATUI/branches/version2.00/Browser/ViewModels/OpenBioViewModel.cs
CATUI/branches/version2.00/Browser/ViewModels/SelectionViewModel.cs
CATUI/branches/version2.00/Browser/ViewModels/ViewMessages.cs
CATUI/branches/version2.00/Browser/ViewModels/WorkspaceRootViewModel.cs
CATUI/branches/version2.00/Browser/ViewModels/WorkspaceViewModel.cs
CATUI/branches/version2.00/Browser/Views/AddOpenFileView.xaml
CATUI/branches/version2.00/Browser/Views/AddOpenFileView.xaml.cs
CATUI/branches/version2.00/Browser/images/alignment.ico
CATUI/branches/version2.00/Browser/images/attachment.png
CATUI/branches/version2.00/Browser/images/catui.ico
CATUI/branches/version2.00/Browser/images/molecule.ico
CATUI/branches/version2.00/Browser/images/secondaryStruct.ico
CATUI/branches/version2.00/Browser/images/splashScreen-600x256.png
CATUI/branches/version2.00/Browser/images/tagged_heart.png
CATUI/branches/version2.00/CATUI.Installer/CATUI.Installer.vdproj
CATUI/branches/version2.00/Dependencies/CATUI.Installer.Banner.bmp
CATUI/branches/version2.00/Dependencies/JulMar.Wpf.Helpers.chm
CATUI/branches/version2.00/Dependencies/JulMar.Wpf.Helpers.dll
CATUI/branches/version2.00/Dependencies/JulMar.Wpf.Helpers.pdb
CATUI/branches/version2.00/Dependencies/JulMar.Wpf.Helpers.xml
CATUI/branches/version2.00/Dependencies/Julmar.Wpf.Behaviors.XML
CATUI/branches/version2.00/Dependencies/Julmar.Wpf.Behaviors.dll
CATUI/branches/version2.00/Dependencies/Microsoft.Expression.Interactions.dll
CATUI/branches/version2.00/Dependencies/Microsoft.Expression.Interactions.xml
CATUI/branches/version2.00/Dependencies/MoleculeViewer.exe
CATUI/branches/version2.00/Dependencies/System.ComponentModel.Composition.dll
CATUI/branches/version2.00/Dependencies/System.ComponentModel.Composition.pdb
CATUI/branches/version2.00/Dependencies/System.ComponentModel.Composition.xml
CATUI/branches/version2.00/Dependencies/System.Threading.dll
CATUI/branches/version2.00/Dependencies/System.Windows.Interactivity.dll
CATUI/branches/version2.00/Dependencies/System.Windows.Interactivity.xml
CATUI/branches/version2.00/Dependencies/WPFToolkit.dll
CATUI/branches/version2.00/Dependencies/WPFToolkit.pdb
CATUI/branches/version2.00/Dependencies/de/System.Windows.Interactivity.resources.dll
CATUI/branches/version2.00/Dependencies/en/System.Windows.Interactivity.resources.dll
CATUI/branches/version2.00/Dependencies/es/System.Windows.Interactivity.resources.dll
CATUI/branches/version2.00/Dependencies/fr/System.Windows.Interactivity.resources.dll
CATUI/branches/version2.00/Dependencies/it/System.Windows.Interactivity.resources.dll
CATUI/branches/version2.00/Dependencies/ja/System.Windows.Interactivity.resources.dll
CATUI/branches/version2.00/Dependencies/ko/System.Windows.Interactivity.resources.dll
CATUI/branches/version2.00/Dependencies/zh-Hans/System.Windows.Interactivity.resources.dll
CATUI/branches/version2.00/Dependencies/zh-Hant/System.Windows.Interactivity.resources.dll
CATUI/branches/version2.00/LocalTestRun.testrunconfig
CATUI/branches/version2.00/RNA.sln//from www. ja  v a2s . c o m
CATUI/branches/version2.00/RNA.suo
CATUI/branches/version2.00/RNA.vsmdi
CATUI/branches/version3.00/Bio.Controls.ColorPicker/Bio.Controls.ColorPicker.csproj
CATUI/branches/version3.00/Bio.Controls.ColorPicker/ColorPicker.xaml
CATUI/branches/version3.00/Bio.Controls.ColorPicker/ColorPicker.xaml.cs
CATUI/branches/version3.00/Bio.Controls.ColorPicker/ColorSaturationSelector.cs
CATUI/branches/version3.00/Bio.Controls.ColorPicker/ColorUtilities.cs
CATUI/branches/version3.00/Bio.Controls.ColorPicker/HueSelector.cs
CATUI/branches/version3.00/Bio.Controls.ColorPicker/Properties/AssemblyInfo.cs
CATUI/branches/version3.00/Bio.Controls.ColorPicker/Properties/Resources.Designer.cs
CATUI/branches/version3.00/Bio.Controls.ColorPicker/Properties/Resources.resx
CATUI/branches/version3.00/Bio.Controls.ColorPicker/Properties/Settings.Designer.cs
CATUI/branches/version3.00/Bio.Controls.ColorPicker/Properties/Settings.settings
CATUI/branches/version3.00/Bio.Data.Providers.AE2/AE2File.cs
CATUI/branches/version3.00/Bio.Data.Providers.AE2/AE2FileFactory.cs
CATUI/branches/version3.00/Bio.Data.Providers.AE2/AE2Sequence.cs
CATUI/branches/version3.00/Bio.Data.Providers.AE2/Bio.Data.Providers.AE2.csproj
CATUI/branches/version3.00/Bio.Data.Providers.AE2/Properties/AssemblyInfo.cs
CATUI/branches/version3.00/Bio.Data.Providers.AE2/images/alignmentFile.ico
CATUI/branches/version3.00/Bio.Data.Providers.FastA/Bio.Data.Providers.FastA.csproj
CATUI/branches/version3.00/Bio.Data.Providers.FastA/FastAFile.cs
CATUI/branches/version3.00/Bio.Data.Providers.FastA/FastAFileFactory.cs
CATUI/branches/version3.00/Bio.Data.Providers.FastA/FastAFileSequenceDataProvider.cs
CATUI/branches/version3.00/Bio.Data.Providers.FastA/FastASequence.cs
CATUI/branches/version3.00/Bio.Data.Providers.FastA/NcHelpers.cs
CATUI/branches/version3.00/Bio.Data.Providers.FastA/Properties/AssemblyInfo.cs
CATUI/branches/version3.00/Bio.Data.Providers.FastA/images/alignmentFile.ico
CATUI/branches/version3.00/Bio.Data.Providers.PDB/Bio.Data.Providers.PDB.csproj
CATUI/branches/version3.00/Bio.Data.Providers.PDB/PdbFile.cs
CATUI/branches/version3.00/Bio.Data.Providers.PDB/PdbFileFactory.cs
CATUI/branches/version3.00/Bio.Data.Providers.PDB/Properties/AssemblyInfo.cs
CATUI/branches/version3.00/Bio.Data.Providers.PDB/images/molecule.ico
CATUI/branches/version3.00/Bio.Data.Providers.Structure/BPSeqFile.cs
CATUI/branches/version3.00/Bio.Data.Providers.Structure/BPSeqFileProvider.cs
CATUI/branches/version3.00/Bio.Data.Providers.Structure/Bio.Data.Providers.Structure.csproj
CATUI/branches/version3.00/Bio.Data.Providers.Structure/Position.cs
CATUI/branches/version3.00/Bio.Data.Providers.Structure/Properties/AssemblyInfo.cs
CATUI/branches/version3.00/Bio.Data.Providers.Structure/XRNABasePair.cs
CATUI/branches/version3.00/Bio.Data.Providers.Structure/XRNABasePairConnector.cs
CATUI/branches/version3.00/Bio.Data.Providers.Structure/XRNABasePairConnectorCircle.cs
CATUI/branches/version3.00/Bio.Data.Providers.Structure/XRNAFile.cs
CATUI/branches/version3.00/Bio.Data.Providers.Structure/XRNALabels.cs
CATUI/branches/version3.00/Bio.Data.Providers.Structure/XRNANucleotide.cs
CATUI/branches/version3.00/Bio.Data.Providers.Structure/XrnaFileProvider.cs
CATUI/branches/version3.00/Bio.Data.Providers.Structure/images/nestedDiagram.ico
CATUI/branches/version3.00/Bio.Data.Providers.Structure/images/secondaryStruct.ico
CATUI/branches/version3.00/Bio.Data.Providers.rCAD.RI/Bio.Data.Providers.rCAD.RI.csproj
CATUI/branches/version3.00/Bio.Data.Providers.rCAD.RI/Models/AlignmentFilter.cs
CATUI/branches/version3.00/Bio.Data.Providers.rCAD.RI/Models/DbAlignedBioEntity.cs
CATUI/branches/version3.00/Bio.Data.Providers.rCAD.RI/Models/DbAlignmentProvider.cs
CATUI/branches/version3.00/Bio.Data.Providers.rCAD.RI/Models/KeyNameData.cs
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CATUI/trunk/Bio.Views.Alignment/Internal/RowSelector.cs
CATUI/trunk/Bio.Views.Alignment/Internal/SequenceTextDrawingVisual.cs
CATUI/trunk/Bio.Views.Alignment/Linking/LinkedAlignmentViewProxy.cs
CATUI/trunk/Bio.Views.Alignment/Options/DisplayOptionsViewModel.cs
CATUI/trunk/Bio.Views.Alignment/Options/OptionPane.cs
CATUI/trunk/Bio.Views.Alignment/Options/OptionsWindow.xaml
CATUI/trunk/Bio.Views.Alignment/Options/OptionsWindow.xaml.cs
CATUI/trunk/Bio.Views.Alignment/Options/RuntimeOptionsViewModel.cs
CATUI/trunk/Bio.Views.Alignment/Properties/AssemblyInfo.cs
CATUI/trunk/Bio.Views.Alignment/Properties/Resources.Designer.cs
CATUI/trunk/Bio.Views.Alignment/Properties/Resources.resx
CATUI/trunk/Bio.Views.Alignment/Properties/Settings.Designer.cs
CATUI/trunk/Bio.Views.Alignment/Properties/Settings.settings
CATUI/trunk/Bio.Views.Alignment/Settings.cs
CATUI/trunk/Bio.Views.Alignment/Text/RectSelectionAdorner.cs
CATUI/trunk/Bio.Views.Alignment/Text/SequenceTextStore.cs
CATUI/trunk/Bio.Views.Alignment/Text/SimpleTextParagraphProperties.cs
CATUI/trunk/Bio.Views.Alignment/Text/SimpleTextRunProperties.cs
CATUI/trunk/Bio.Views.Alignment/Themes/generic.xaml
CATUI/trunk/Bio.Views.Alignment/ViewModels/AlignmentEntityViewModel.cs
CATUI/trunk/Bio.Views.Alignment/ViewModels/AlignmentViewModel.cs
CATUI/trunk/Bio.Views.Alignment/ViewModels/AlignmentViewModelCreator.cs
CATUI/trunk/Bio.Views.Alignment/ViewModels/BirdsEyeViewModel.cs
CATUI/trunk/Bio.Views.Alignment/ViewModels/FindSearchViewModel.cs
CATUI/trunk/Bio.Views.Alignment/ViewModels/GotoColumnViewModel.cs
CATUI/trunk/Bio.Views.Alignment/ViewModels/SplitPaneViewModel.cs
CATUI/trunk/Bio.Views.Alignment/ViewModels/TaxonomyJumpViewModel.cs
CATUI/trunk/Bio.Views.Alignment/Views/AlignmentEditor.xaml
CATUI/trunk/Bio.Views.Alignment/Views/AlignmentEditor.xaml.cs
CATUI/trunk/Bio.Views.Alignment/Views/BirdsEyeViewer.xaml
CATUI/trunk/Bio.Views.Alignment/Views/BirdsEyeViewer.xaml.cs
CATUI/trunk/Bio.Views.Alignment/Views/FindSearchView.xaml
CATUI/trunk/Bio.Views.Alignment/Views/FindSearchView.xaml.cs
CATUI/trunk/Bio.Views.Alignment/Views/GotoColumnRowView.xaml
CATUI/trunk/Bio.Views.Alignment/Views/GotoColumnRowView.xaml.cs
CATUI/trunk/Bio.Views.Alignment/Views/GotoRefSeqColumnView.xaml
CATUI/trunk/Bio.Views.Alignment/Views/GotoRefSeqColumnView.xaml.cs
CATUI/trunk/Bio.Views.Alignment/Views/TaxonomyJumpView.xaml
CATUI/trunk/Bio.Views.Alignment/Views/TaxonomyJumpView.xaml.cs
CATUI/trunk/Bio.Views.Alignment/app.config
CATUI/trunk/Bio.Views.Alignment/images/alignment.ico
CATUI/trunk/Bio.Views.Alignment/images/bev_icon.png
CATUI/trunk/Bio.Views.Alignment/images/tax_icon.png
CATUI/trunk/Bio.Views.Structure.Editor/Bio.Views.Structure.Editor.csproj
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Actions/CreateStructureElementAction.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Actions/DeleteBasePairsFromRangeAction.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Actions/DeleteSelectedBasePairEditAction.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Actions/DeleteSelectedHelixAction.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Actions/EditStructureElementPropertiesAction.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Actions/ReloadStructureDrawingAction.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Actions/ResizeStructureElementAction.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Actions/RotateSelectedStructureElementAction.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Actions/SelectStructureElementContainingNucleotideAction.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Actions/SnapSelectedHelixToClosingBasePairAction.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Actions/SnapSelectedHelixToOpeningBasePairAction.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Actions/TranslateSelectedStructureElementAction.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Actions/UndoLastStructureModelEditAction.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Actions/UpdateStructureModelAction.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Algorithms/ExportDiagramToBPSeq.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Algorithms/ExportDiagramToCT.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Algorithms/ExportDiagramToRNAml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Algorithms/ExportDiagramToStrml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Algorithms/ExportDiagramToXRNA.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Algorithms/TemplateDiagram.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Behaviors/InheritingNumericTextBoxBehavior.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Commands/StructureEditorCommands.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Converters/ColorToSolidColorBrushConverter.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Converters/InheritingBasePairConnectorIsVisibleToStringConverter.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Converters/InheritingBasePairConnectorRenderingModeToStringConverter.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Converters/InheritingBrushConverter.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Converters/InheritingIsFilledToStringConverter.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Converters/InheritingNucleotideFontFamilyToStringConverter.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Converters/InheritingNucleotideFontStyleToStringConverter.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Converters/InheritingNucleotideFontWeightToStringConverter.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Converters/InheritingNucleotideRenderingModeToStringConverter.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Converters/NullBrushToTransparentConverter.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Converters/NullDoubleToDoubleConverter.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Converters/NullRenderingPropertyToEmptyStringConverter.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Converters/RadiansToDegreesConverter.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Converters/SolidColorBrushToColorConverter.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Data/BasePairVisualRenderingOptionsData.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Data/BasePairVisualRenderingOptionsDataCollection.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Data/EditableStructureModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Data/LocalNucleotideSequenceVector.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Data/NucleotideVisualRenderingOptionsData.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Data/NucleotideVisualRenderingOptionsDataCollection.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Data/StructureModelData.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Editing/BasePairVisualComponentPropertyContext.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Editing/EditingUtilities.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Editing/NucleotideVisualComponentPropertyContext.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Editing/SecondaryStructureDrawingPropertyContext.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Editing/StructureElementPropertyChangeSet.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Editing/StructureElementVisualComponentEditEventArgs.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Editing/StructureElementVisualComponentPropertyContext.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Options/BasePairVisualRenderingOptions.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Options/NamedColor.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Options/NucleotideVisualRenderingOptions.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Options/StructureDrawingVisualRenderingOptions.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/BasePairConnectorRenderingMode.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Interfaces/IDataDrivenDefaultStructureElementPropertyProvider.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Interfaces/IDraggableSecondaryStructureElement.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Interfaces/IRotateableSecondaryStructureElement.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Interfaces/IStructureElementVisualComponent.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/NucleotideRenderingMode.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Primitives/BasePairVector.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Primitives/HelixRectangle.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Primitives/NucleotideVector.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Primitives/StrandArc.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/SecondaryStructureDrawing.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/StructureDrawingManager.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/StructureElementTemplateSelector.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Visuals/BasePairDrawingVisual.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Visuals/BasePairStructureElementVisualComponent.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Visuals/BasePairStructureElementVisualComponentFactory.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Visuals/HelixDrawingVisual.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Visuals/HelixStructureElementVisualComponent.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Visuals/LoopDrawingVisual.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Visuals/LoopStructureElementVisualComponent.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Visuals/NucleotideDrawingVisual.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Visuals/NucleotideStructureElementVisualComponent.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Visuals/NucleotideStructureElementVisualComponentFactory.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Rendering/Visuals/RangeStructureElementVisualComponent.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Selection/BasePairSelectionGroup.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Selection/DomainSelectionGroup.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Selection/HelixSelectionGroup.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Selection/Interfaces/IStructureElementSelectionGroup.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Selection/LoopSelectionGroup.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Selection/NucleotideSelectionGroup.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Selection/RangeSelectionGroup.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Selection/StructureElementSelectionGroupBase.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Selection/StructureElementSelectionMode.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Tools/BasePairCreationTool.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Tools/HelixCreationTool.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Tools/Interfaces/IStructureDrawingTool.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Tools/SecondaryStructureDrawingTool.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Tools/StructureElementDrawingTool.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Tools/StructureElementRotateTool.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Tools/StructureElementSelectionTool.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Validations/PositiveOrZeroValueAttribute.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Validations/PositiveValueAttribute.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Validations/ValueWithinRangeAttribute.cs
CATUI/trunk/Bio.Views.Structure.Editor/Internal/Viewport/DrawingViewportManager.cs
CATUI/trunk/Bio.Views.Structure.Editor/Linking/LinkedSecondaryStructureEditorProxy.cs
CATUI/trunk/Bio.Views.Structure.Editor/Properties/AssemblyInfo.cs
CATUI/trunk/Bio.Views.Structure.Editor/Properties/Resources.Designer.cs
CATUI/trunk/Bio.Views.Structure.Editor/Properties/Resources.resx
CATUI/trunk/Bio.Views.Structure.Editor/Properties/Settings.Designer.cs
CATUI/trunk/Bio.Views.Structure.Editor/Properties/Settings.settings
CATUI/trunk/Bio.Views.Structure.Editor/Resources/DataTemplates.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Resources/DataTemplates.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Settings.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/BasePairVisualRenderingDefaultsViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/BasePairVisualRenderingOptionsViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/BuildBioEntityTypeFilterViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/ConfigureStructureElementVisualPropertiesViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/NucleotideVisualRenderingDefaultsViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/NucleotideVisualRenderingOptionsViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/PromptForAngleViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/PromptForNewBasePairViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/PromptForNewHelixViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/PromptForPositiveValueViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/PromptForRotationViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/PromptForSizingViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/PromptForStructureElementTranslationToViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/PromptForValueWithinRangeViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/SecondaryStructureEditorBirdsEyeViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/SecondaryStructureEditorViewMessages.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/SecondaryStructureEditorViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/SecondaryStructureEditorViewModelCreator.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/SecondaryStructureEditorVisualComponentInspectorViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/SecondaryStructureModelSelectionViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/SelectBasePairForRenderingDefaultsViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/SelectNucleotideForRenderingDefaultsViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/StructureElementBrushEditorViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/ViewModels/TemplateDiagramTargetSequenceSelectionViewModel.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/BuildBasePairTypeFilterEditor.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/BuildBasePairTypeFilterEditor.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/BuildNucleotideTypeFilterEditor.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/BuildNucleotideTypeFilterEditor.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/ConfigureStructureElementVisualPropertiesEditor.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/ConfigureStructureElementVisualPropertiesEditor.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/DefaultBasePairRenderingOptionsEditor.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/DefaultBasePairRenderingOptionsEditor.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/DefaultNucleotideRenderingOptionsEditor.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/DefaultNucleotideRenderingOptionsEditor.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/PromptForNewBasePairEditor.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/PromptForNewBasePairEditor.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/PromptForNewHelixEditor.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/PromptForNewHelixEditor.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/PromptForSizingEditor.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/PromptForSizingEditor.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/PromptForStructureElementTranslationEditor.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/PromptForStructureElementTranslationEditor.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/PromptForValueEditor.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/PromptForValueEditor.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/SecondaryStructureBirdsEyeViewer.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/SecondaryStructureBirdsEyeViewer.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/SecondaryStructureEditor.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/SecondaryStructureEditor.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/SecondaryStructureEditorVisualComponentInspector.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/SecondaryStructureEditorVisualComponentInspector.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/SecondaryStructureEntitySelector.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/SecondaryStructureEntitySelector.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/SelectBasePairForRenderingDefaultsEditor.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/SelectBasePairForRenderingDefaultsEditor.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/SelectNucleotideForRenderingDefaultsEditor.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/SelectNucleotideForRenderingDefaultsEditor.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/StructureElementBrushEditor.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/StructureElementBrushEditor.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/Views/TemplateDiagramTargetSequenceSelector.xaml
CATUI/trunk/Bio.Views.Structure.Editor/Views/TemplateDiagramTargetSequenceSelector.xaml.cs
CATUI/trunk/Bio.Views.Structure.Editor/app.config
CATUI/trunk/Bio.Views.Structure.Editor/images/bev_icon.png
CATUI/trunk/Bio.Views.Structure.Editor/images/secondaryStruct.ico
CATUI/trunk/Bio.Views/Bio.Views.csproj
CATUI/trunk/Bio.Views/BioViewAttribute.cs
CATUI/trunk/Bio.Views/BioViewProviderFactory.cs
CATUI/trunk/Bio.Views/Interfaces/IBioViewProvider.cs
CATUI/trunk/Bio.Views/Interfaces/ISidebarViewItem.cs
CATUI/trunk/Bio.Views/MenuItem.cs
CATUI/trunk/Bio.Views/Properties/AssemblyInfo.cs
CATUI/trunk/Bio.Views/Utilities/DragDropHelper.cs
CATUI/trunk/Bio.Views/Utilities/DraggedAdorner.cs
CATUI/trunk/Bio.Views/Utilities/InsertionAdorner.cs
CATUI/trunk/Bio.Views/Utilities/Utilities.cs
CATUI/trunk/Bio.Views/ViewModels/BioViewModel.cs
CATUI/trunk/Bio.Views/ViewModels/SidebarViewModel.cs
CATUI/trunk/Bio.Views/ViewModels/ViewMessages.cs
CATUI/trunk/Bio.Views/Views/BioFloatingWindow.xaml
CATUI/trunk/Bio.Views/Views/BioFloatingWindow.xaml.cs
CATUI/trunk/Browser/App.config
CATUI/trunk/Browser/App.xaml
CATUI/trunk/Browser/App.xaml.cs
CATUI/trunk/Browser/BioBrowser.csproj
CATUI/trunk/Browser/BioBrowser.csproj.user
CATUI/trunk/Browser/BioBrowser.pfx
CATUI/trunk/Browser/Listener/CommandLineListener.cs
CATUI/trunk/Browser/MainWindow.xaml
CATUI/trunk/Browser/MainWindow.xaml.cs
CATUI/trunk/Browser/Models/BioDataFile.cs
CATUI/trunk/Browser/Models/Extensions.cs
CATUI/trunk/Browser/Models/MefManager.cs
CATUI/trunk/Browser/Models/Workspace.cs
CATUI/trunk/Browser/Program.cs
CATUI/trunk/Browser/Properties/AssemblyInfo.cs
CATUI/trunk/Browser/Properties/Resources.Designer.cs
CATUI/trunk/Browser/Properties/Resources.resx
CATUI/trunk/Browser/Properties/Settings.Designer.cs
CATUI/trunk/Browser/Properties/Settings.settings
CATUI/trunk/Browser/ViewModels/AddOpenFileViewModel.cs
CATUI/trunk/Browser/ViewModels/MainViewModel.cs
CATUI/trunk/Browser/ViewModels/OpenBioDataViewModel.cs
CATUI/trunk/Browser/ViewModels/OpenBioViewModel.cs
CATUI/trunk/Browser/ViewModels/SelectionViewModel.cs
CATUI/trunk/Browser/ViewModels/ViewMessages.cs
CATUI/trunk/Browser/ViewModels/WorkspaceViewModel.cs
CATUI/trunk/Browser/Views/AboutBox.xaml
CATUI/trunk/Browser/Views/AboutBox.xaml.cs
CATUI/trunk/Browser/Views/AddOpenFileView.xaml
CATUI/trunk/Browser/Views/AddOpenFileView.xaml.cs
CATUI/trunk/Browser/images/alignment.ico
CATUI/trunk/Browser/images/catui.ico
CATUI/trunk/Browser/images/molecule.ico
CATUI/trunk/Browser/images/secondaryStruct.ico
CATUI/trunk/Browser/images/splashScreen-600x256.png
CATUI/trunk/Browser/images/workspace.ico
CATUI/trunk/Dependencies/Expression.Samples.Interactivity.dll
CATUI/trunk/Dependencies/JulMar.Wpf.Helpers.chm
CATUI/trunk/Dependencies/JulMar.Wpf.Helpers.dll
CATUI/trunk/Dependencies/JulMar.Wpf.Helpers.pdb
CATUI/trunk/Dependencies/JulMar.Wpf.Helpers.xml
CATUI/trunk/Dependencies/Julmar.Wpf.Behaviors.dll
CATUI/trunk/Dependencies/Julmar.Wpf.Behaviors.pdb
CATUI/trunk/Dependencies/Julmar.Wpf.Behaviors.xml
CATUI/trunk/Dependencies/LabelRNA.dll
CATUI/trunk/Dependencies/LabelRNA.pdb
CATUI/trunk/Dependencies/Microsoft.Expression.Interactions.dll
CATUI/trunk/Dependencies/Microsoft.Expression.Interactions.xml
CATUI/trunk/Dependencies/ShaderEffectLibrary.dll
CATUI/trunk/Dependencies/System.Windows.Interactivity.dll
CATUI/trunk/Dependencies/System.Windows.Interactivity.xml
CATUI/trunk/RNA.sln
CATUI/trunk/RNA.suo
rCAD/branches/version1.00/Alignment/AE2SequenceAlignmentLoader.cs
rCAD/branches/version1.00/Alignment/Alignment.csproj
rCAD/branches/version1.00/Alignment/CRWSequenceAlignmentFormatTags.cs
rCAD/branches/version1.00/Alignment/CRWSequenceAlignmentLoader.cs
rCAD/branches/version1.00/Alignment/CRWSequenceAlignmentWriter.cs
rCAD/branches/version1.00/Alignment/ISequenceAlignmentLoader.cs
rCAD/branches/version1.00/Alignment/ISequenceAlignmentWriter.cs
rCAD/branches/version1.00/Alignment/Properties/AssemblyInfo.cs
rCAD/branches/version1.00/Alignment/SequenceAlignment.cs
rCAD/branches/version1.00/Alignment/SequenceMetadata.cs
rCAD/branches/version1.00/Alignment/StructureModel.cs
rCAD/branches/version1.00/Alignment32/AE2SequenceAlignmentLoader.cs
rCAD/branches/version1.00/Alignment32/Alignment32.csproj
rCAD/branches/version1.00/Alignment32/CRWSequenceAlignmentFormatTags.cs
rCAD/branches/version1.00/Alignment32/CRWSequenceAlignmentLoader.cs
rCAD/branches/version1.00/Alignment32/CRWSequenceAlignmentWriter.cs
rCAD/branches/version1.00/Alignment32/ISequenceAlignmentLoader.cs
rCAD/branches/version1.00/Alignment32/ISequenceAlignmentWriter.cs
rCAD/branches/version1.00/Alignment32/Properties/AssemblyInfo.cs
rCAD/branches/version1.00/Alignment32/SequenceAlignment.cs
rCAD/branches/version1.00/Alignment32/SequenceMetadata.cs
rCAD/branches/version1.00/Alignment32/StructureModel.cs
rCAD/branches/version1.00/AlignmentBulkLoader/AlignmentBulkLoader.database
rCAD/branches/version1.00/AlignmentBulkLoader/AlignmentBulkLoader.dtproj
rCAD/branches/version1.00/AlignmentBulkLoader/AlignmentBulkLoader.dtproj.user
rCAD/branches/version1.00/AlignmentBulkLoader/LoadNewAlignment.dtsx
rCAD/branches/version1.00/AlignmentLoader/AlignmentLoader.csproj
rCAD/branches/version1.00/AlignmentLoader/Loader.cs
rCAD/branches/version1.00/AlignmentLoader/Mapper.cs
rCAD/branches/version1.00/AlignmentLoader/Properties/AssemblyInfo.cs
rCAD/branches/version1.00/AlignmentLoader/Properties/Settings.Designer.cs
rCAD/branches/version1.00/AlignmentLoader/Properties/Settings.settings
rCAD/branches/version1.00/AlignmentLoader/SequenceMappingData.cs
rCAD/branches/version1.00/AlignmentLoader/app.config
rCAD/branches/version1.00/AlignmentLoader/rCAD.dbml
rCAD/branches/version1.00/AlignmentLoader/rCAD.dbml.layout
rCAD/branches/version1.00/AlignmentLoader/rCAD.designer.cs
rCAD/branches/version1.00/AlignmentLoader32/AlignmentLoader32.csproj
rCAD/branches/version1.00/AlignmentLoader32/Loader.cs
rCAD/branches/version1.00/AlignmentLoader32/Mapper.cs
rCAD/branches/version1.00/AlignmentLoader32/Properties/AssemblyInfo.cs
rCAD/branches/version1.00/AlignmentLoader32/Properties/Settings.Designer.cs
rCAD/branches/version1.00/AlignmentLoader32/Properties/Settings.settings
rCAD/branches/version1.00/AlignmentLoader32/SequenceMappingData.cs
rCAD/branches/version1.00/AlignmentLoader32/app.config
rCAD/branches/version1.00/AlignmentLoader32/rCAD.dbml
rCAD/branches/version1.00/AlignmentLoader32/rCAD.dbml.layout
rCAD/branches/version1.00/AlignmentLoader32/rCAD.designer.cs
rCAD/branches/version1.00/AlignmentLoaderDialog/AlignmentLoaderDialog.csproj
rCAD/branches/version1.00/AlignmentLoaderDialog/AlignmentType.cs
rCAD/branches/version1.00/AlignmentLoaderDialog/App.xaml
rCAD/branches/version1.00/AlignmentLoaderDialog/App.xaml.cs
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rCAD/trunk/ManagedLabelRNA/ManagedLabelRNA.cpp
rCAD/trunk/ManagedLabelRNA/ManagedLabelRNA.h
rCAD/trunk/ManagedLabelRNA/ManagedLabelRNA.vcproj
rCAD/trunk/ManagedLabelRNA/ManagedLabelRNA.vcproj.LAB-Desktop-PC.LAB-Desktop.user
rCAD/trunk/ManagedLabelRNA/RNA.cc
rCAD/trunk/ManagedLabelRNA/RNA.h
rCAD/trunk/ManagedLabelRNA/Random.cc
rCAD/trunk/ManagedLabelRNA/Random.h
rCAD/trunk/ManagedLabelRNA/ReadMe.txt
rCAD/trunk/ManagedLabelRNA/Stdafx.cpp
rCAD/trunk/ManagedLabelRNA/Stdafx.h
rCAD/trunk/ManagedLabelRNA/app.ico
rCAD/trunk/ManagedLabelRNA/app.rc
rCAD/trunk/ManagedLabelRNA/exceptions.h
rCAD/trunk/ManagedLabelRNA/resource.h
rCAD/trunk/ManagedLabelRNA/util.cc
rCAD/trunk/ManagedLabelRNA/util.h
rCAD/trunk/ManagedLabelRNA32/Array.h
rCAD/trunk/ManagedLabelRNA32/AssemblyInfo.cpp
rCAD/trunk/ManagedLabelRNA32/Bag.h
rCAD/trunk/ManagedLabelRNA32/ManagedLabelRNA.cpp
rCAD/trunk/ManagedLabelRNA32/ManagedLabelRNA.h
rCAD/trunk/ManagedLabelRNA32/ManagedLabelRNA32.vcproj
rCAD/trunk/ManagedLabelRNA32/ManagedLabelRNA32.vcproj.LAB-Desktop-PC.LAB-Desktop.user
rCAD/trunk/ManagedLabelRNA32/RNA.cc
rCAD/trunk/ManagedLabelRNA32/RNA.h
rCAD/trunk/ManagedLabelRNA32/Random.cc
rCAD/trunk/ManagedLabelRNA32/Random.h
rCAD/trunk/ManagedLabelRNA32/ReadMe.txt
rCAD/trunk/ManagedLabelRNA32/Stdafx.cpp
rCAD/trunk/ManagedLabelRNA32/Stdafx.h
rCAD/trunk/ManagedLabelRNA32/app.ico
rCAD/trunk/ManagedLabelRNA32/app.rc
rCAD/trunk/ManagedLabelRNA32/exceptions.h
rCAD/trunk/ManagedLabelRNA32/resource.h
rCAD/trunk/ManagedLabelRNA32/util.cc
rCAD/trunk/ManagedLabelRNA32/util.h
rCAD/trunk/TaxonomyLoader/Names.cs
rCAD/trunk/TaxonomyLoader/Nodes.cs
rCAD/trunk/TaxonomyLoader/Program.cs
rCAD/trunk/TaxonomyLoader/Properties/AssemblyInfo.cs
rCAD/trunk/TaxonomyLoader/TaxonomyLoader.csproj
rCAD/trunk/TaxonomyUpdater/Properties/AssemblyInfo.cs
rCAD/trunk/TaxonomyUpdater/TaxonomyUpdater.csproj
rCAD/trunk/TaxonomyUpdater/Updater.cs
rCAD/trunk/TaxonomyUpdaterDialog/App.xaml
rCAD/trunk/TaxonomyUpdaterDialog/App.xaml.cs
rCAD/trunk/TaxonomyUpdaterDialog/Images/alignmentDb.ico
rCAD/trunk/TaxonomyUpdaterDialog/MainWindow.xaml
rCAD/trunk/TaxonomyUpdaterDialog/MainWindow.xaml.cs
rCAD/trunk/TaxonomyUpdaterDialog/Properties/AssemblyInfo.cs
rCAD/trunk/TaxonomyUpdaterDialog/Properties/Resources.Designer.cs
rCAD/trunk/TaxonomyUpdaterDialog/Properties/Resources.resx
rCAD/trunk/TaxonomyUpdaterDialog/Properties/Settings.Designer.cs
rCAD/trunk/TaxonomyUpdaterDialog/Properties/Settings.settings
rCAD/trunk/TaxonomyUpdaterDialog/Resources/DataTemplates.xaml
rCAD/trunk/TaxonomyUpdaterDialog/Resources/DataTemplates.xaml.cs
rCAD/trunk/TaxonomyUpdaterDialog/TaxonomyUpdaterDialog.csproj
rCAD/trunk/TaxonomyUpdaterDialog/ViewModels/TaxonomyUpdaterViewModel.cs
rCAD/trunk/TaxonomyUpdaterFiles/BatchOperations/HandleDeletedNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/BatchOperations/HandleMergedNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/BatchOperations/HandleMovedNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/BatchOperations/HandleMovedOurNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/BatchOperations/HandleNameClasses.sql
rCAD/trunk/TaxonomyUpdaterFiles/BatchOperations/IdentifyDeletedOurNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/BatchOperations/IdentifyMergedOurNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/BatchOperations/InsertOurNodesInRNAJOINTaxonomyMerged.sql
rCAD/trunk/TaxonomyUpdaterFiles/BatchOperations/PopulateRNAJOINTaxonomyMerged.sql
rCAD/trunk/TaxonomyUpdaterFiles/BatchOperations/PopulateRNAJOINTaxonomyOuterNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/BatchOperations/PopulateTaxonomyNamesOrdered.sql
rCAD/trunk/TaxonomyUpdaterFiles/BatchOperations/TransactionallyPropagateJoin.sql
rCAD/trunk/TaxonomyUpdaterFiles/Bin/DumpAffectedSequences.bat
rCAD/trunk/TaxonomyUpdaterFiles/Bin/DumpNCBIOrphans.bat
rCAD/trunk/TaxonomyUpdaterFiles/Bin/DumpRNAJOINTables.bat
rCAD/trunk/TaxonomyUpdaterFiles/BulkImportFormatFiles/bulkload.deleted.xml
rCAD/trunk/TaxonomyUpdaterFiles/BulkImportFormatFiles/bulkload.merged.xml
rCAD/trunk/TaxonomyUpdaterFiles/BulkImportFormatFiles/bulkload.names.xml
rCAD/trunk/TaxonomyUpdaterFiles/BulkImportFormatFiles/bulkload.nodes.xml
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateNCBIDeletedNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateNCBIMergedNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateNCBITempNames.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateNCBITempNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINAlternateNames.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINAlternateNamesArchived.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINDeletedNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINDeletedParentsToOurNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINMergedNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINMergedParentsToOurNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINMergedSequences.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINMovedNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINMovedSequences.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINNameClasses.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINNameClassesArchived.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINOrphanedSequences.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINOurNodesForTaxonomyMerged.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINTaxonomyArchived.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINTaxonomyMerged.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINTaxonomyNames.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINTaxonomyNamesArchived.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINTaxonomyOuterNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/CreateTablesFiles/CreateRNAJOINTempTaxonomyMappedSequences.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropNCBIDeletedNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropNCBIMergedNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropNCBITempNames.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropNCBITempNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINAlternateNames.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINAlternateNamesArchived.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINDeletedNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINDeletedParentsToOurNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINMergedNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINMergedParentsToOurNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINMergedSequences.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINMovedNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINMovedSequences.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINNameClasses.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINNameClassesArchived.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINOrphanedSequences.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINOurNodesForTaxonomyMerged.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINTaxonomyArchived.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINTaxonomyMerged.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINTaxonomyNames.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINTaxonomyNamesArchived.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINTaxonomyOuterNodes.sql
rCAD/trunk/TaxonomyUpdaterFiles/DropTablesFiles/DropRNAJOINTempTaxonomyMappedSequences.sql
rCAD/trunk/TaxonomyUpdaterFiles/TaxonomyUpdater.xml
rCAD/trunk/Utilities.Data/Properties/AssemblyInfo.cs
rCAD/trunk/Utilities.Data/Utilities.Data.csproj
rCAD/trunk/Utilities.Data/rCADConnection.cs
rCAD/trunk/Utilities.Database/ConstructSequence.cs
rCAD/trunk/Utilities.Database/Properties/AssemblyInfo.cs
rCAD/trunk/Utilities.Database/Test Scripts/Test.sql
rCAD/trunk/Utilities.Database/Utilities.Database.csproj
rCAD/trunk/rCAD.Utilities.sln
rCAD/trunk/rCAD.Utilities.suo
rCAD/trunk/rCAD.Utilities.x64/rCAD.Utilities.x64.vdproj
rCAD/trunk/rCAD.Utilities.x86/rCAD.Utilities.x86.vdproj
rCAD/trunk/rCADLoader/InstallRCAD.dtsx
rCAD/trunk/rCADLoader/rCADLoader.database
rCAD/trunk/rCADLoader/rCADLoader.dtproj
rCAD/trunk/rCADLoader/rCADLoader.dtproj.user
rCAD/trunk/rCADLoaderDialog/App.xaml
rCAD/trunk/rCADLoaderDialog/App.xaml.cs
rCAD/trunk/rCADLoaderDialog/Images/alignmentDb.ico
rCAD/trunk/rCADLoaderDialog/MainWindow.xaml
rCAD/trunk/rCADLoaderDialog/MainWindow.xaml.cs
rCAD/trunk/rCADLoaderDialog/Properties/AssemblyInfo.cs
rCAD/trunk/rCADLoaderDialog/Properties/Resources.Designer.cs
rCAD/trunk/rCADLoaderDialog/Properties/Resources.resx
rCAD/trunk/rCADLoaderDialog/Properties/Settings.Designer.cs
rCAD/trunk/rCADLoaderDialog/Properties/Settings.settings
rCAD/trunk/rCADLoaderDialog/Resources/DataTemplates.xaml
rCAD/trunk/rCADLoaderDialog/Resources/DataTemplates.xaml.cs
rCAD/trunk/rCADLoaderDialog/ViewModels/LoaderViewModel.cs
rCAD/trunk/rCADLoaderDialog/rCADLoaderDialog.csproj
rCAD/trunk/rCADLoaderFiles/BatchOperations/PopulateTaxonomyNamesOrdered.sql
rCAD/trunk/rCADLoaderFiles/CreateIndicesFiles/CreateNCIndexAlignmentData_AlnID_SeqID_PhysicalColumnNumber.sql
rCAD/trunk/rCADLoaderFiles/CreateIndicesFiles/CreateNCIndexSequenceMain_TaxID_SeqTypeID_LocationID.sql
rCAD/trunk/rCADLoaderFiles/CreateIndicesFiles/CreateNCIndexTaxonomy_ParentTaxID.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateAlignment.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateAlignmentColumn.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateAlignmentData.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateAlignmentSequence.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateAlternateNames.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateCellLocationInfo.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateNameClasses.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateNextAlnID.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateNextSeqID.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateSecondaryStructureBasePairs.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateSecondaryStructureDrawings.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateSecondaryStructureExtentTypes.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateSecondaryStructureExtents.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateSequenceAccession.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateSequenceMain.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateSequenceType.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateTaxonomy.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateTaxonomyNames.sql
rCAD/trunk/rCADLoaderFiles/CreateTablesFiles/CreateTaxonomyNamesOrdered.sql
rCAD/trunk/rCADLoaderFiles/CreateUDFFiles/CreateSelectAllSequencesForTaxonomyByScientificNameUDF.sql
rCAD/trunk/rCADLoaderFiles/CreateUDFFiles/CreateSelectAllSequencesForTaxonomyByTaxIDUDF.sql
rCAD/trunk/rCADLoaderFiles/CreateViewsFiles/CreateViewAlignmentGrid.sql
rCAD/trunk/rCADLoaderFiles/CreateViewsFiles/CreateViewAlignmentGridUngapped.sql
rCAD/trunk/rCADLoaderFiles/Evolutionary.Relationships/Bulkload.AlternateNames.xml
rCAD/trunk/rCADLoaderFiles/Evolutionary.Relationships/Bulkload.NameClasses.xml
rCAD/trunk/rCADLoaderFiles/Evolutionary.Relationships/Bulkload.Taxonomy.xml
rCAD/trunk/rCADLoaderFiles/Evolutionary.Relationships/Bulkload.TaxonomyNames.xml
rCAD/trunk/rCADLoaderFiles/Evolutionary.Relationships/NameClasses.dat
rCAD/trunk/rCADLoaderFiles/Sequence.Metadata/Bulkload.CellLocationInfo.xml
rCAD/trunk/rCADLoaderFiles/Sequence.Metadata/Bulkload.SequenceType.xml
rCAD/trunk/rCADLoaderFiles/Sequence.Metadata/CellLocationInfo.dat
rCAD/trunk/rCADLoaderFiles/Sequence.Metadata/SequenceType.dat
rCAD/trunk/rCADLoaderFiles/Structural.Relationships/Bulkload.SecondaryStructureExtentTypes.xml
rCAD/trunk/rCADLoaderFiles/Structural.Relationships/SecondaryStructureExtentTypes.dat
rCAD/trunk/rCADLoaderFiles/rCADLoader.xml